RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
LDLRAD4-219ENST00000593236 LARP1Q6PKG0 1096 aaKnown RBP17.65■□□□□ 0.42
LDLRAD4-219ENST00000593236 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
LDLRAD4-219ENST00000593236 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
LDLRAD4-219ENST00000593236 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.42
LDLRAD4-219ENST00000593236 APBA3O96018 575 aa17.64■□□□□ 0.41
LDLRAD4-219ENST00000593236 USP19O94966 1318 aa17.64■□□□□ 0.41
LDLRAD4-219ENST00000593236 CPDO75976 1380 aa17.64■□□□□ 0.41
LDLRAD4-219ENST00000593236 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
LDLRAD4-219ENST00000593236 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
LDLRAD4-219ENST00000593236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.412e-7■■■□□ 16.4
LDLRAD4-219ENST00000593236 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
LDLRAD4-219ENST00000593236 LMO7Q8WWI1 1683 aa17.63■□□□□ 0.41
LDLRAD4-219ENST00000593236 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
LDLRAD4-219ENST00000593236 GCP02774 474 aa17.62■□□□□ 0.41
LDLRAD4-219ENST00000593236 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
LDLRAD4-219ENST00000593236 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
LDLRAD4-219ENST00000593236 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
LDLRAD4-219ENST00000593236 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
LDLRAD4-219ENST00000593236 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
LDLRAD4-219ENST00000593236 NME9Q86XW9 330 aa17.59■□□□□ 0.41
LDLRAD4-219ENST00000593236 THRAP3Q9Y2W1 955 aaKnown RBP17.59■□□□□ 0.41
LDLRAD4-219ENST00000593236 PIK3C2AO00443 1686 aa17.58■□□□□ 0.41
LDLRAD4-219ENST00000593236 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
LDLRAD4-219ENST00000593236 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
LDLRAD4-219ENST00000593236 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD4-219ENST00000593236 RREB1Q92766 1687 aa17.56■□□□□ 0.4
LDLRAD4-219ENST00000593236 NLRP6P59044 892 aa17.55■□□□□ 0.4
LDLRAD4-219ENST00000593236 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
LDLRAD4-219ENST00000593236 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
LDLRAD4-219ENST00000593236 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
LDLRAD4-219ENST00000593236 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 NUP188Q5SRE5 1749 aa17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 CRB1P82279 1406 aa17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
LDLRAD4-219ENST00000593236 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
LDLRAD4-219ENST00000593236 SLIT3O75094 1523 aa17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 FYB1O15117 783 aa17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
LDLRAD4-219ENST00000593236 SOX12O15370 315 aa17.51■□□□□ 0.39
LDLRAD4-219ENST00000593236 AXIN2Q9Y2T1 843 aa17.51■□□□□ 0.39
LDLRAD4-219ENST00000593236 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
LDLRAD4-219ENST00000593236 COL18A1P39060 1754 aa17.51■□□□□ 0.39
LDLRAD4-219ENST00000593236 AMER1Q5JTC6 1135 aaPredicted RBP17.5■□□□□ 0.39
LDLRAD4-219ENST00000593236 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
LDLRAD4-219ENST00000593236 COG3Q96JB2 828 aa17.5■□□□□ 0.39
LDLRAD4-219ENST00000593236 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
LDLRAD4-219ENST00000593236 TOM1L2Q6ZVM7 507 aa17.49■□□□□ 0.39
LDLRAD4-219ENST00000593236 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
LDLRAD4-219ENST00000593236 DDB1Q16531 1140 aa17.48■□□□□ 0.39
LDLRAD4-219ENST00000593236 NSD2O96028 1365 aa17.48■□□□□ 0.39
LDLRAD4-219ENST00000593236 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
LDLRAD4-219ENST00000593236 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
LDLRAD4-219ENST00000593236 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
LDLRAD4-219ENST00000593236 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
LDLRAD4-219ENST00000593236 PLSCR1O15162 318 aa17.46■□□□□ 0.39
LDLRAD4-219ENST00000593236 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
LDLRAD4-219ENST00000593236 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
LDLRAD4-219ENST00000593236 ANKRD26Q9UPS8 1709 aa17.45■□□□□ 0.38
LDLRAD4-219ENST00000593236 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
LDLRAD4-219ENST00000593236 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
LDLRAD4-219ENST00000593236 RGPD5Q99666 1765 aa17.45■□□□□ 0.38
LDLRAD4-219ENST00000593236 NFAT5O94916 1531 aa17.44■□□□□ 0.38
LDLRAD4-219ENST00000593236 FBLN1P23142 703 aa17.44■□□□□ 0.38
LDLRAD4-219ENST00000593236 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
LDLRAD4-219ENST00000593236 KCNH5Q8NCM2 988 aa17.44■□□□□ 0.38
LDLRAD4-219ENST00000593236 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
LDLRAD4-219ENST00000593236 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
LDLRAD4-219ENST00000593236 WNK3Q9BYP7 1800 aa17.43■□□□□ 0.38
LDLRAD4-219ENST00000593236 KCNQ2O43526 872 aa17.43■□□□□ 0.38
LDLRAD4-219ENST00000593236 SPON1Q9HCB6 807 aa17.43■□□□□ 0.38
LDLRAD4-219ENST00000593236 PROM2Q8N271 834 aa17.42■□□□□ 0.38
LDLRAD4-219ENST00000593236 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
LDLRAD4-219ENST00000593236 CARD10Q9BWT7 1032 aa17.42■□□□□ 0.38
LDLRAD4-219ENST00000593236 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
LDLRAD4-219ENST00000593236 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
LDLRAD4-219ENST00000593236 ANO8Q9HCE9 1232 aaPredicted RBP17.41■□□□□ 0.38
LDLRAD4-219ENST00000593236 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
LDLRAD4-219ENST00000593236 RRS1Q15050 365 aaKnown RBP17.4■□□□□ 0.38
LDLRAD4-219ENST00000593236 BCL9O00512 1426 aa17.39■□□□□ 0.38
LDLRAD4-219ENST00000593236 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.37
LDLRAD4-219ENST00000593236 EXOC5O00471 708 aa17.38■□□□□ 0.37
LDLRAD4-219ENST00000593236 MIER1Q8N108 512 aa17.38■□□□□ 0.37
LDLRAD4-219ENST00000593236 PDGFDQ9GZP0 370 aaPredicted RBP17.38■□□□□ 0.37
LDLRAD4-219ENST00000593236 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
LDLRAD4-219ENST00000593236 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
LDLRAD4-219ENST00000593236 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
LDLRAD4-219ENST00000593236 LTN1O94822 1766 aa17.35■□□□□ 0.37
LDLRAD4-219ENST00000593236 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
LDLRAD4-219ENST00000593236 YY1P25490 414 aa17.35■□□□□ 0.37
LDLRAD4-219ENST00000593236 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
LDLRAD4-219ENST00000593236 AMPHP49418 695 aa17.34■□□□□ 0.37
LDLRAD4-219ENST00000593236 POLKQ9UBT6 870 aa17.33■□□□□ 0.36
LDLRAD4-219ENST00000593236 ABCC6O95255 1503 aa17.32■□□□□ 0.36
LDLRAD4-219ENST00000593236 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms