RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 CRB1P82279 1406 aa33.28■■■□□ 2.92
CAPNS1-214ENST00000592483 USP19O94966 1318 aa33.28■■■□□ 2.92
CAPNS1-214ENST00000592483 ACEP12821 1306 aa33.28■■■□□ 2.92
CAPNS1-214ENST00000592483 COL5A2P05997 1499 aaPredicted RBP33.27■■■□□ 2.92
CAPNS1-214ENST00000592483 NBPF1Q3BBV0 1214 aa33.27■■■□□ 2.92
CAPNS1-214ENST00000592483 PTF1AQ7RTS3 328 aa33.26■■■□□ 2.91
CAPNS1-214ENST00000592483 GCP02774 474 aa33.25■■■□□ 2.91
CAPNS1-214ENST00000592483 DDB1Q16531 1140 aa33.25■■■□□ 2.91
CAPNS1-214ENST00000592483 CARD11Q9BXL7 1154 aa33.24■■■□□ 2.91
CAPNS1-214ENST00000592483 STK32BQ9NY57 414 aa33.24■■■□□ 2.91
CAPNS1-214ENST00000592483 PLEKHG3A1L390 1219 aa33.22■■■□□ 2.91
CAPNS1-214ENST00000592483 NLRP13Q86W25 1043 aa33.22■■■□□ 2.91
CAPNS1-214ENST00000592483 CDK19Q9BWU1 502 aa33.22■■■□□ 2.91
CAPNS1-214ENST00000592483 MTFR1LQ9H019 292 aa33.22■■■□□ 2.91
CAPNS1-214ENST00000592483 CCDC61Q9Y6R9 512 aa33.22■■■□□ 2.91
CAPNS1-214ENST00000592483 SLC15A2Q16348 729 aa33.2■■■□□ 2.91
CAPNS1-214ENST00000592483 SGIP1Q9BQI5 828 aa33.2■■■□□ 2.91
CAPNS1-214ENST00000592483 LRRC37A3O60309 1634 aa33.2■■■□□ 2.9
CAPNS1-214ENST00000592483 BCL9O00512 1426 aa33.19■■■□□ 2.9
CAPNS1-214ENST00000592483 TXNRD1Q16881 649 aa33.17■■■□□ 2.9
CAPNS1-214ENST00000592483 TOPAZ1Q8N9V7 1692 aa33.15■■■□□ 2.9
CAPNS1-214ENST00000592483 MARCH10Q8NA82 808 aaPredicted RBP33.15■■■□□ 2.9
CAPNS1-214ENST00000592483 ARHGEF28Q8N1W1 1705 aaKnown RBP33.13■■■□□ 2.89
CAPNS1-214ENST00000592483 AATKQ6ZMQ8 1374 aa33.12■■■□□ 2.89
CAPNS1-214ENST00000592483 GIGYF1O75420 1035 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-214ENST00000592483 TOM1L2Q6ZVM7 507 aa33.12■■■□□ 2.89
CAPNS1-214ENST00000592483 ARXQ96QS3 562 aa33.12■■■□□ 2.89
CAPNS1-214ENST00000592483 CDCA7Q9BWT1 371 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-214ENST00000592483 USP47Q96K76 1375 aa33.11■■■□□ 2.89
CAPNS1-214ENST00000592483 MAP3K5Q99683 1374 aa33.11■■■□□ 2.89
CAPNS1-214ENST00000592483 CEP350Q5VT06 3117 aa33.09■■■□□ 2.89
CAPNS1-214ENST00000592483 EIF4G2P78344 907 aaKnown RBP eCLIP33.08■■■□□ 2.89
CAPNS1-214ENST00000592483 ZBTB7CA1YPR0 619 aa33.07■■■□□ 2.88
CAPNS1-214ENST00000592483 GPR162Q16538 588 aa33.05■■■□□ 2.88
CAPNS1-214ENST00000592483 BRD4O60885 1362 aaPredicted RBP33.04■■■□□ 2.88
CAPNS1-214ENST00000592483 AKAP12Q02952 1782 aa33.04■■■□□ 2.88
CAPNS1-214ENST00000592483 WDR17Q8IZU2 1322 aa33.03■■■□□ 2.88
CAPNS1-214ENST00000592483 CENPJQ9HC77 1338 aaPredicted RBP33.02■■■□□ 2.88
CAPNS1-214ENST00000592483 SLC24A1O60721 1099 aa33.01■■■□□ 2.87
CAPNS1-214ENST00000592483 WNK3Q9BYP7 1800 aa33■■■□□ 2.87
CAPNS1-214ENST00000592483 NLRP6P59044 892 aa33■■■□□ 2.87
CAPNS1-214ENST00000592483 SBNO2Q9Y2G9 1366 aa32.99■■■□□ 2.87
CAPNS1-214ENST00000592483 AXIN2Q9Y2T1 843 aa32.98■■■□□ 2.87
CAPNS1-214ENST00000592483 EXOC5O00471 708 aa32.97■■■□□ 2.87
CAPNS1-214ENST00000592483 SLIT3O75094 1523 aa32.97■■■□□ 2.87
CAPNS1-214ENST00000592483 COL18A1P39060 1754 aa32.96■■■□□ 2.87
CAPNS1-214ENST00000592483 PPIP5K1Q6PFW1 1433 aa32.96■■■□□ 2.87
CAPNS1-214ENST00000592483 HSPA5P11021 654 aaKnown RBP32.95■■■□□ 2.87
CAPNS1-214ENST00000592483 CARD10Q9BWT7 1032 aa32.95■■■□□ 2.87
CAPNS1-214ENST00000592483 QRICH2Q9H0J4 1663 aa32.94■■■□□ 2.86
CAPNS1-214ENST00000592483 ST20-MTHFSA0A0A6YYL1 179 aa32.94■■■□□ 2.86
CAPNS1-214ENST00000592483 GOLGB1Q14789 3259 aaKnown RBP32.92■■■□□ 2.86
CAPNS1-214ENST00000592483 SRPK2P78362 688 aaKnown RBP32.92■■■□□ 2.86
CAPNS1-214ENST00000592483 USP6P35125 1406 aa32.88■■■□□ 2.85
CAPNS1-214ENST00000592483 PAPPAQ13219 1627 aa32.88■■■□□ 2.85
CAPNS1-214ENST00000592483 CSB-PGBD3P0DP91 1061 aa32.87■■■□□ 2.85
CAPNS1-214ENST00000592483 CPSF1Q10570 1443 aaKnown RBP32.86■■■□□ 2.85
CAPNS1-214ENST00000592483 ARHGEF25Q86VW2 580 aa32.86■■■□□ 2.85
CAPNS1-214ENST00000592483 TESK2Q96S53 571 aa32.86■■■□□ 2.85
CAPNS1-214ENST00000592483 SHANK3Q9BYB0 1731 aa32.85■■■□□ 2.85
CAPNS1-214ENST00000592483 PELP1Q8IZL8 1130 aaKnown RBP32.85■■■□□ 2.85
CAPNS1-214ENST00000592483 SLC16A10Q8TF71 515 aa32.85■■■□□ 2.85
CAPNS1-214ENST00000592483 CABP2Q9NPB3 220 aa32.85■■■□□ 2.85
CAPNS1-214ENST00000592483 NHSQ6T4R5 1651 aa32.85■■■□□ 2.85
CAPNS1-214ENST00000592483 ZNF827Q17R98 1081 aa32.84■■■□□ 2.85
CAPNS1-214ENST00000592483 POLD1P28340 1107 aa32.83■■■□□ 2.85
CAPNS1-214ENST00000592483 KLHL34Q8N239 644 aa32.83■■■□□ 2.85
CAPNS1-214ENST00000592483 CABP1Q9NZU7 370 aa32.83■■■□□ 2.85
CAPNS1-214ENST00000592483 CCDC7Q96M83 1385 aa32.83■■■□□ 2.85
CAPNS1-214ENST00000592483 ACSBG1Q96GR2 724 aa32.82■■■□□ 2.84
CAPNS1-214ENST00000592483 TNS2Q63HR2 1409 aa32.82■■■□□ 2.84
CAPNS1-214ENST00000592483 KCNH5Q8NCM2 988 aa32.81■■■□□ 2.84
CAPNS1-214ENST00000592483 TMF1P82094 1093 aa32.8■■■□□ 2.84
CAPNS1-214ENST00000592483 EVC2Q86UK5 1308 aa32.79■■■□□ 2.84
CAPNS1-214ENST00000592483 RGPD5Q99666 1765 aa32.79■■■□□ 2.84
CAPNS1-214ENST00000592483 LRRC4BQ9NT99 713 aa32.78■■■□□ 2.84
CAPNS1-214ENST00000592483 PIK3C2AO00443 1686 aa32.78■■■□□ 2.84
CAPNS1-214ENST00000592483 GRIN3BO60391 1043 aa32.77■■■□□ 2.84
CAPNS1-214ENST00000592483 CDCA8Q53HL2 280 aa32.77■■■□□ 2.84
CAPNS1-214ENST00000592483 AKT1S1Q96B36 256 aa32.76■■■□□ 2.83
CAPNS1-214ENST00000592483 PUS7Q96PZ0 661 aaKnown RBP32.76■■■□□ 2.83
CAPNS1-214ENST00000592483 NLGN2Q8NFZ4 835 aa32.74■■■□□ 2.83
CAPNS1-214ENST00000592483 COL24A1Q17RW2 1714 aa32.74■■■□□ 2.83
CAPNS1-214ENST00000592483 ABCC6O95255 1503 aa32.73■■■□□ 2.83
CAPNS1-214ENST00000592483 BTAF1O14981 1849 aa32.72■■■□□ 2.83
CAPNS1-214ENST00000592483 SOX12O15370 315 aa32.7■■■□□ 2.83
CAPNS1-214ENST00000592483 SLC27A3Q5K4L6 730 aa32.7■■■□□ 2.83
CAPNS1-214ENST00000592483 QSER1Q2KHR3 1735 aa32.7■■■□□ 2.83
CAPNS1-214ENST00000592483 YBX3P16989 372 aaKnown RBP eCLIP32.69■■■□□ 2.822e-23■■■■□ 22.9
CAPNS1-214ENST00000592483 PNPLA7Q6ZV29 1317 aa32.69■■■□□ 2.82
CAPNS1-214ENST00000592483 KAT6BQ8WYB5 2073 aa32.67■■■□□ 2.82
CAPNS1-214ENST00000592483 HSPA6P17066 643 aa32.67■■■□□ 2.82
CAPNS1-214ENST00000592483 TTC21BQ7Z4L5 1316 aa32.67■■■□□ 2.82
CAPNS1-214ENST00000592483 ZNF692Q9BU19 519 aaPredicted RBP32.66■■■□□ 2.82
CAPNS1-214ENST00000592483 ATP10DQ9P241 1426 aa32.66■■■□□ 2.82
CAPNS1-214ENST00000592483 TFCP2L1Q9NZI6 479 aa32.65■■■□□ 2.82
CAPNS1-214ENST00000592483 IL2RBP14784 551 aa32.64■■■□□ 2.82
CAPNS1-214ENST00000592483 GPBP1L1Q9HC44 474 aaPredicted RBP32.63■■■□□ 2.81
CAPNS1-214ENST00000592483 NFAT5O94916 1531 aa32.62■■■□□ 2.81
CAPNS1-214ENST00000592483 TTC21AQ8NDW8 1320 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms