RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 USP19O94966 1318 aa17.25■□□□□ 0.35
CAPNS1-209ENST00000590049 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
CAPNS1-209ENST00000590049 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
CAPNS1-209ENST00000590049 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
CAPNS1-209ENST00000590049 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
CAPNS1-209ENST00000590049 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-209ENST00000590049 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
CAPNS1-209ENST00000590049 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
CAPNS1-209ENST00000590049 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.34
CAPNS1-209ENST00000590049 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
CAPNS1-209ENST00000590049 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
CAPNS1-209ENST00000590049 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
CAPNS1-209ENST00000590049 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 CRB1P82279 1406 aa17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 KIF1BO60333 1816 aa17.19■□□□□ 0.34
CAPNS1-209ENST00000590049 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
CAPNS1-209ENST00000590049 RGS19P49795 217 aa17.17■□□□□ 0.34
CAPNS1-209ENST00000590049 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
CAPNS1-209ENST00000590049 ABHD8Q96I13 439 aa17.17■□□□□ 0.34
CAPNS1-209ENST00000590049 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
CAPNS1-209ENST00000590049 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
CAPNS1-209ENST00000590049 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
CAPNS1-209ENST00000590049 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
CAPNS1-209ENST00000590049 LRRC4BQ9NT99 713 aa17.14■□□□□ 0.33
CAPNS1-209ENST00000590049 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
CAPNS1-209ENST00000590049 AKAP12Q02952 1782 aa17.14■□□□□ 0.33
CAPNS1-209ENST00000590049 CPDO75976 1380 aa17.14■□□□□ 0.33
CAPNS1-209ENST00000590049 TMEM132EQ6IEE7 984 aa17.13■□□□□ 0.33
CAPNS1-209ENST00000590049 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
CAPNS1-209ENST00000590049 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
CAPNS1-209ENST00000590049 PCGF6Q9BYE7 350 aa17.12■□□□□ 0.33
CAPNS1-209ENST00000590049 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
CAPNS1-209ENST00000590049 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
CAPNS1-209ENST00000590049 FOXN1O15353 648 aa17.1■□□□□ 0.33
CAPNS1-209ENST00000590049 PPLO60437 1756 aa17.1■□□□□ 0.33
CAPNS1-209ENST00000590049 ITGAEP38570 1179 aa17.09■□□□□ 0.33
CAPNS1-209ENST00000590049 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
CAPNS1-209ENST00000590049 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
CAPNS1-209ENST00000590049 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
CAPNS1-209ENST00000590049 CICQ96RK0 1608 aaPredicted RBP17.08■□□□□ 0.32
CAPNS1-209ENST00000590049 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
CAPNS1-209ENST00000590049 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
CAPNS1-209ENST00000590049 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
CAPNS1-209ENST00000590049 ADGRF5Q8IZF2 1346 aa17.06■□□□□ 0.32
CAPNS1-209ENST00000590049 CCDC85CA6NKD9 419 aa17.06■□□□□ 0.32
CAPNS1-209ENST00000590049 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
CAPNS1-209ENST00000590049 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAPNS1-209ENST00000590049 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
CAPNS1-209ENST00000590049 MSH5O43196 834 aa17.05■□□□□ 0.32
CAPNS1-209ENST00000590049 MSL1Q68DK7 614 aa17.05■□□□□ 0.32
CAPNS1-209ENST00000590049 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
CAPNS1-209ENST00000590049 EXOC5O00471 708 aa17.04■□□□□ 0.32
CAPNS1-209ENST00000590049 PDE4DIPQ5VU43 2346 aa17.04■□□□□ 0.32
CAPNS1-209ENST00000590049 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
CAPNS1-209ENST00000590049 USP6P35125 1406 aa17.03■□□□□ 0.32
CAPNS1-209ENST00000590049 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
CAPNS1-209ENST00000590049 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
CAPNS1-209ENST00000590049 PRR36Q9H6K5 1346 aa17.02■□□□□ 0.32
CAPNS1-209ENST00000590049 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
CAPNS1-209ENST00000590049 PRAM1Q96QH2 718 aa17.02■□□□□ 0.32
CAPNS1-209ENST00000590049 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
CAPNS1-209ENST00000590049 BTAF1O14981 1849 aa16.99■□□□□ 0.31
CAPNS1-209ENST00000590049 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
CAPNS1-209ENST00000590049 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
CAPNS1-209ENST00000590049 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
CAPNS1-209ENST00000590049 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
CAPNS1-209ENST00000590049 TRPM1Q7Z4N2 1603 aa16.97■□□□□ 0.31
CAPNS1-209ENST00000590049 GCP02774 474 aa16.97■□□□□ 0.31
CAPNS1-209ENST00000590049 LBX1P52954 281 aa16.97■□□□□ 0.31
CAPNS1-209ENST00000590049 POGKQ9P215 609 aa16.97■□□□□ 0.31
CAPNS1-209ENST00000590049 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
CAPNS1-209ENST00000590049 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.3
CAPNS1-209ENST00000590049 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.3
CAPNS1-209ENST00000590049 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
CAPNS1-209ENST00000590049 TNRC18O15417 2968 aaPredicted RBP16.94■□□□□ 0.3
CAPNS1-209ENST00000590049 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
CAPNS1-209ENST00000590049 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
CAPNS1-209ENST00000590049 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
CAPNS1-209ENST00000590049 KCNQ4P56696 695 aa16.92■□□□□ 0.3
CAPNS1-209ENST00000590049 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
CAPNS1-209ENST00000590049 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
CAPNS1-209ENST00000590049 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
CAPNS1-209ENST00000590049 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
CAPNS1-209ENST00000590049 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
CAPNS1-209ENST00000590049 PIK3C2AO00443 1686 aa16.89■□□□□ 0.29
CAPNS1-209ENST00000590049 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
CAPNS1-209ENST00000590049 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
CAPNS1-209ENST00000590049 ABCC6O95255 1503 aa16.88■□□□□ 0.29
CAPNS1-209ENST00000590049 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
CAPNS1-209ENST00000590049 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
CAPNS1-209ENST00000590049 PRPF38BQ5VTL8 546 aaKnown RBP16.86■□□□□ 0.29
CAPNS1-209ENST00000590049 WBP1LQ9NX94 342 aa16.86■□□□□ 0.29
CAPNS1-209ENST00000590049 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
CAPNS1-209ENST00000590049 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
CAPNS1-209ENST00000590049 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
CAPNS1-209ENST00000590049 FLAD1Q8NFF5 587 aa16.85■□□□□ 0.29
CAPNS1-209ENST00000590049 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms