RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NINLQ9Y2I6 1382 aa19.5■□□□□ 0.71
APOC1-208ENST00000592535 AXIN2Q9Y2T1 843 aa19.5■□□□□ 0.71
APOC1-208ENST00000592535 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
APOC1-208ENST00000592535 LTN1O94822 1766 aa19.49■□□□□ 0.71
APOC1-208ENST00000592535 PARP4Q9UKK3 1724 aaKnown RBP19.49■□□□□ 0.71
APOC1-208ENST00000592535 TMF1P82094 1093 aa19.49■□□□□ 0.71
APOC1-208ENST00000592535 SF3B2Q13435 895 aaKnown RBP19.49■□□□□ 0.71
APOC1-208ENST00000592535 DEFB132Q7Z7B7 95 aa19.49■□□□□ 0.71
APOC1-208ENST00000592535 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
APOC1-208ENST00000592535 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
APOC1-208ENST00000592535 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
APOC1-208ENST00000592535 TNS1Q9HBL0 1735 aaKnown RBP19.47■□□□□ 0.71
APOC1-208ENST00000592535 ABCC6O95255 1503 aa19.46■□□□□ 0.71
APOC1-208ENST00000592535 OVOS2A0A0J9YW53 1432 aa19.46■□□□□ 0.71
APOC1-208ENST00000592535 OVOS2Q6IE36 1432 aa19.46■□□□□ 0.71
APOC1-208ENST00000592535 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
APOC1-208ENST00000592535 WDR17Q8IZU2 1322 aa19.46■□□□□ 0.71
APOC1-208ENST00000592535 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
APOC1-208ENST00000592535 LRRC37A3O60309 1634 aa19.43■□□□□ 0.7
APOC1-208ENST00000592535 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
APOC1-208ENST00000592535 MYOM1P52179 1685 aa19.43■□□□□ 0.7
APOC1-208ENST00000592535 CSB-PGBD3P0DP91 1061 aa19.42■□□□□ 0.7
APOC1-208ENST00000592535 FAM196AQ6ZSG2 479 aa19.42■□□□□ 0.7
APOC1-208ENST00000592535 BAG6P46379 1132 aa19.41■□□□□ 0.7
APOC1-208ENST00000592535 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
APOC1-208ENST00000592535 TRIM37O94972 964 aa19.39■□□□□ 0.69
APOC1-208ENST00000592535 CARD10Q9BWT7 1032 aa19.39■□□□□ 0.69
APOC1-208ENST00000592535 PEAK1Q9H792 1746 aa19.39■□□□□ 0.69
APOC1-208ENST00000592535 KIF20BQ96Q89 1820 aa19.39■□□□□ 0.69
APOC1-208ENST00000592535 EN1Q05925 392 aaPredicted RBP19.38■□□□□ 0.69
APOC1-208ENST00000592535 DISP2A7MBM2 1401 aa19.37■□□□□ 0.69
APOC1-208ENST00000592535 COG3Q96JB2 828 aa19.37■□□□□ 0.69
APOC1-208ENST00000592535 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
APOC1-208ENST00000592535 ERBB3P21860 1342 aa19.36■□□□□ 0.69
APOC1-208ENST00000592535 DDB1Q16531 1140 aa19.36■□□□□ 0.69
APOC1-208ENST00000592535 CCDC7Q96M83 1385 aa19.35■□□□□ 0.69
APOC1-208ENST00000592535 CDCA7Q9BWT1 371 aaPredicted RBP19.34■□□□□ 0.69
APOC1-208ENST00000592535 OVOS2A0A0G2JMS6 1433 aa19.34■□□□□ 0.69
APOC1-208ENST00000592535 FYB1O15117 783 aa19.33■□□□□ 0.68
APOC1-208ENST00000592535 FBLN1P23142 703 aa19.33■□□□□ 0.68
APOC1-208ENST00000592535 ANKRD24Q8TF21 1146 aa19.33■□□□□ 0.68
APOC1-208ENST00000592535 GGNBP2Q9H3C7 697 aa19.33■□□□□ 0.68
APOC1-208ENST00000592535 MAP3K19Q56UN5 1328 aa19.32■□□□□ 0.68
APOC1-208ENST00000592535 EZH2Q15910 746 aaKnown RBP19.32■□□□□ 0.68
APOC1-208ENST00000592535 IP6K1Q92551 441 aa19.32■□□□□ 0.68
APOC1-208ENST00000592535 NLRP2Q9NX02 1062 aa19.32■□□□□ 0.68
APOC1-208ENST00000592535 FAM208AQ9UK61 1670 aaKnown RBP19.32■□□□□ 0.68
APOC1-208ENST00000592535 APBA3O96018 575 aa19.31■□□□□ 0.68
APOC1-208ENST00000592535 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
APOC1-208ENST00000592535 EIF4G2P78344 907 aaKnown RBP eCLIP19.31■□□□□ 0.68
APOC1-208ENST00000592535 CARD14Q9BXL6 1004 aa19.31■□□□□ 0.68
APOC1-208ENST00000592535 RREB1Q92766 1687 aa19.3■□□□□ 0.68
APOC1-208ENST00000592535 RGPD2P0DJD1 1756 aa19.3■□□□□ 0.68
APOC1-208ENST00000592535 MARCH10Q8NA82 808 aaPredicted RBP19.3■□□□□ 0.68
APOC1-208ENST00000592535 CAMKK2Q96RR4 588 aa19.3■□□□□ 0.68
APOC1-208ENST00000592535 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
APOC1-208ENST00000592535 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
APOC1-208ENST00000592535 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
APOC1-208ENST00000592535 HOXC9P31274 260 aa19.28■□□□□ 0.68
APOC1-208ENST00000592535 AMPHP49418 695 aa19.28■□□□□ 0.68
APOC1-208ENST00000592535 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
APOC1-208ENST00000592535 POLR3GLQ9BT43 218 aa19.28■□□□□ 0.68
APOC1-208ENST00000592535 EXOC5O00471 708 aa19.27■□□□□ 0.68
APOC1-208ENST00000592535 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
APOC1-208ENST00000592535 NUP188Q5SRE5 1749 aa19.27■□□□□ 0.68
APOC1-208ENST00000592535 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
APOC1-208ENST00000592535 IL2RBP14784 551 aa19.26■□□□□ 0.67
APOC1-208ENST00000592535 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
APOC1-208ENST00000592535 BCL9O00512 1426 aa19.25■□□□□ 0.67
APOC1-208ENST00000592535 RTL1A6NKG5 1358 aa19.25■□□□□ 0.67
APOC1-208ENST00000592535 RGPD3A6NKT7 1758 aaPredicted RBP19.24■□□□□ 0.67
APOC1-208ENST00000592535 RGPD4Q7Z3J3 1758 aa19.24■□□□□ 0.67
APOC1-208ENST00000592535 PTF1AQ7RTS3 328 aa19.24■□□□□ 0.67
APOC1-208ENST00000592535 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
APOC1-208ENST00000592535 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
APOC1-208ENST00000592535 R3HDM1Q15032 1099 aaKnown RBP19.21■□□□□ 0.67
APOC1-208ENST00000592535 MAP2P11137 1827 aaKnown RBP19.21■□□□□ 0.67
APOC1-208ENST00000592535 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
APOC1-208ENST00000592535 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
APOC1-208ENST00000592535 KAT6BQ8WYB5 2073 aa19.19■□□□□ 0.66
APOC1-208ENST00000592535 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
APOC1-208ENST00000592535 LRP5O75197 1615 aa19.18■□□□□ 0.66
APOC1-208ENST00000592535 HSP90AB2PQ58FF8 381 aa19.18■□□□□ 0.66
APOC1-208ENST00000592535 INSRP06213 1382 aa19.18■□□□□ 0.66
APOC1-208ENST00000592535 FLT4P35916 1363 aa19.18■□□□□ 0.66
APOC1-208ENST00000592535 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
APOC1-208ENST00000592535 MEGF6O75095 1541 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 PLSCR1O15162 318 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 NBPF6Q5VWK0 638 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 NBPF4Q96M43 638 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 EMILIN1Q9Y6C2 1016 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
APOC1-208ENST00000592535 KCNQ2O43526 872 aa19.16■□□□□ 0.66
APOC1-208ENST00000592535 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
APOC1-208ENST00000592535 PANK3Q9H999 370 aa19.16■□□□□ 0.66
APOC1-208ENST00000592535 USHBP1Q8N6Y0 703 aa19.15■□□□□ 0.66
APOC1-208ENST00000592535 BTAF1O14981 1849 aa19.15■□□□□ 0.66
APOC1-208ENST00000592535 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
APOC1-208ENST00000592535 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
APOC1-208ENST00000592535 DOT1LQ8TEK3 1739 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms