RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 CABP1Q9NZU7 370 aa8.6□□□□□ -1.03
LDLRAD4-213ENST00000590115 PHF8Q9UPP1 1060 aa8.6□□□□□ -1.03
LDLRAD4-213ENST00000590115 PAPPAQ13219 1627 aa8.6□□□□□ -1.03
LDLRAD4-213ENST00000590115 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
LDLRAD4-213ENST00000590115 A0A1W2PP64 1363 aa8.6□□□□□ -1.03
LDLRAD4-213ENST00000590115 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
LDLRAD4-213ENST00000590115 PUS7Q96PZ0 661 aaKnown RBP8.59□□□□□ -1.03
LDLRAD4-213ENST00000590115 QSER1Q2KHR3 1735 aa8.59□□□□□ -1.03
LDLRAD4-213ENST00000590115 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
LDLRAD4-213ENST00000590115 ACEP12821 1306 aa8.58□□□□□ -1.04
LDLRAD4-213ENST00000590115 EVC2Q86UK5 1308 aa8.58□□□□□ -1.04
LDLRAD4-213ENST00000590115 USP6P35125 1406 aa8.58□□□□□ -1.04
LDLRAD4-213ENST00000590115 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
LDLRAD4-213ENST00000590115 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 PSME1Q06323 249 aa8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 SYT17Q9BSW7 474 aa8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 FHDC1Q9C0D6 1143 aaPredicted RBP8.57□□□□□ -1.04
LDLRAD4-213ENST00000590115 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
LDLRAD4-213ENST00000590115 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
LDLRAD4-213ENST00000590115 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
LDLRAD4-213ENST00000590115 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
LDLRAD4-213ENST00000590115 RGPD5Q99666 1765 aa8.56□□□□□ -1.04
LDLRAD4-213ENST00000590115 KAT6BQ8WYB5 2073 aa8.55□□□□□ -1.04
LDLRAD4-213ENST00000590115 BARGINQ6ZT62 677 aa8.55□□□□□ -1.04
LDLRAD4-213ENST00000590115 ANKRD36BQ8N2N9 1353 aa8.55□□□□□ -1.04
LDLRAD4-213ENST00000590115 MAP3K5Q99683 1374 aa8.55□□□□□ -1.04
LDLRAD4-213ENST00000590115 OVOS2A0A0J9YW53 1432 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 OVOS2Q6IE36 1432 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 SLIT3O75094 1523 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 ZEB1P37275 1124 aaPredicted RBP8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 TMF1P82094 1093 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 PTF1AQ7RTS3 328 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 NFAT5O94916 1531 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 USP19O94966 1318 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
LDLRAD4-213ENST00000590115 COL18A1P39060 1754 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 NHSQ6T4R5 1651 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 BTAF1O14981 1849 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 FBLN1P23142 703 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 CHRNA2Q15822 529 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 PROM2Q8N271 834 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 PRDM11Q9NQV5 511 aa8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 ATF5Q9Y2D1 282 aaPredicted RBP8.53□□□□□ -1.04
LDLRAD4-213ENST00000590115 USP31Q70CQ4 1352 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 PLSCR1O15162 318 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 AMER1Q5JTC6 1135 aaPredicted RBP8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 NME9Q86XW9 330 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 PANK3Q9H999 370 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
LDLRAD4-213ENST00000590115 PCNTO95613 3336 aa8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 FYB1O15117 783 aa8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 USP35Q9P2H5 1018 aa8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 EDC4Q6P2E9 1401 aaKnown RBP8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
LDLRAD4-213ENST00000590115 KTN1Q86UP2 1357 aaKnown RBP8.5□□□□□ -1.05
LDLRAD4-213ENST00000590115 LARP1Q6PKG0 1096 aaKnown RBP8.5□□□□□ -1.05
LDLRAD4-213ENST00000590115 KIF20BQ96Q89 1820 aa8.5□□□□□ -1.05
LDLRAD4-213ENST00000590115 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
LDLRAD4-213ENST00000590115 TMC1Q8TDI8 760 aa8.49□□□□□ -1.05
LDLRAD4-213ENST00000590115 WDR90Q96KV7 1748 aa8.49□□□□□ -1.05
LDLRAD4-213ENST00000590115 ANKRD26Q9UPS8 1709 aa8.49□□□□□ -1.05
LDLRAD4-213ENST00000590115 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 BCL9O00512 1426 aa8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 NGDNQ8NEJ9 315 aaKnown RBP8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
LDLRAD4-213ENST00000590115 ATP10DQ9P241 1426 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 HSPA6P17066 643 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 SLC15A2Q16348 729 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 ADCY9O60503 1353 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 CPDO75976 1380 aa8.47□□□□□ -1.05
LDLRAD4-213ENST00000590115 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 ARXQ96QS3 562 aa8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 ZNF692Q9BU19 519 aaPredicted RBP8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 TTC21AQ8NDW8 1320 aa8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 CRB1P82279 1406 aa8.46□□□□□ -1.06
LDLRAD4-213ENST00000590115 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 LY75O60449 1722 aa8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 NPC1L1Q9UHC9 1359 aa8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 SMG6Q86US8 1419 aaKnown RBP8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
LDLRAD4-213ENST00000590115 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
LDLRAD4-213ENST00000590115 GCP02774 474 aa8.44□□□□□ -1.06
LDLRAD4-213ENST00000590115 GPR162Q16538 588 aa8.44□□□□□ -1.06
LDLRAD4-213ENST00000590115 TXNRD1Q16881 649 aa8.44□□□□□ -1.06
LDLRAD4-213ENST00000590115 CDCA8Q53HL2 280 aa8.44□□□□□ -1.06
LDLRAD4-213ENST00000590115 STK32BQ9NY57 414 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms