RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RGPD5Q99666 1765 aa32.31■■■□□ 2.76
SSBP4-203ENST00000593641 WDR17Q8IZU2 1322 aa32.29■■■□□ 2.76
SSBP4-203ENST00000593641 DDB1Q16531 1140 aa32.29■■■□□ 2.76
SSBP4-203ENST00000593641 KTN1Q86UP2 1357 aaKnown RBP32.29■■■□□ 2.76
SSBP4-203ENST00000593641 MON2Q7Z3U7 1717 aa32.29■■■□□ 2.76
SSBP4-203ENST00000593641 PEAK1Q9H792 1746 aa32.29■■■□□ 2.76
SSBP4-203ENST00000593641 SBF2Q86WG5 1849 aa32.28■■■□□ 2.76
SSBP4-203ENST00000593641 SOX12O15370 315 aa32.28■■■□□ 2.76
SSBP4-203ENST00000593641 NBPF14Q5TI25 921 aa32.28■■■□□ 2.76
SSBP4-203ENST00000593641 ARHGEF25Q86VW2 580 aa32.27■■■□□ 2.76
SSBP4-203ENST00000593641 AXIN2Q9Y2T1 843 aa32.27■■■□□ 2.76
SSBP4-203ENST00000593641 SBNO2Q9Y2G9 1366 aa32.27■■■□□ 2.76
SSBP4-203ENST00000593641 CSB-PGBD3P0DP91 1061 aa32.24■■■□□ 2.75
SSBP4-203ENST00000593641 CDCA7Q9BWT1 371 aaPredicted RBP32.24■■■□□ 2.75
SSBP4-203ENST00000593641 RGPD3A6NKT7 1758 aaPredicted RBP32.23■■■□□ 2.75
SSBP4-203ENST00000593641 RGPD4Q7Z3J3 1758 aa32.23■■■□□ 2.75
SSBP4-203ENST00000593641 NFAT5O94916 1531 aa32.23■■■□□ 2.75
SSBP4-203ENST00000593641 CARD11Q9BXL7 1154 aa32.23■■■□□ 2.75
SSBP4-203ENST00000593641 ABCC6O95255 1503 aa32.21■■■□□ 2.75
SSBP4-203ENST00000593641 CARD10Q9BWT7 1032 aa32.18■■■□□ 2.74
SSBP4-203ENST00000593641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.17■■■□□ 2.74
SSBP4-203ENST00000593641 TONSLQ96HA7 1378 aa32.17■■■□□ 2.74
SSBP4-203ENST00000593641 USP54Q70EL1 1684 aa32.16■■■□□ 2.74
SSBP4-203ENST00000593641 TMC1Q8TDI8 760 aa32.15■■■□□ 2.74
SSBP4-203ENST00000593641 PLSCR1O15162 318 aa32.14■■■□□ 2.74
SSBP4-203ENST00000593641 BCL11BQ9C0K0 894 aaPredicted RBP32.14■■■□□ 2.74
SSBP4-203ENST00000593641 USP31Q70CQ4 1352 aa32.14■■■□□ 2.74
SSBP4-203ENST00000593641 CCDC7Q96M83 1385 aa32.14■■■□□ 2.74
SSBP4-203ENST00000593641 LTN1O94822 1766 aa32.13■■■□□ 2.73
SSBP4-203ENST00000593641 HDGFL2Q7Z4V5 671 aaPredicted RBP32.13■■■□□ 2.73
SSBP4-203ENST00000593641 MARCH10Q8NA82 808 aaPredicted RBP32.13■■■□□ 2.73
SSBP4-203ENST00000593641 CD163L1Q9NR16 1453 aa32.12■■■□□ 2.73
SSBP4-203ENST00000593641 BCL9O00512 1426 aa32.12■■■□□ 2.73
SSBP4-203ENST00000593641 EXOC5O00471 708 aa32.09■■■□□ 2.73
SSBP4-203ENST00000593641 NME9Q86XW9 330 aa32.09■■■□□ 2.73
SSBP4-203ENST00000593641 TNS2Q63HR2 1409 aa32.07■■■□□ 2.72
SSBP4-203ENST00000593641 EDC4Q6P2E9 1401 aaKnown RBP32.07■■■□□ 2.72
SSBP4-203ENST00000593641 SLC12A5Q9H2X9 1139 aa32.06■■■□□ 2.72
SSBP4-203ENST00000593641 SPON1Q9HCB6 807 aa32.06■■■□□ 2.72
SSBP4-203ENST00000593641 TERF2IPQ9NYB0 399 aa32.06■■■□□ 2.72
SSBP4-203ENST00000593641 ERBB3P21860 1342 aa32.05■■■□□ 2.72
SSBP4-203ENST00000593641 PTF1AQ7RTS3 328 aa32.05■■■□□ 2.72
SSBP4-203ENST00000593641 PPP1R1BQ9UD71 204 aaPredicted RBP32.03■■■□□ 2.72
SSBP4-203ENST00000593641 KCNQ2O43526 872 aa32.02■■■□□ 2.72
SSBP4-203ENST00000593641 NLRP2Q9NX02 1062 aa32.02■■■□□ 2.72
SSBP4-203ENST00000593641 A0A1W2PP64 1363 aa32.02■■■□□ 2.72
SSBP4-203ENST00000593641 KAT6BQ8WYB5 2073 aa32.01■■■□□ 2.72
SSBP4-203ENST00000593641 PUS7Q96PZ0 661 aaKnown RBP32.01■■■□□ 2.71
SSBP4-203ENST00000593641 ANO8Q9HCE9 1232 aaPredicted RBP32■■■□□ 2.71
SSBP4-203ENST00000593641 NHSQ6T4R5 1651 aa31.98■■■□□ 2.71
SSBP4-203ENST00000593641 CASZ1Q86V15 1759 aa31.97■■■□□ 2.71
SSBP4-203ENST00000593641 NINLQ9Y2I6 1382 aa31.96■■■□□ 2.71
SSBP4-203ENST00000593641 IL2RBP14784 551 aa31.96■■■□□ 2.71
SSBP4-203ENST00000593641 ANKRD24Q8TF21 1146 aa31.96■■■□□ 2.71
SSBP4-203ENST00000593641 PROM2Q8N271 834 aa31.95■■■□□ 2.71
SSBP4-203ENST00000593641 TXNRD1Q16881 649 aa31.94■■■□□ 2.7
SSBP4-203ENST00000593641 FAM208AQ9UK61 1670 aaKnown RBP31.92■■■□□ 2.7
SSBP4-203ENST00000593641 SLC24A1O60721 1099 aa31.92■■■□□ 2.7
SSBP4-203ENST00000593641 ST20-MTHFSA0A0A6YYL1 179 aa31.91■■■□□ 2.7
SSBP4-203ENST00000593641 STK32BQ9NY57 414 aa31.91■■■□□ 2.7
SSBP4-203ENST00000593641 TESK2Q96S53 571 aa31.9■■■□□ 2.7
SSBP4-203ENST00000593641 ACSBG1Q96GR2 724 aa31.89■■■□□ 2.7
SSBP4-203ENST00000593641 BTAF1O14981 1849 aa31.87■■■□□ 2.69
SSBP4-203ENST00000593641 IP6K1Q92551 441 aa31.87■■■□□ 2.69
SSBP4-203ENST00000593641 DCAF8L1A6NGE4 600 aa31.86■■■□□ 2.69
SSBP4-203ENST00000593641 COG3Q96JB2 828 aa31.86■■■□□ 2.69
SSBP4-203ENST00000593641 SLC15A2Q16348 729 aa31.85■■■□□ 2.69
SSBP4-203ENST00000593641 PDGFDQ9GZP0 370 aaPredicted RBP31.85■■■□□ 2.69
SSBP4-203ENST00000593641 ZBTB7AO95365 584 aa31.84■■■□□ 2.69
SSBP4-203ENST00000593641 LTV1Q96GA3 475 aaPredicted RBP31.83■■■□□ 2.69
SSBP4-203ENST00000593641 ANKRD36BQ8N2N9 1353 aa31.81■■■□□ 2.68
SSBP4-203ENST00000593641 MYOM1P52179 1685 aa31.8■■■□□ 2.68
SSBP4-203ENST00000593641 MAP3K19Q56UN5 1328 aa31.78■■■□□ 2.68
SSBP4-203ENST00000593641 AMPHP49418 695 aa31.78■■■□□ 2.68
SSBP4-203ENST00000593641 YY1P25490 414 aa31.77■■■□□ 2.68
SSBP4-203ENST00000593641 ATF5Q9Y2D1 282 aaPredicted RBP31.77■■■□□ 2.68
SSBP4-203ENST00000593641 PAPPAQ13219 1627 aa31.77■■■□□ 2.68
SSBP4-203ENST00000593641 HOXC9P31274 260 aa31.76■■■□□ 2.67
SSBP4-203ENST00000593641 TMF1P82094 1093 aa31.76■■■□□ 2.67
SSBP4-203ENST00000593641 DDX54Q8TDD1 881 aaKnown RBP31.75■■■□□ 2.67
SSBP4-203ENST00000593641 USP47Q96K76 1375 aa31.75■■■□□ 2.67
SSBP4-203ENST00000593641 RGPD2P0DJD1 1756 aa31.75■■■□□ 2.67
SSBP4-203ENST00000593641 PTGER2P43116 358 aa31.74■■■□□ 2.67
SSBP4-203ENST00000593641 MTFR1LQ9H019 292 aa31.74■■■□□ 2.67
SSBP4-203ENST00000593641 TRIM26Q12899 539 aaPredicted RBP31.73■■■□□ 2.67
SSBP4-203ENST00000593641 RTL1A6NKG5 1358 aa31.72■■■□□ 2.67
SSBP4-203ENST00000593641 FBLN1P23142 703 aa31.7■■■□□ 2.67
SSBP4-203ENST00000593641 DOT1LQ8TEK3 1739 aa31.69■■■□□ 2.66
SSBP4-203ENST00000593641 KIF20BQ96Q89 1820 aa31.68■■■□□ 2.66
SSBP4-203ENST00000593641 SHANK3Q9BYB0 1731 aa31.67■■■□□ 2.66
SSBP4-203ENST00000593641 SMG6Q86US8 1419 aaKnown RBP31.66■■■□□ 2.66
SSBP4-203ENST00000593641 RRS1Q15050 365 aaKnown RBP31.66■■■□□ 2.66
SSBP4-203ENST00000593641 CDCA8Q53HL2 280 aa31.66■■■□□ 2.66
SSBP4-203ENST00000593641 SYTL4Q96C24 671 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-203ENST00000593641 GGNBP2Q9H3C7 697 aa31.66■■■□□ 2.66
SSBP4-203ENST00000593641 FYB1O15117 783 aa31.65■■■□□ 2.66
SSBP4-203ENST00000593641 SLC27A3Q5K4L6 730 aa31.65■■■□□ 2.66
SSBP4-203ENST00000593641 LRRC4BQ9NT99 713 aa31.65■■■□□ 2.66
SSBP4-203ENST00000593641 MEGF6O75095 1541 aa31.65■■■□□ 2.66
SSBP4-203ENST00000593641 ZNF827Q17R98 1081 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms