RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
NEDD4L-228ENST00000590248 LTN1O94822 1766 aa19.29■□□□□ 0.68
NEDD4L-228ENST00000590248 TMF1P82094 1093 aa19.28■□□□□ 0.68
NEDD4L-228ENST00000590248 CRB1P82279 1406 aa19.27■□□□□ 0.68
NEDD4L-228ENST00000590248 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
NEDD4L-228ENST00000590248 USP54Q70EL1 1684 aa19.27■□□□□ 0.67
NEDD4L-228ENST00000590248 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
NEDD4L-228ENST00000590248 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
NEDD4L-228ENST00000590248 THRAP3Q9Y2W1 955 aaKnown RBP19.26■□□□□ 0.67
NEDD4L-228ENST00000590248 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
NEDD4L-228ENST00000590248 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
NEDD4L-228ENST00000590248 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
NEDD4L-228ENST00000590248 TRIM37O94972 964 aa19.24■□□□□ 0.67
NEDD4L-228ENST00000590248 PARP4Q9UKK3 1724 aaKnown RBP19.24■□□□□ 0.67
NEDD4L-228ENST00000590248 FBLN1P23142 703 aa19.23■□□□□ 0.67
NEDD4L-228ENST00000590248 EN1Q05925 392 aaPredicted RBP19.23■□□□□ 0.67
NEDD4L-228ENST00000590248 WNK3Q9BYP7 1800 aa19.23■□□□□ 0.67
NEDD4L-228ENST00000590248 TNS1Q9HBL0 1735 aaKnown RBP19.22■□□□□ 0.67
NEDD4L-228ENST00000590248 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
NEDD4L-228ENST00000590248 BAG6P46379 1132 aa19.22■□□□□ 0.67
NEDD4L-228ENST00000590248 FAM196AQ6ZSG2 479 aa19.22■□□□□ 0.67
NEDD4L-228ENST00000590248 OVOS2A0A0J9YW53 1432 aa19.21■□□□□ 0.67
NEDD4L-228ENST00000590248 OVOS2Q6IE36 1432 aa19.21■□□□□ 0.67
NEDD4L-228ENST00000590248 ANKRD36BQ8N2N9 1353 aa19.2■□□□□ 0.66
NEDD4L-228ENST00000590248 CARD10Q9BWT7 1032 aa19.19■□□□□ 0.66
NEDD4L-228ENST00000590248 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
NEDD4L-228ENST00000590248 DDB1Q16531 1140 aa19.18■□□□□ 0.66
NEDD4L-228ENST00000590248 COG3Q96JB2 828 aa19.18■□□□□ 0.66
NEDD4L-228ENST00000590248 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
NEDD4L-228ENST00000590248 EZH2Q15910 746 aaKnown RBP19.17■□□□□ 0.66
NEDD4L-228ENST00000590248 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
NEDD4L-228ENST00000590248 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
NEDD4L-228ENST00000590248 MYOM1P52179 1685 aa19.17■□□□□ 0.66
NEDD4L-228ENST00000590248 FYB1O15117 783 aa19.16■□□□□ 0.66
NEDD4L-228ENST00000590248 APBA3O96018 575 aa19.16■□□□□ 0.66
NEDD4L-228ENST00000590248 CDCA8Q53HL2 280 aa19.16■□□□□ 0.66
NEDD4L-228ENST00000590248 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 ANKRD24Q8TF21 1146 aa19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 NLRP2Q9NX02 1062 aa19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 ERBB3P21860 1342 aa19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 ABCC6O95255 1503 aa19.15■□□□□ 0.66
NEDD4L-228ENST00000590248 PEAK1Q9H792 1746 aa19.14■□□□□ 0.66
NEDD4L-228ENST00000590248 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
NEDD4L-228ENST00000590248 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
NEDD4L-228ENST00000590248 CARD14Q9BXL6 1004 aa19.14■□□□□ 0.65
NEDD4L-228ENST00000590248 PSDA5PKW4 1024 aaPredicted RBP19.13■□□□□ 0.65
NEDD4L-228ENST00000590248 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
NEDD4L-228ENST00000590248 MARCH10Q8NA82 808 aaPredicted RBP19.13■□□□□ 0.65
NEDD4L-228ENST00000590248 IP6K1Q92551 441 aa19.13■□□□□ 0.65
NEDD4L-228ENST00000590248 DISP2A7MBM2 1401 aa19.12■□□□□ 0.65
NEDD4L-228ENST00000590248 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
NEDD4L-228ENST00000590248 RRS1Q15050 365 aaKnown RBP19.12■□□□□ 0.65
NEDD4L-228ENST00000590248 PTF1AQ7RTS3 328 aa19.12■□□□□ 0.65
NEDD4L-228ENST00000590248 CAMKK2Q96RR4 588 aa19.12■□□□□ 0.65
NEDD4L-228ENST00000590248 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
NEDD4L-228ENST00000590248 EXOC5O00471 708 aa19.11■□□□□ 0.65
NEDD4L-228ENST00000590248 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.65
NEDD4L-228ENST00000590248 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
NEDD4L-228ENST00000590248 OVOS2A0A0G2JMS6 1433 aa19.1■□□□□ 0.65
NEDD4L-228ENST00000590248 AMPHP49418 695 aa19.1■□□□□ 0.65
NEDD4L-228ENST00000590248 HOXC9P31274 260 aa19.09■□□□□ 0.65
NEDD4L-228ENST00000590248 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.64
NEDD4L-228ENST00000590248 SRCAPQ6ZRS2 3230 aa19.07■□□□□ 0.64
NEDD4L-228ENST00000590248 IL2RBP14784 551 aa19.07■□□□□ 0.64
NEDD4L-228ENST00000590248 R3HDM1Q15032 1099 aaKnown RBP19.06■□□□□ 0.64
NEDD4L-228ENST00000590248 MAP2P11137 1827 aaKnown RBP19.05■□□□□ 0.64
NEDD4L-228ENST00000590248 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
NEDD4L-228ENST00000590248 RREB1Q92766 1687 aa19.05■□□□□ 0.64
NEDD4L-228ENST00000590248 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
NEDD4L-228ENST00000590248 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
NEDD4L-228ENST00000590248 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
NEDD4L-228ENST00000590248 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
NEDD4L-228ENST00000590248 KCNQ2O43526 872 aa19.02■□□□□ 0.64
NEDD4L-228ENST00000590248 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.64
NEDD4L-228ENST00000590248 ACSBG1Q96GR2 724 aa19.02■□□□□ 0.64
NEDD4L-228ENST00000590248 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
NEDD4L-228ENST00000590248 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
NEDD4L-228ENST00000590248 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
NEDD4L-228ENST00000590248 NBPF4Q96M43 638 aa19■□□□□ 0.63
NEDD4L-228ENST00000590248 PANK3Q9H999 370 aa19■□□□□ 0.63
NEDD4L-228ENST00000590248 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
NEDD4L-228ENST00000590248 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
NEDD4L-228ENST00000590248 PLSCR1O15162 318 aa18.99■□□□□ 0.63
NEDD4L-228ENST00000590248 BCL9O00512 1426 aa18.99■□□□□ 0.63
NEDD4L-228ENST00000590248 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
NEDD4L-228ENST00000590248 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
NEDD4L-228ENST00000590248 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
NEDD4L-228ENST00000590248 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
NEDD4L-228ENST00000590248 PROM2Q8N271 834 aa18.97■□□□□ 0.63
NEDD4L-228ENST00000590248 SHANK3Q9BYB0 1731 aa18.96■□□□□ 0.63
NEDD4L-228ENST00000590248 RGPD3A6NKT7 1758 aaPredicted RBP18.96■□□□□ 0.63
NEDD4L-228ENST00000590248 RGPD4Q7Z3J3 1758 aa18.96■□□□□ 0.63
NEDD4L-228ENST00000590248 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 MEGF6O75095 1541 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 INSRP06213 1382 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 ANKRD26Q9UPS8 1709 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 NBPF14Q5TI25 921 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 BTAF1O14981 1849 aa18.95■□□□□ 0.62
NEDD4L-228ENST00000590248 FLT4P35916 1363 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms