RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.16■■□□□ 1.3
MBD3-206ENST00000589901 OVOS2A0A0G2JMS6 1433 aa23.15■■□□□ 1.3
MBD3-206ENST00000589901 OVOS2A0A0J9YW53 1432 aa23.15■■□□□ 1.3
MBD3-206ENST00000589901 OVOS2Q6IE36 1432 aa23.15■■□□□ 1.3
MBD3-206ENST00000589901 TONSLQ96HA7 1378 aa23.14■■□□□ 1.3
MBD3-206ENST00000589901 CSB-PGBD3P0DP91 1061 aa23.14■■□□□ 1.29
MBD3-206ENST00000589901 NFAT5O94916 1531 aa23.13■■□□□ 1.29
MBD3-206ENST00000589901 LRRC37A3O60309 1634 aa23.13■■□□□ 1.29
MBD3-206ENST00000589901 C11orf95C9JLR9 678 aaPredicted RBP23.13■■□□□ 1.29
MBD3-206ENST00000589901 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
MBD3-206ENST00000589901 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
MBD3-206ENST00000589901 NME9Q86XW9 330 aa23.12■■□□□ 1.29
MBD3-206ENST00000589901 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
MBD3-206ENST00000589901 PEAK1Q9H792 1746 aa23.11■■□□□ 1.29
MBD3-206ENST00000589901 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
MBD3-206ENST00000589901 RREB1Q92766 1687 aa23.1■■□□□ 1.29
MBD3-206ENST00000589901 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
MBD3-206ENST00000589901 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
MBD3-206ENST00000589901 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
MBD3-206ENST00000589901 CDCA7Q9BWT1 371 aaPredicted RBP23.1■■□□□ 1.29
MBD3-206ENST00000589901 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
MBD3-206ENST00000589901 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
MBD3-206ENST00000589901 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.29
MBD3-206ENST00000589901 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.29
MBD3-206ENST00000589901 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
MBD3-206ENST00000589901 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
MBD3-206ENST00000589901 PLSCR1O15162 318 aa23.05■■□□□ 1.28
MBD3-206ENST00000589901 A0A1W2PP64 1363 aa23.04■■□□□ 1.28
MBD3-206ENST00000589901 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
MBD3-206ENST00000589901 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
MBD3-206ENST00000589901 EDC4Q6P2E9 1401 aaKnown RBP23.03■■□□□ 1.28
MBD3-206ENST00000589901 EXOC5O00471 708 aa23.03■■□□□ 1.28
MBD3-206ENST00000589901 TERF2IPQ9NYB0 399 aa23.03■■□□□ 1.28
MBD3-206ENST00000589901 ABCC6O95255 1503 aa23.03■■□□□ 1.28
MBD3-206ENST00000589901 BCL9O00512 1426 aa23.02■■□□□ 1.28
MBD3-206ENST00000589901 PUS7Q96PZ0 661 aaKnown RBP23.02■■□□□ 1.28
MBD3-206ENST00000589901 TESK2Q96S53 571 aa23.02■■□□□ 1.28
MBD3-206ENST00000589901 ERBB3P21860 1342 aa23.02■■□□□ 1.28
MBD3-206ENST00000589901 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
MBD3-206ENST00000589901 NLRP2Q9NX02 1062 aa23.01■■□□□ 1.27
MBD3-206ENST00000589901 PROM2Q8N271 834 aa23■■□□□ 1.27
MBD3-206ENST00000589901 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
MBD3-206ENST00000589901 SBF2Q86WG5 1849 aa23■■□□□ 1.27
MBD3-206ENST00000589901 USP54Q70EL1 1684 aa23■■□□□ 1.27
MBD3-206ENST00000589901 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
MBD3-206ENST00000589901 TNS2Q63HR2 1409 aa22.98■■□□□ 1.27
MBD3-206ENST00000589901 KCNQ2O43526 872 aa22.96■■□□□ 1.27
MBD3-206ENST00000589901 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
MBD3-206ENST00000589901 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
MBD3-206ENST00000589901 SPON1Q9HCB6 807 aa22.95■■□□□ 1.26
MBD3-206ENST00000589901 IL2RBP14784 551 aa22.94■■□□□ 1.26
MBD3-206ENST00000589901 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
MBD3-206ENST00000589901 TXNRD1Q16881 649 aa22.93■■□□□ 1.26
MBD3-206ENST00000589901 ACSBG1Q96GR2 724 aa22.93■■□□□ 1.26
MBD3-206ENST00000589901 LTN1O94822 1766 aa22.93■■□□□ 1.26
MBD3-206ENST00000589901 NINLQ9Y2I6 1382 aa22.92■■□□□ 1.26
MBD3-206ENST00000589901 IP6K1Q92551 441 aa22.92■■□□□ 1.26
MBD3-206ENST00000589901 PDGFDQ9GZP0 370 aaPredicted RBP22.92■■□□□ 1.26
MBD3-206ENST00000589901 PPP1R1BQ9UD71 204 aaPredicted RBP22.91■■□□□ 1.26
MBD3-206ENST00000589901 FBLN1P23142 703 aa22.9■■□□□ 1.26
MBD3-206ENST00000589901 LTV1Q96GA3 475 aaPredicted RBP22.9■■□□□ 1.26
MBD3-206ENST00000589901 COG3Q96JB2 828 aa22.9■■□□□ 1.26
MBD3-206ENST00000589901 SLC24A1O60721 1099 aa22.89■■□□□ 1.25
MBD3-206ENST00000589901 MAP3K19Q56UN5 1328 aa22.87■■□□□ 1.25
MBD3-206ENST00000589901 STK32BQ9NY57 414 aa22.86■■□□□ 1.25
MBD3-206ENST00000589901 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
MBD3-206ENST00000589901 USP47Q96K76 1375 aa22.86■■□□□ 1.25
MBD3-206ENST00000589901 ZBTB7AO95365 584 aa22.85■■□□□ 1.25
MBD3-206ENST00000589901 HOXC9P31274 260 aa22.85■■□□□ 1.25
MBD3-206ENST00000589901 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
MBD3-206ENST00000589901 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
MBD3-206ENST00000589901 TMF1P82094 1093 aa22.84■■□□□ 1.25
MBD3-206ENST00000589901 CASZ1Q86V15 1759 aa22.84■■□□□ 1.25
MBD3-206ENST00000589901 AMPHP49418 695 aa22.83■■□□□ 1.25
MBD3-206ENST00000589901 DDX54Q8TDD1 881 aaKnown RBP22.83■■□□□ 1.25
MBD3-206ENST00000589901 GGNBP2Q9H3C7 697 aa22.82■■□□□ 1.24
MBD3-206ENST00000589901 ATF5Q9Y2D1 282 aaPredicted RBP22.82■■□□□ 1.24
MBD3-206ENST00000589901 FYB1O15117 783 aa22.81■■□□□ 1.24
MBD3-206ENST00000589901 PTGER2P43116 358 aa22.8■■□□□ 1.24
MBD3-206ENST00000589901 RRS1Q15050 365 aaKnown RBP22.8■■□□□ 1.24
MBD3-206ENST00000589901 LRRC4BQ9NT99 713 aa22.77■■□□□ 1.24
MBD3-206ENST00000589901 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
MBD3-206ENST00000589901 ZNF827Q17R98 1081 aa22.75■■□□□ 1.23
MBD3-206ENST00000589901 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
MBD3-206ENST00000589901 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
MBD3-206ENST00000589901 BTAF1O14981 1849 aa22.75■■□□□ 1.23
MBD3-206ENST00000589901 RTL1A6NKG5 1358 aa22.75■■□□□ 1.23
MBD3-206ENST00000589901 MEGF6O75095 1541 aa22.74■■□□□ 1.23
MBD3-206ENST00000589901 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
MBD3-206ENST00000589901 USHBP1Q8N6Y0 703 aa22.74■■□□□ 1.23
MBD3-206ENST00000589901 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
MBD3-206ENST00000589901 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
MBD3-206ENST00000589901 MTFR1LQ9H019 292 aa22.74■■□□□ 1.23
MBD3-206ENST00000589901 PAPPAQ13219 1627 aa22.73■■□□□ 1.23
MBD3-206ENST00000589901 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
MBD3-206ENST00000589901 YY1P25490 414 aa22.72■■□□□ 1.23
MBD3-206ENST00000589901 MYOM1P52179 1685 aa22.71■■□□□ 1.23
MBD3-206ENST00000589901 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
MBD3-206ENST00000589901 SGIP1Q9BQI5 828 aa22.71■■□□□ 1.23
MBD3-206ENST00000589901 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms