RNA–Protein interactions for RNA: ENST00000592484.5

LRP3-204, Transcript of LDL receptor related protein 3, humanhuman

TSL 4

Gene LRP3, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-204ENST00000592484 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
LRP3-204ENST00000592484 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
LRP3-204ENST00000592484 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
LRP3-204ENST00000592484 USP54Q70EL1 1684 aa22.53■■□□□ 1.2
LRP3-204ENST00000592484 RREB1Q92766 1687 aa22.53■■□□□ 1.2
LRP3-204ENST00000592484 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
LRP3-204ENST00000592484 PEAK1Q9H792 1746 aa22.52■■□□□ 1.2
LRP3-204ENST00000592484 OVOS2A0A0G2JMS6 1433 aa22.52■■□□□ 1.2
LRP3-204ENST00000592484 OVOS2A0A0J9YW53 1432 aa22.52■■□□□ 1.2
LRP3-204ENST00000592484 OVOS2Q6IE36 1432 aa22.52■■□□□ 1.2
LRP3-204ENST00000592484 RGPD5Q99666 1765 aa22.51■■□□□ 1.19
LRP3-204ENST00000592484 CDCA7Q9BWT1 371 aaPredicted RBP22.51■■□□□ 1.19
LRP3-204ENST00000592484 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
LRP3-204ENST00000592484 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
LRP3-204ENST00000592484 R3HDM1Q15032 1099 aaKnown RBP22.5■■□□□ 1.19
LRP3-204ENST00000592484 DDB1Q16531 1140 aa22.5■■□□□ 1.19
LRP3-204ENST00000592484 PUS7Q96PZ0 661 aaKnown RBP22.5■■□□□ 1.19
LRP3-204ENST00000592484 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
LRP3-204ENST00000592484 SOX12O15370 315 aa22.48■■□□□ 1.19
LRP3-204ENST00000592484 HDGFL2Q7Z4V5 671 aaPredicted RBP22.48■■□□□ 1.19
LRP3-204ENST00000592484 CARD10Q9BWT7 1032 aa22.48■■□□□ 1.19
LRP3-204ENST00000592484 SBF2Q86WG5 1849 aa22.47■■□□□ 1.19
LRP3-204ENST00000592484 EDC4Q6P2E9 1401 aaKnown RBP22.47■■□□□ 1.19
LRP3-204ENST00000592484 RGPD3A6NKT7 1758 aaPredicted RBP22.46■■□□□ 1.19
LRP3-204ENST00000592484 RGPD4Q7Z3J3 1758 aa22.46■■□□□ 1.19
LRP3-204ENST00000592484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.19
LRP3-204ENST00000592484 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
LRP3-204ENST00000592484 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.18
LRP3-204ENST00000592484 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
LRP3-204ENST00000592484 CCDC7Q96M83 1385 aa22.45■■□□□ 1.18
LRP3-204ENST00000592484 BCL9O00512 1426 aa22.45■■□□□ 1.18
LRP3-204ENST00000592484 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
LRP3-204ENST00000592484 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
LRP3-204ENST00000592484 NINLQ9Y2I6 1382 aa22.43■■□□□ 1.18
LRP3-204ENST00000592484 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
LRP3-204ENST00000592484 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
LRP3-204ENST00000592484 NME9Q86XW9 330 aa22.43■■□□□ 1.18
LRP3-204ENST00000592484 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
LRP3-204ENST00000592484 LTN1O94822 1766 aa22.42■■□□□ 1.18
LRP3-204ENST00000592484 PLSCR1O15162 318 aa22.41■■□□□ 1.18
LRP3-204ENST00000592484 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
LRP3-204ENST00000592484 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
LRP3-204ENST00000592484 ERBB3P21860 1342 aa22.39■■□□□ 1.18
LRP3-204ENST00000592484 TESK2Q96S53 571 aa22.39■■□□□ 1.17
LRP3-204ENST00000592484 ST20-MTHFSA0A0A6YYL1 179 aa22.38■■□□□ 1.17
LRP3-204ENST00000592484 EXOC5O00471 708 aa22.38■■□□□ 1.17
LRP3-204ENST00000592484 TNS2Q63HR2 1409 aa22.38■■□□□ 1.17
LRP3-204ENST00000592484 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
LRP3-204ENST00000592484 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
LRP3-204ENST00000592484 FAM208AQ9UK61 1670 aaKnown RBP22.31■■□□□ 1.16
LRP3-204ENST00000592484 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
LRP3-204ENST00000592484 ANKRD36BQ8N2N9 1353 aa22.3■■□□□ 1.16
LRP3-204ENST00000592484 IL2RBP14784 551 aa22.3■■□□□ 1.16
LRP3-204ENST00000592484 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
LRP3-204ENST00000592484 IP6K1Q92551 441 aa22.29■■□□□ 1.16
LRP3-204ENST00000592484 USP47Q96K76 1375 aa22.28■■□□□ 1.16
LRP3-204ENST00000592484 TMF1P82094 1093 aa22.28■■□□□ 1.16
LRP3-204ENST00000592484 COG3Q96JB2 828 aa22.28■■□□□ 1.16
LRP3-204ENST00000592484 SPON1Q9HCB6 807 aa22.27■■□□□ 1.16
LRP3-204ENST00000592484 PROM2Q8N271 834 aa22.26■■□□□ 1.15
LRP3-204ENST00000592484 KCNQ2O43526 872 aa22.25■■□□□ 1.15
LRP3-204ENST00000592484 ANO8Q9HCE9 1232 aaPredicted RBP22.25■■□□□ 1.15
LRP3-204ENST00000592484 CASZ1Q86V15 1759 aa22.25■■□□□ 1.15
LRP3-204ENST00000592484 TXNRD1Q16881 649 aa22.24■■□□□ 1.15
LRP3-204ENST00000592484 MAP3K19Q56UN5 1328 aa22.23■■□□□ 1.15
LRP3-204ENST00000592484 CDCA8Q53HL2 280 aa22.22■■□□□ 1.15
LRP3-204ENST00000592484 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
LRP3-204ENST00000592484 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
LRP3-204ENST00000592484 HOXC9P31274 260 aa22.2■■□□□ 1.14
LRP3-204ENST00000592484 AMPHP49418 695 aa22.2■■□□□ 1.14
LRP3-204ENST00000592484 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
LRP3-204ENST00000592484 ACSBG1Q96GR2 724 aa22.19■■□□□ 1.14
LRP3-204ENST00000592484 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
LRP3-204ENST00000592484 PPP1R1BQ9UD71 204 aaPredicted RBP22.19■■□□□ 1.14
LRP3-204ENST00000592484 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
LRP3-204ENST00000592484 BTAF1O14981 1849 aa22.19■■□□□ 1.14
LRP3-204ENST00000592484 FYB1O15117 783 aa22.18■■□□□ 1.14
LRP3-204ENST00000592484 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
LRP3-204ENST00000592484 KIF20BQ96Q89 1820 aa22.16■■□□□ 1.14
LRP3-204ENST00000592484 FBLN1P23142 703 aa22.15■■□□□ 1.14
LRP3-204ENST00000592484 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
LRP3-204ENST00000592484 PAPPAQ13219 1627 aa22.14■■□□□ 1.14
LRP3-204ENST00000592484 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
LRP3-204ENST00000592484 DDX54Q8TDD1 881 aaKnown RBP22.13■■□□□ 1.13
LRP3-204ENST00000592484 MYOM1P52179 1685 aa22.13■■□□□ 1.13
LRP3-204ENST00000592484 SMG6Q86US8 1419 aaKnown RBP22.13■■□□□ 1.13
LRP3-204ENST00000592484 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
LRP3-204ENST00000592484 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
LRP3-204ENST00000592484 RRS1Q15050 365 aaKnown RBP22.12■■□□□ 1.13
LRP3-204ENST00000592484 PDGFDQ9GZP0 370 aaPredicted RBP22.12■■□□□ 1.13
LRP3-204ENST00000592484 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
LRP3-204ENST00000592484 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
LRP3-204ENST00000592484 ZBTB7AO95365 584 aa22.1■■□□□ 1.13
LRP3-204ENST00000592484 MEGF6O75095 1541 aa22.1■■□□□ 1.13
LRP3-204ENST00000592484 ZCRB1Q8TBF4 217 aaKnown RBP22.09■■□□□ 1.13
LRP3-204ENST00000592484 INSRP06213 1382 aa22.09■■□□□ 1.13
LRP3-204ENST00000592484 DOT1LQ8TEK3 1739 aa22.09■■□□□ 1.13
LRP3-204ENST00000592484 PTGER2P43116 358 aa22.08■■□□□ 1.13
LRP3-204ENST00000592484 MTFR1LQ9H019 292 aa22.08■■□□□ 1.13
LRP3-204ENST00000592484 FLT4P35916 1363 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms