RNA–Protein interactions for RNA: ENST00000590694.5

NEDD4L-231, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 165 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-231	ENST00000590694	ELOA	Q14241	798 aa	Known RBP	9.3	□□□□□ -0.92
NEDD4L-231	ENST00000590694	MAP7D1	Q3KQU3	841 aa		9.3	□□□□□ -0.92
NEDD4L-231	ENST00000590694	C4orf48	Q5BLP8	95 aa		9.3	□□□□□ -0.92
NEDD4L-231	ENST00000590694	SLC10A4	Q96EP9	437 aa		9.3	□□□□□ -0.92
NEDD4L-231	ENST00000590694	ZBTB24	O43167	697 aa	Predicted RBP	9.29	□□□□□ -0.92
NEDD4L-231	ENST00000590694	SH3BP2	P78314	561 aa		9.29	□□□□□ -0.92
NEDD4L-231	ENST00000590694	MKRN1	Q9UHC7	482 aa	Known RBP	9.29	□□□□□ -0.92
NEDD4L-231	ENST00000590694	CARNS1	A5YM72	827 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	TMEM88B	A6NKF7	163 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	RNF223	E7ERA6	249 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	BRD1	O95696	1058 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	GGCX	P38435	758 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	ANKLE1	Q8NAG6	615 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	C1QTNF2	Q9BXJ5	285 aa		9.28	□□□□□ -0.92
NEDD4L-231	ENST00000590694	FAM196B	A6NMK8	535 aa		9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	ATP5J2-PTCD1	G3V325	749 aa		9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	EML3	Q32P44	896 aa		9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TRAF7	Q6Q0C0	670 aa		9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	ZMIZ1	Q9ULJ6	1067 aa		9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	NOVA2	Q9UNW9	492 aa	Known RBP	9.27	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L15	C9J2P7	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	PATL2	C9JE40	543 aa	Known RBP	9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L10	C9JJH3	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L13	C9JLJ4	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L12	C9JPN9	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L11	C9JVI0	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L21	D6R901	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L18	D6R9N7	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L22	D6RA61	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L17	D6RBQ6	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L19	D6RCP7	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L20	D6RJB6	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	GIGYF1	O75420	1035 aa	Predicted RBP	9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	RASA1	P20936	1047 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	USP17L24	Q0WX57	530 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TRIM32	Q13049	653 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	NBPF20	Q3BBV1	942 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	RNF20	Q5VTR2	975 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	LARP1	Q6PKG0	1096 aa	Known RBP	9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TRMT44	Q8IYL2	757 aa	Known RBP	9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	DOLK	Q9UPQ8	538 aa		9.26	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TSGA10IP	Q3SY00	556 aa		9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	CRTC2	Q53ET0	693 aa	Predicted RBP	9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	PLA2G2C	Q5R387	149 aa		9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	STK32A	Q8WU08	396 aa		9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	CDV3	Q9UKY7	258 aa	Known RBP	9.25	□□□□□ -0.93
NEDD4L-231	ENST00000590694	KCNA1	Q09470	495 aa		9.24	□□□□□ -0.93
NEDD4L-231	ENST00000590694	PTK7	Q13308	1070 aa		9.24	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TMEM164	Q5U3C3	297 aa		9.24	□□□□□ -0.93
NEDD4L-231	ENST00000590694	SPNS2	Q8IVW8	549 aa		9.24	□□□□□ -0.93
NEDD4L-231	ENST00000590694	PCDH10	Q9P2E7	1040 aa		9.24	□□□□□ -0.93
NEDD4L-231	ENST00000590694	ESPN	B1AK53	854 aa		9.23	□□□□□ -0.93
NEDD4L-231	ENST00000590694	WNT7B	P56706	349 aa		9.23	□□□□□ -0.93
NEDD4L-231	ENST00000590694	OXLD1	Q5BKU9	147 aa		9.23	□□□□□ -0.93
NEDD4L-231	ENST00000590694	TRIM50	Q86XT4	487 aa		9.23	□□□□□ -0.93
NEDD4L-231	ENST00000590694	NOD1	Q9Y239	953 aa		9.23	□□□□□ -0.93
NEDD4L-231	ENST00000590694	PPP1R18	Q6NYC8	613 aa		9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	CCDC125	Q86Z20	511 aa		9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	SEPT12	Q8IYM1	358 aa		9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	OGFOD1	Q8N543	542 aa		9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	CCDC9	Q9Y3X0	531 aa	Known RBP	9.22	□□□□□ -0.93
NEDD4L-231	ENST00000590694	VARS	P26640	1264 aa	Known RBP	9.21	□□□□□ -0.94
NEDD4L-231	ENST00000590694	RPIA	P49247	311 aa		9.21	□□□□□ -0.94
NEDD4L-231	ENST00000590694	ATP1A2	P50993	1020 aa		9.21	□□□□□ -0.94
NEDD4L-231	ENST00000590694	SKOR1	P84550	965 aa		9.21	□□□□□ -0.94
NEDD4L-231	ENST00000590694	B4GALNT3	Q6L9W6	998 aa		9.21	□□□□□ -0.94
NEDD4L-231	ENST00000590694	CLDN10	P78369	228 aa		9.2	□□□□□ -0.94
NEDD4L-231	ENST00000590694	ANKMY2	Q8IV38	441 aa		9.2	□□□□□ -0.94
NEDD4L-231	ENST00000590694	FAM200A	Q8TCP9	573 aa		9.2	□□□□□ -0.94
NEDD4L-231	ENST00000590694	DNAAF2	Q9NVR5	837 aa	Known RBP	9.2	□□□□□ -0.94
NEDD4L-231	ENST00000590694	PCDHB11	Q9Y5F2	797 aa		9.2	□□□□□ -0.94
NEDD4L-231	ENST00000590694	SIRT1	Q96EB6	747 aa		9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	ZNF594	Q96JF6	807 aa	Predicted RBP	9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	KCTD15	Q96SI1	283 aa	Predicted RBP	9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	GZF1	Q9H116	711 aa	Predicted RBP	9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	MAP4K5	Q9Y4K4	846 aa		9.19	□□□□□ -0.94
NEDD4L-231	ENST00000590694	GTF2I	P78347	998 aa		9.18	□□□□□ -0.94
NEDD4L-231	ENST00000590694	VASH1	Q7L8A9	365 aa	Predicted RBP	9.18	□□□□□ -0.94
NEDD4L-231	ENST00000590694	LARGE2	Q8N3Y3	721 aa		9.18	□□□□□ -0.94
NEDD4L-231	ENST00000590694	CD2BP2	O95400	341 aa	Known RBP	9.17	□□□□□ -0.94
NEDD4L-231	ENST00000590694	DPYD	Q12882	1025 aa		9.17	□□□□□ -0.94
NEDD4L-231	ENST00000590694	USP4	Q13107	963 aa		9.17	□□□□□ -0.94
NEDD4L-231	ENST00000590694	SIX5	Q8N196	739 aa		9.17	□□□□□ -0.94
NEDD4L-231	ENST00000590694	EHBP1	Q8NDI1	1231 aa		9.17	□□□□□ -0.94
NEDD4L-231	ENST00000590694	RAB15	P59190	212 aa		9.16	□□□□□ -0.94
NEDD4L-231	ENST00000590694	FAM69C	Q0P6D2	419 aa		9.16	□□□□□ -0.94
NEDD4L-231	ENST00000590694	KIAA1024	Q9UPX6	916 aa		9.16	□□□□□ -0.94
NEDD4L-231	ENST00000590694	ZBTB7B	O15156	539 aa	Predicted RBP	9.15	□□□□□ -0.94
NEDD4L-231	ENST00000590694	SWI5	Q1ZZU3	235 aa		9.15	□□□□□ -0.94
NEDD4L-231	ENST00000590694	INTS6L	Q5JSJ4	861 aa	Known RBP	9.15	□□□□□ -0.94
NEDD4L-231	ENST00000590694	RC3H1	Q5TC82	1133 aa	Known RBP	9.15	□□□□□ -0.94
NEDD4L-231	ENST00000590694	CLP1	Q92989	425 aa	Known RBP	9.15	□□□□□ -0.94
NEDD4L-231	ENST00000590694	DKK1	O94907	266 aa		9.14	□□□□□ -0.95
NEDD4L-231	ENST00000590694	PSME1	Q06323	249 aa		9.14	□□□□□ -0.95
NEDD4L-231	ENST00000590694	ARID5B	Q14865	1188 aa		9.14	□□□□□ -0.95
NEDD4L-231	ENST00000590694	TMCO4	Q5TGY1	634 aa		9.14	□□□□□ -0.95
NEDD4L-231	ENST00000590694	CCDC102B	Q68D86	513 aa		9.14	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms