RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 NR1H3Q13133 447 aa10.51□□□□□ -0.73
FARP1-208ENST00000593548 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
FARP1-208ENST00000593548 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
FARP1-208ENST00000593548 GPR37L1O60883 481 aa10.5□□□□□ -0.73
FARP1-208ENST00000593548 ZIC2O95409 532 aaPredicted RBP10.5□□□□□ -0.73
FARP1-208ENST00000593548 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
FARP1-208ENST00000593548 CCDC116Q8IYX3 515 aa10.5□□□□□ -0.73
FARP1-208ENST00000593548 CRIPAKQ8N1N5 446 aa10.5□□□□□ -0.73
FARP1-208ENST00000593548 RAD21O60216 631 aa10.49□□□□□ -0.73
FARP1-208ENST00000593548 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
FARP1-208ENST00000593548 ITPKCQ96DU7 683 aa10.48□□□□□ -0.73
FARP1-208ENST00000593548 ZFAND3Q9H8U3 227 aa10.48□□□□□ -0.73
FARP1-208ENST00000593548 BMP1P13497 986 aa10.47□□□□□ -0.73
FARP1-208ENST00000593548 TIMP2P16035 220 aa10.47□□□□□ -0.73
FARP1-208ENST00000593548 VAC14Q08AM6 782 aa10.46□□□□□ -0.73
FARP1-208ENST00000593548 INTS6LQ5JSJ4 861 aaKnown RBP10.46□□□□□ -0.73
FARP1-208ENST00000593548 PPP1R26Q5T8A7 1209 aaPredicted RBP10.46□□□□□ -0.73
FARP1-208ENST00000593548 ZNF787Q6DD87 383 aa10.46□□□□□ -0.73
FARP1-208ENST00000593548 POM121Q96HA1 1249 aa10.46□□□□□ -0.73
FARP1-208ENST00000593548 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
FARP1-208ENST00000593548 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
FARP1-208ENST00000593548 DHX9Q08211 1270 aaKnown RBP10.45□□□□□ -0.74
FARP1-208ENST00000593548 IRF5Q13568 498 aa10.45□□□□□ -0.74
FARP1-208ENST00000593548 ATP13A2Q9NQ11 1180 aa10.45□□□□□ -0.74
FARP1-208ENST00000593548 PGPEP1Q9NXJ5 209 aa10.45□□□□□ -0.74
FARP1-208ENST00000593548 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
FARP1-208ENST00000593548 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
FARP1-208ENST00000593548 GMPR2Q9P2T1 348 aaKnown RBP10.44□□□□□ -0.74
FARP1-208ENST00000593548 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
FARP1-208ENST00000593548 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
FARP1-208ENST00000593548 POTECB2RU33 542 aa10.42□□□□□ -0.74
FARP1-208ENST00000593548 KLF16Q9BXK1 252 aaPredicted RBP10.42□□□□□ -0.74
FARP1-208ENST00000593548 TMPRSS4Q9NRS4 437 aa10.42□□□□□ -0.74
FARP1-208ENST00000593548 MCCD1P59942 119 aaPredicted RBP10.41□□□□□ -0.74
FARP1-208ENST00000593548 WASHC4Q2M389 1173 aa10.41□□□□□ -0.74
FARP1-208ENST00000593548 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
FARP1-208ENST00000593548 ERVH48-1M5A8F1 160 aa10.4□□□□□ -0.74
FARP1-208ENST00000593548 UPP2O95045 317 aa10.4□□□□□ -0.74
FARP1-208ENST00000593548 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.74
FARP1-208ENST00000593548 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
FARP1-208ENST00000593548 CBLBQ13191 982 aa10.39□□□□□ -0.75
FARP1-208ENST00000593548 SCARF1Q14162 830 aa10.39□□□□□ -0.75
FARP1-208ENST00000593548 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
FARP1-208ENST00000593548 PURBQ96QR8 312 aaKnown RBP10.39□□□□□ -0.75
FARP1-208ENST00000593548 ESPNB1AK53 854 aa10.38□□□□□ -0.75
FARP1-208ENST00000593548 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
FARP1-208ENST00000593548 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
FARP1-208ENST00000593548 ZNF784Q8NCA9 323 aaPredicted RBP10.38□□□□□ -0.75
FARP1-208ENST00000593548 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
FARP1-208ENST00000593548 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
FARP1-208ENST00000593548 BMP2P12643 396 aa10.37□□□□□ -0.75
FARP1-208ENST00000593548 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
FARP1-208ENST00000593548 CYLDQ9NQC7 956 aa10.37□□□□□ -0.75
FARP1-208ENST00000593548 MEIOBQ8N635 442 aa10.36□□□□□ -0.75
FARP1-208ENST00000593548 ZFP42Q96MM3 310 aa10.36□□□□□ -0.75
FARP1-208ENST00000593548 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
FARP1-208ENST00000593548 PCDHB11Q9Y5F2 797 aa10.36□□□□□ -0.75
FARP1-208ENST00000593548 SLFNL1Q499Z3 407 aa10.35□□□□□ -0.75
FARP1-208ENST00000593548 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
FARP1-208ENST00000593548 ESF1Q9H501 851 aaKnown RBP10.35□□□□□ -0.75
FARP1-208ENST00000593548 RELBQ01201 579 aa10.34□□□□□ -0.75
FARP1-208ENST00000593548 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
FARP1-208ENST00000593548 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
FARP1-208ENST00000593548 AGBL1Q96MI9 1066 aa10.34□□□□□ -0.75
FARP1-208ENST00000593548 SNRPBP14678 240 aaKnown RBP10.33□□□□□ -0.76
FARP1-208ENST00000593548 TRIM47Q96LD4 638 aa10.33□□□□□ -0.76
FARP1-208ENST00000593548 TSEN34Q9BSV6 310 aaKnown RBP10.33□□□□□ -0.76
FARP1-208ENST00000593548 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
FARP1-208ENST00000593548 SOX11P35716 441 aa10.31□□□□□ -0.76
FARP1-208ENST00000593548 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
FARP1-208ENST00000593548 POM121CA8CG34 1229 aa10.3□□□□□ -0.76
FARP1-208ENST00000593548 Q6ZVU0 165 aa10.3□□□□□ -0.76
FARP1-208ENST00000593548 LILRA1O75019 489 aa10.29□□□□□ -0.76
FARP1-208ENST00000593548 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
FARP1-208ENST00000593548 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
FARP1-208ENST00000593548 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
FARP1-208ENST00000593548 ZNF395Q9H8N7 513 aaPredicted RBP10.29□□□□□ -0.76
FARP1-208ENST00000593548 GTF3C3Q9Y5Q9 886 aa10.29□□□□□ -0.76
FARP1-208ENST00000593548 ADH1AP07327 375 aa10.28□□□□□ -0.76
FARP1-208ENST00000593548 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
FARP1-208ENST00000593548 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
FARP1-208ENST00000593548 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
FARP1-208ENST00000593548 MAN1A2O60476 641 aa10.27□□□□□ -0.77
FARP1-208ENST00000593548 MYCP01106 439 aaPredicted RBP10.27□□□□□ -0.77
FARP1-208ENST00000593548 SCTRP47872 440 aa10.27□□□□□ -0.77
FARP1-208ENST00000593548 OXLD1Q5BKU9 147 aa10.27□□□□□ -0.77
FARP1-208ENST00000593548 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
FARP1-208ENST00000593548 CDCA7Q9BWT1 371 aaPredicted RBP10.26□□□□□ -0.77
FARP1-208ENST00000593548 POLMQ9NP87 494 aaPredicted RBP10.26□□□□□ -0.77
FARP1-208ENST00000593548 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
FARP1-208ENST00000593548 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
FARP1-208ENST00000593548 INSM2Q96T92 566 aaPredicted RBP10.25□□□□□ -0.77
FARP1-208ENST00000593548 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
FARP1-208ENST00000593548 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
FARP1-208ENST00000593548 TTLL8A6PVC2 850 aa10.23□□□□□ -0.77
FARP1-208ENST00000593548 MEN1O00255 615 aa10.23□□□□□ -0.77
FARP1-208ENST00000593548 PIK3CDO00329 1044 aa10.23□□□□□ -0.77
FARP1-208ENST00000593548 SPINT1O43278 529 aa10.23□□□□□ -0.77
FARP1-208ENST00000593548 SKIP12755 728 aa10.23□□□□□ -0.77
FARP1-208ENST00000593548 PTGIRP43119 386 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms