RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
GRN-216ENST00000589923 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
GRN-216ENST00000589923 BCL9O00512 1426 aa15.86■□□□□ 0.13
GRN-216ENST00000589923 MARCH10Q8NA82 808 aaPredicted RBP15.86■□□□□ 0.13
GRN-216ENST00000589923 BRD4O60885 1362 aaPredicted RBP15.86■□□□□ 0.13
GRN-216ENST00000589923 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
GRN-216ENST00000589923 PTGER2P43116 358 aa15.85■□□□□ 0.13
GRN-216ENST00000589923 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
GRN-216ENST00000589923 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
GRN-216ENST00000589923 NFAT5O94916 1531 aa15.84■□□□□ 0.13
GRN-216ENST00000589923 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
GRN-216ENST00000589923 DDB1Q16531 1140 aa15.84■□□□□ 0.13
GRN-216ENST00000589923 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
GRN-216ENST00000589923 PAPPAQ13219 1627 aa15.83■□□□□ 0.13
GRN-216ENST00000589923 C11orf95C9JLR9 678 aaPredicted RBP15.83■□□□□ 0.12
GRN-216ENST00000589923 NLRP6P59044 892 aa15.83■□□□□ 0.12
GRN-216ENST00000589923 CABP1Q9NZU7 370 aa15.83■□□□□ 0.12
GRN-216ENST00000589923 WDR17Q8IZU2 1322 aa15.83■□□□□ 0.12
GRN-216ENST00000589923 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
GRN-216ENST00000589923 ZBTB7AO95365 584 aa15.82■□□□□ 0.12
GRN-216ENST00000589923 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
GRN-216ENST00000589923 TOM1L2Q6ZVM7 507 aa15.81■□□□□ 0.12
GRN-216ENST00000589923 ARHGEF25Q86VW2 580 aa15.8■□□□□ 0.12
GRN-216ENST00000589923 SGIP1Q9BQI5 828 aa15.79■□□□□ 0.12
GRN-216ENST00000589923 TNS2Q63HR2 1409 aa15.78■□□□□ 0.12
GRN-216ENST00000589923 MON2Q7Z3U7 1717 aa15.78■□□□□ 0.12
GRN-216ENST00000589923 TXNRD1Q16881 649 aa15.78■□□□□ 0.12
GRN-216ENST00000589923 CEP350Q5VT06 3117 aa15.78■□□□□ 0.12
GRN-216ENST00000589923 ABCC6O95255 1503 aa15.78■□□□□ 0.12
GRN-216ENST00000589923 USP54Q70EL1 1684 aa15.77■□□□□ 0.12
GRN-216ENST00000589923 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
GRN-216ENST00000589923 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
GRN-216ENST00000589923 BTAF1O14981 1849 aa15.76■□□□□ 0.11
GRN-216ENST00000589923 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
GRN-216ENST00000589923 CARD10Q9BWT7 1032 aa15.76■□□□□ 0.11
GRN-216ENST00000589923 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
GRN-216ENST00000589923 CHD4Q14839 1912 aa15.76■□□□□ 0.11
GRN-216ENST00000589923 SLC15A2Q16348 729 aa15.75■□□□□ 0.11
GRN-216ENST00000589923 CDCA7Q9BWT1 371 aaPredicted RBP15.75■□□□□ 0.11
GRN-216ENST00000589923 SOX12O15370 315 aa15.74■□□□□ 0.11
GRN-216ENST00000589923 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
GRN-216ENST00000589923 LTN1O94822 1766 aa15.73■□□□□ 0.11
GRN-216ENST00000589923 COL24A1Q17RW2 1714 aa15.72■□□□□ 0.11
GRN-216ENST00000589923 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
GRN-216ENST00000589923 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
GRN-216ENST00000589923 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
GRN-216ENST00000589923 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
GRN-216ENST00000589923 TUBGCP6Q96RT7 1819 aa15.71■□□□□ 0.11
GRN-216ENST00000589923 MTFR1LQ9H019 292 aa15.71■□□□□ 0.11
GRN-216ENST00000589923 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
GRN-216ENST00000589923 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
GRN-216ENST00000589923 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
GRN-216ENST00000589923 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
GRN-216ENST00000589923 QSER1Q2KHR3 1735 aa15.7■□□□□ 0.1
GRN-216ENST00000589923 EXOC5O00471 708 aa15.69■□□□□ 0.1
GRN-216ENST00000589923 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
GRN-216ENST00000589923 L3MBTL2Q969R5 705 aa15.69■□□□□ 0.1
GRN-216ENST00000589923 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
GRN-216ENST00000589923 MAP3K5Q99683 1374 aa15.69■□□□□ 0.1
GRN-216ENST00000589923 ERBB3P21860 1342 aa15.68■□□□□ 0.1
GRN-216ENST00000589923 LRRC4BQ9NT99 713 aa15.68■□□□□ 0.1
GRN-216ENST00000589923 USP31Q70CQ4 1352 aa15.67■□□□□ 0.1
GRN-216ENST00000589923 KTN1Q86UP2 1357 aaKnown RBP15.67■□□□□ 0.1
GRN-216ENST00000589923 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
GRN-216ENST00000589923 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
GRN-216ENST00000589923 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
GRN-216ENST00000589923 ARXQ96QS3 562 aa15.65■□□□□ 0.1
GRN-216ENST00000589923 NME9Q86XW9 330 aa15.64■□□□□ 0.09
GRN-216ENST00000589923 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
GRN-216ENST00000589923 DOT1LQ8TEK3 1739 aa15.63■□□□□ 0.09
GRN-216ENST00000589923 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
GRN-216ENST00000589923 FAM208AQ9UK61 1670 aaKnown RBP15.63■□□□□ 0.09
GRN-216ENST00000589923 LY75O60449 1722 aa15.63■□□□□ 0.09
GRN-216ENST00000589923 IL2RBP14784 551 aa15.62■□□□□ 0.09
GRN-216ENST00000589923 C1QTNF8P60827 252 aa15.62■□□□□ 0.09
GRN-216ENST00000589923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
GRN-216ENST00000589923 NLRP2Q9NX02 1062 aa15.62■□□□□ 0.09
GRN-216ENST00000589923 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
GRN-216ENST00000589923 SIN3AQ96ST3 1273 aa15.61■□□□□ 0.09
GRN-216ENST00000589923 KAT6BQ8WYB5 2073 aa15.61■□□□□ 0.09
GRN-216ENST00000589923 RGPD2P0DJD1 1756 aa15.6■□□□□ 0.09
GRN-216ENST00000589923 ANKRD24Q8TF21 1146 aa15.6■□□□□ 0.09
GRN-216ENST00000589923 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
GRN-216ENST00000589923 NSD2O96028 1365 aa15.6■□□□□ 0.09
GRN-216ENST00000589923 KCNQ4P56696 695 aa15.58■□□□□ 0.08
GRN-216ENST00000589923 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
GRN-216ENST00000589923 A0A1W2PP64 1363 aa15.57■□□□□ 0.08
GRN-216ENST00000589923 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
GRN-216ENST00000589923 MEGF6O75095 1541 aa15.55■□□□□ 0.08
GRN-216ENST00000589923 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
GRN-216ENST00000589923 GPR162Q16538 588 aa15.54■□□□□ 0.08
GRN-216ENST00000589923 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
GRN-216ENST00000589923 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
GRN-216ENST00000589923 DDX54Q8TDD1 881 aaKnown RBP15.53■□□□□ 0.08
GRN-216ENST00000589923 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
GRN-216ENST00000589923 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.085e-6■■■□□ 19.1
GRN-216ENST00000589923 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
GRN-216ENST00000589923 IP6K1Q92551 441 aa15.52■□□□□ 0.08
GRN-216ENST00000589923 C5P01031 1676 aa15.51■□□□□ 0.07
GRN-216ENST00000589923 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms