RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
POLR2E-207ENST00000590060 MED1Q15648 1581 aaPredicted RBP25.29■■□□□ 1.64
POLR2E-207ENST00000590060 SPATA31A3Q5VYP0 1347 aa25.29■■□□□ 1.64
POLR2E-207ENST00000590060 GCP02774 474 aa25.28■■□□□ 1.64
POLR2E-207ENST00000590060 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
POLR2E-207ENST00000590060 CCDC27Q2M243 656 aa25.28■■□□□ 1.64
POLR2E-207ENST00000590060 PLEKHF1Q96S99 279 aa25.27■■□□□ 1.64
POLR2E-207ENST00000590060 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
POLR2E-207ENST00000590060 ZNF521Q96K83 1311 aa25.27■■□□□ 1.64
POLR2E-207ENST00000590060 NHSL1Q5SYE7 1610 aa25.26■■□□□ 1.63
POLR2E-207ENST00000590060 SOS2Q07890 1332 aaPredicted RBP25.26■■□□□ 1.63
POLR2E-207ENST00000590060 HMOX1P09601 288 aa25.25■■□□□ 1.63
POLR2E-207ENST00000590060 IP6K1Q92551 441 aa25.25■■□□□ 1.63
POLR2E-207ENST00000590060 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
POLR2E-207ENST00000590060 RGPD1P0DJD0 1748 aa25.24■■□□□ 1.63
POLR2E-207ENST00000590060 ZBTB7CA1YPR0 619 aa25.24■■□□□ 1.63
POLR2E-207ENST00000590060 E9PSI1 815 aa25.24■■□□□ 1.63
POLR2E-207ENST00000590060 NEUROD2Q15784 382 aa25.23■■□□□ 1.63
POLR2E-207ENST00000590060 ABCC6O95255 1503 aa25.22■■□□□ 1.63
POLR2E-207ENST00000590060 TMPOP42166 694 aaKnown RBP25.22■■□□□ 1.63
POLR2E-207ENST00000590060 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
POLR2E-207ENST00000590060 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
POLR2E-207ENST00000590060 RRP7AQ9Y3A4 280 aaKnown RBP25.22■■□□□ 1.63
POLR2E-207ENST00000590060 SULT6B1Q6IMI4 303 aa25.21■■□□□ 1.63
POLR2E-207ENST00000590060 ARHGEF25Q86VW2 580 aa25.21■■□□□ 1.63
POLR2E-207ENST00000590060 WDR63Q8IWG1 891 aa25.21■■□□□ 1.63
POLR2E-207ENST00000590060 IGSF1Q8N6C5 1336 aa25.2■■□□□ 1.62
POLR2E-207ENST00000590060 PLEKHG5O94827 1062 aa25.19■■□□□ 1.62
POLR2E-207ENST00000590060 NFE2L2Q16236 605 aa25.19■■□□□ 1.62
POLR2E-207ENST00000590060 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
POLR2E-207ENST00000590060 CDCA7LQ96GN5 454 aa25.18■■□□□ 1.62
POLR2E-207ENST00000590060 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
POLR2E-207ENST00000590060 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
POLR2E-207ENST00000590060 AHDC1Q5TGY3 1603 aaPredicted RBP25.17■■□□□ 1.62
POLR2E-207ENST00000590060 HAP1P54257 671 aaPredicted RBP25.17■■□□□ 1.62
POLR2E-207ENST00000590060 RIPK4P57078 832 aa25.17■■□□□ 1.62
POLR2E-207ENST00000590060 KDRP35968 1356 aa25.17■■□□□ 1.62
POLR2E-207ENST00000590060 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
POLR2E-207ENST00000590060 SUPT16HQ9Y5B9 1047 aaKnown RBP25.16■■□□□ 1.62
POLR2E-207ENST00000590060 CRYBG1Q9Y4K1 1723 aa25.15■■□□□ 1.62
POLR2E-207ENST00000590060 TOM1O60784 492 aa25.15■■□□□ 1.62
POLR2E-207ENST00000590060 LTV1Q96GA3 475 aaPredicted RBP25.15■■□□□ 1.62
POLR2E-207ENST00000590060 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
POLR2E-207ENST00000590060 EYA1Q99502 592 aa25.14■■□□□ 1.62
POLR2E-207ENST00000590060 CPDO75976 1380 aa25.14■■□□□ 1.61
POLR2E-207ENST00000590060 IL16Q14005 1332 aa25.12■■□□□ 1.61
POLR2E-207ENST00000590060 ZC3H6P61129 1189 aaKnown RBP25.12■■□□□ 1.61
POLR2E-207ENST00000590060 DUSP27Q5VZP5 1158 aa25.12■■□□□ 1.61
POLR2E-207ENST00000590060 AEBP1Q8IUX7 1158 aa25.12■■□□□ 1.61
POLR2E-207ENST00000590060 RCAN3Q9UKA8 241 aa25.12■■□□□ 1.61
POLR2E-207ENST00000590060 GAS2L2Q8NHY3 880 aa25.1■■□□□ 1.61
POLR2E-207ENST00000590060 ANKRD24Q8TF21 1146 aa25.09■■□□□ 1.61
POLR2E-207ENST00000590060 LRRC59Q96AG4 307 aaKnown RBP25.09■■□□□ 1.61
POLR2E-207ENST00000590060 PHACTR3Q96KR7 559 aa25.09■■□□□ 1.61
POLR2E-207ENST00000590060 TRMT2AQ8IZ69 625 aaKnown RBP25.08■■□□□ 1.61
POLR2E-207ENST00000590060 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
POLR2E-207ENST00000590060 ABCA3Q99758 1704 aa25.07■■□□□ 1.6
POLR2E-207ENST00000590060 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
POLR2E-207ENST00000590060 TRIM35Q9UPQ4 493 aa25.07■■□□□ 1.6
POLR2E-207ENST00000590060 KIAA0232Q92628 1395 aa25.06■■□□□ 1.6
POLR2E-207ENST00000590060 PRDM11Q9NQV5 511 aa25.05■■□□□ 1.6
POLR2E-207ENST00000590060 ERBB3P21860 1342 aa25.05■■□□□ 1.6
POLR2E-207ENST00000590060 CAMTA1Q9Y6Y1 1673 aa25.04■■□□□ 1.6
POLR2E-207ENST00000590060 FKBP8Q14318 412 aa25.03■■□□□ 1.6
POLR2E-207ENST00000590060 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
POLR2E-207ENST00000590060 RTF1Q92541 710 aaKnown RBP25.02■■□□□ 1.6
POLR2E-207ENST00000590060 PHLPP1O60346 1717 aa25.02■■□□□ 1.6
POLR2E-207ENST00000590060 NCAPD2Q15021 1401 aa25.02■■□□□ 1.6
POLR2E-207ENST00000590060 SPINK5Q9NQ38 1064 aaPredicted RBP25.01■■□□□ 1.59
POLR2E-207ENST00000590060 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
POLR2E-207ENST00000590060 COL18A1P39060 1754 aa25■■□□□ 1.59
POLR2E-207ENST00000590060 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
POLR2E-207ENST00000590060 ERICH6BQ5W0A0 696 aa25■■□□□ 1.59
POLR2E-207ENST00000590060 GOLGA6L2Q8N9W4 650 aaPredicted RBP25■■□□□ 1.59
POLR2E-207ENST00000590060 NBPF4Q96M43 638 aa25■■□□□ 1.59
POLR2E-207ENST00000590060 RNF123Q5XPI4 1314 aa25■■□□□ 1.59
POLR2E-207ENST00000590060 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
POLR2E-207ENST00000590060 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
POLR2E-207ENST00000590060 GNAI1P63096 354 aa24.99■■□□□ 1.59
POLR2E-207ENST00000590060 USHBP1Q8N6Y0 703 aa24.99■■□□□ 1.59
POLR2E-207ENST00000590060 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
POLR2E-207ENST00000590060 FANCIQ9NVI1 1328 aa24.98■■□□□ 1.59
POLR2E-207ENST00000590060 HTATSF1O43719 755 aaKnown RBP24.98■■□□□ 1.59
POLR2E-207ENST00000590060 RRP1P56182 461 aaKnown RBP24.98■■□□□ 1.59
POLR2E-207ENST00000590060 IFT57Q9NWB7 429 aa24.98■■□□□ 1.59
POLR2E-207ENST00000590060 DLG5Q8TDM6 1919 aa24.98■■□□□ 1.59
POLR2E-207ENST00000590060 PIP4K2BP78356 416 aa24.97■■□□□ 1.59
POLR2E-207ENST00000590060 CHRNA2Q15822 529 aa24.97■■□□□ 1.59
POLR2E-207ENST00000590060 AMOTQ4VCS5 1084 aa24.97■■□□□ 1.59
POLR2E-207ENST00000590060 AXIN2Q9Y2T1 843 aa24.97■■□□□ 1.59
POLR2E-207ENST00000590060 LMO7Q8WWI1 1683 aa24.97■■□□□ 1.59
POLR2E-207ENST00000590060 COL16A1Q07092 1604 aaPredicted RBP24.97■■□□□ 1.59
POLR2E-207ENST00000590060 MTHFSDQ2M296 383 aaKnown RBP24.96■■□□□ 1.59
POLR2E-207ENST00000590060 PLEKHO1Q53GL0 409 aaPredicted RBP24.96■■□□□ 1.59
POLR2E-207ENST00000590060 NLRP2Q9NX02 1062 aa24.96■■□□□ 1.59
POLR2E-207ENST00000590060 MAP3K5Q99683 1374 aa24.95■■□□□ 1.59
POLR2E-207ENST00000590060 RGPD5Q99666 1765 aa24.95■■□□□ 1.58
POLR2E-207ENST00000590060 RAPGEF4Q8WZA2 1011 aa24.94■■□□□ 1.58
POLR2E-207ENST00000590060 GNAT3A8MTJ3 354 aa24.93■■□□□ 1.58
POLR2E-207ENST00000590060 LAS1LQ9Y4W2 734 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms