RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TRIM27P14373 513 aa25.26■■□□□ 1.63
MBD3-209ENST00000592012 FTSJ3Q8IY81 847 aaKnown RBP25.26■■□□□ 1.63
MBD3-209ENST00000592012 USP31Q70CQ4 1352 aa25.26■■□□□ 1.63
MBD3-209ENST00000592012 CALD1Q05682 793 aaKnown RBP25.26■■□□□ 1.63
MBD3-209ENST00000592012 NPM2Q86SE8 214 aaKnown RBP25.26■■□□□ 1.63
MBD3-209ENST00000592012 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
MBD3-209ENST00000592012 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
MBD3-209ENST00000592012 THUMPD2Q9BTF0 503 aaKnown RBP25.25■■□□□ 1.63
MBD3-209ENST00000592012 NALCNQ8IZF0 1738 aa25.25■■□□□ 1.63
MBD3-209ENST00000592012 ATF7IPQ6VMQ6 1270 aa25.25■■□□□ 1.63
MBD3-209ENST00000592012 RGPD8O14715 1765 aaPredicted RBP25.24■■□□□ 1.63
MBD3-209ENST00000592012 PAK3O75914 559 aaPredicted RBP25.24■■□□□ 1.63
MBD3-209ENST00000592012 KCNA6P17658 529 aa25.24■■□□□ 1.63
MBD3-209ENST00000592012 NOB1Q9ULX3 412 aaKnown RBP25.24■■□□□ 1.63
MBD3-209ENST00000592012 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
MBD3-209ENST00000592012 TTC21AQ8NDW8 1320 aa25.24■■□□□ 1.63
MBD3-209ENST00000592012 FAM161AQ3B820 660 aa25.24■■□□□ 1.63
MBD3-209ENST00000592012 ALDH1L2Q3SY69 923 aa25.24■■□□□ 1.63
MBD3-209ENST00000592012 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
MBD3-209ENST00000592012 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
MBD3-209ENST00000592012 ZNF853P0CG23 659 aa25.23■■□□□ 1.63
MBD3-209ENST00000592012 C8orf34Q49A92 452 aa25.23■■□□□ 1.63
MBD3-209ENST00000592012 IFT57Q9NWB7 429 aa25.23■■□□□ 1.63
MBD3-209ENST00000592012 GNAI1P63096 354 aa25.22■■□□□ 1.63
MBD3-209ENST00000592012 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
MBD3-209ENST00000592012 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
MBD3-209ENST00000592012 LMOD3Q0VAK6 560 aa25.2■■□□□ 1.63
MBD3-209ENST00000592012 HSP90AB2PQ58FF8 381 aa25.2■■□□□ 1.63
MBD3-209ENST00000592012 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.63
MBD3-209ENST00000592012 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
MBD3-209ENST00000592012 AEBP1Q8IUX7 1158 aa25.19■■□□□ 1.62
MBD3-209ENST00000592012 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
MBD3-209ENST00000592012 RIMS1Q86UR5 1692 aaKnown RBP25.19■■□□□ 1.62
MBD3-209ENST00000592012 PEAK1Q9H792 1746 aa25.19■■□□□ 1.62
MBD3-209ENST00000592012 BRPF1P55201 1214 aaPredicted RBP25.19■■□□□ 1.62
MBD3-209ENST00000592012 IPO8O15397 1037 aaKnown RBP25.18■■□□□ 1.62
MBD3-209ENST00000592012 VAMP4O75379 141 aa25.18■■□□□ 1.62
MBD3-209ENST00000592012 MBIPQ9NS73 344 aa25.18■■□□□ 1.62
MBD3-209ENST00000592012 CFAP44Q96MT7 982 aa25.17■■□□□ 1.62
MBD3-209ENST00000592012 RWDD1Q9H446 243 aaPredicted RBP25.17■■□□□ 1.62
MBD3-209ENST00000592012 DDX19BQ9UMR2 479 aa25.17■■□□□ 1.62
MBD3-209ENST00000592012 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
MBD3-209ENST00000592012 FAM83GA6ND36 823 aa25.16■■□□□ 1.62
MBD3-209ENST00000592012 SOX12O15370 315 aa25.16■■□□□ 1.62
MBD3-209ENST00000592012 ANKLE2Q86XL3 938 aa25.15■■□□□ 1.62
MBD3-209ENST00000592012 TSPYL6Q8N831 410 aa25.15■■□□□ 1.62
MBD3-209ENST00000592012 MAP3K19Q56UN5 1328 aa25.15■■□□□ 1.62
MBD3-209ENST00000592012 ITPRIPQ8IWB1 547 aa25.15■■□□□ 1.62
MBD3-209ENST00000592012 TMEM57Q8N5G2 664 aa25.14■■□□□ 1.62
MBD3-209ENST00000592012 RGPD1P0DJD0 1748 aa25.13■■□□□ 1.61
MBD3-209ENST00000592012 DCTN1Q14203 1278 aa25.12■■□□□ 1.61
MBD3-209ENST00000592012 FMN2Q9NZ56 1722 aa25.11■■□□□ 1.61
MBD3-209ENST00000592012 MRPL50Q8N5N7 158 aaKnown RBP25.11■■□□□ 1.61
MBD3-209ENST00000592012 PIK3C2AO00443 1686 aa25.11■■□□□ 1.61
MBD3-209ENST00000592012 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
MBD3-209ENST00000592012 CHD2O14647 1828 aaKnown RBP25.1■■□□□ 1.61
MBD3-209ENST00000592012 SETD1BQ9UPS6 1966 aaKnown RBP25.1■■□□□ 1.61
MBD3-209ENST00000592012 ZBTB40Q9NUA8 1239 aa25.1■■□□□ 1.61
MBD3-209ENST00000592012 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
MBD3-209ENST00000592012 ELL2O00472 640 aaPredicted RBP25.09■■□□□ 1.61
MBD3-209ENST00000592012 FLT4P35916 1363 aa25.09■■□□□ 1.61
MBD3-209ENST00000592012 TWISTNBQ3B726 338 aaPredicted RBP25.09■■□□□ 1.61
MBD3-209ENST00000592012 C8orf58Q8NAV2 365 aa25.09■■□□□ 1.61
MBD3-209ENST00000592012 ZNF142P52746 1687 aaPredicted RBP25.08■■□□□ 1.61
MBD3-209ENST00000592012 HDAC1Q13547 482 aaPredicted RBP25.08■■□□□ 1.61
MBD3-209ENST00000592012 ARHGAP45Q92619 1136 aa25.08■■□□□ 1.61
MBD3-209ENST00000592012 NLRP6P59044 892 aa25.08■■□□□ 1.6
MBD3-209ENST00000592012 ADAMTSL3P82987 1691 aa25.07■■□□□ 1.6
MBD3-209ENST00000592012 ARHGEF10O15013 1369 aa25.07■■□□□ 1.6
MBD3-209ENST00000592012 AMPHP49418 695 aa25.05■■□□□ 1.6
MBD3-209ENST00000592012 DDRGK1Q96HY6 314 aa25.03■■□□□ 1.6
MBD3-209ENST00000592012 CHL1O00533 1208 aa25.03■■□□□ 1.6
MBD3-209ENST00000592012 MCM10Q7L590 875 aa25.03■■□□□ 1.6
MBD3-209ENST00000592012 VIRMAQ69YN4 1812 aaKnown RBP25.03■■□□□ 1.6
MBD3-209ENST00000592012 KDRP35968 1356 aa25.02■■□□□ 1.6
MBD3-209ENST00000592012 EYA1Q99502 592 aa25.02■■□□□ 1.6
MBD3-209ENST00000592012 NUTM2GQ5VZR2 741 aa25.01■■□□□ 1.59
MBD3-209ENST00000592012 ABTB2Q8N961 1025 aa25.01■■□□□ 1.59
MBD3-209ENST00000592012 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
MBD3-209ENST00000592012 MARF1Q9Y4F3 1742 aaKnown RBP25.01■■□□□ 1.59
MBD3-209ENST00000592012 IGSF1Q8N6C5 1336 aa25■■□□□ 1.59
MBD3-209ENST00000592012 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
MBD3-209ENST00000592012 ZBTB7BO15156 539 aaPredicted RBP25■■□□□ 1.59
MBD3-209ENST00000592012 SMC5Q8IY18 1101 aa24.99■■□□□ 1.59
MBD3-209ENST00000592012 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
MBD3-209ENST00000592012 KIF24Q5T7B8 1368 aa24.98■■□□□ 1.59
MBD3-209ENST00000592012 USP54Q70EL1 1684 aa24.98■■□□□ 1.59
MBD3-209ENST00000592012 ABCC4O15439 1325 aa24.97■■□□□ 1.59
MBD3-209ENST00000592012 HOXC9P31274 260 aa24.97■■□□□ 1.59
MBD3-209ENST00000592012 CRB1P82279 1406 aa24.97■■□□□ 1.59
MBD3-209ENST00000592012 FOXO3O43524 673 aa24.96■■□□□ 1.59
MBD3-209ENST00000592012 SEC24BO95487 1268 aa24.95■■□□□ 1.58
MBD3-209ENST00000592012 KRT24Q2M2I5 525 aa24.95■■□□□ 1.58
MBD3-209ENST00000592012 CHMP4BQ9H444 224 aaKnown RBP24.95■■□□□ 1.58
MBD3-209ENST00000592012 KIAA0232Q92628 1395 aa24.94■■□□□ 1.58
MBD3-209ENST00000592012 USP19O94966 1318 aa24.94■■□□□ 1.58
MBD3-209ENST00000592012 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
MBD3-209ENST00000592012 API5Q9BZZ5 524 aaKnown RBP24.94■■□□□ 1.58
MBD3-209ENST00000592012 HAP1P54257 671 aaPredicted RBP24.93■■□□□ 1.58
MBD3-209ENST00000592012 NPHP4O75161 1426 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms