RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 USP21Q9UK80 565 aa14.56□□□□□ -0.08
SDF2-208ENST00000589788 SOCS7O14512 581 aa14.55□□□□□ -0.08
SDF2-208ENST00000589788 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
SDF2-208ENST00000589788 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
SDF2-208ENST00000589788 RXRBP28702 533 aa14.54□□□□□ -0.08
SDF2-208ENST00000589788 FNBP4Q8N3X1 1017 aaPredicted RBP14.54□□□□□ -0.08
SDF2-208ENST00000589788 ABTB2Q8N961 1025 aa14.54□□□□□ -0.08
SDF2-208ENST00000589788 BRD4O60885 1362 aaPredicted RBP14.54□□□□□ -0.08
SDF2-208ENST00000589788 USP6P35125 1406 aa14.53□□□□□ -0.08
SDF2-208ENST00000589788 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
SDF2-208ENST00000589788 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
SDF2-208ENST00000589788 TESK2Q96S53 571 aa14.53□□□□□ -0.08
SDF2-208ENST00000589788 AKAP12Q02952 1782 aa14.52□□□□□ -0.08
SDF2-208ENST00000589788 TRPC5Q9UL62 973 aaPredicted RBP14.52□□□□□ -0.08
SDF2-208ENST00000589788 TMF1P82094 1093 aa14.51□□□□□ -0.09
SDF2-208ENST00000589788 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
SDF2-208ENST00000589788 CRYBG1Q9Y4K1 1723 aa14.51□□□□□ -0.09
SDF2-208ENST00000589788 RBM6P78332 1123 aaKnown RBP14.5□□□□□ -0.09
SDF2-208ENST00000589788 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
SDF2-208ENST00000589788 PCDHB8Q9UN66 801 aa14.5□□□□□ -0.09
SDF2-208ENST00000589788 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
SDF2-208ENST00000589788 KTN1Q86UP2 1357 aaKnown RBP14.5□□□□□ -0.09
SDF2-208ENST00000589788 BCL9LQ86UU0 1499 aa14.5□□□□□ -0.09
SDF2-208ENST00000589788 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
SDF2-208ENST00000589788 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
SDF2-208ENST00000589788 SLIT2O94813 1529 aa14.49□□□□□ -0.09
SDF2-208ENST00000589788 PHRF1Q9P1Y6 1649 aaKnown RBP14.49□□□□□ -0.09
SDF2-208ENST00000589788 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
SDF2-208ENST00000589788 NWD2Q9ULI1 1742 aa14.49□□□□□ -0.09
SDF2-208ENST00000589788 FAM83GA6ND36 823 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 NLRP6P59044 892 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
SDF2-208ENST00000589788 UNC5CLQ8IV45 518 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 ATRNO75882 1429 aa14.48□□□□□ -0.09
SDF2-208ENST00000589788 CPSF1Q10570 1443 aaKnown RBP14.48□□□□□ -0.09
SDF2-208ENST00000589788 COL14A1Q05707 1796 aaKnown RBP14.48□□□□□ -0.09
SDF2-208ENST00000589788 MON2Q7Z3U7 1717 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
SDF2-208ENST00000589788 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 NINLQ9Y2I6 1382 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 TTC21BQ7Z4L5 1316 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 TTC21AQ8NDW8 1320 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
SDF2-208ENST00000589788 USP19O94966 1318 aa14.46□□□□□ -0.09
SDF2-208ENST00000589788 ZC3H6P61129 1189 aaKnown RBP14.46□□□□□ -0.09
SDF2-208ENST00000589788 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
SDF2-208ENST00000589788 PIK3C2AO00443 1686 aa14.46□□□□□ -0.09
SDF2-208ENST00000589788 NRKQ7Z2Y5 1582 aa14.46□□□□□ -0.09
SDF2-208ENST00000589788 KIAA0232Q92628 1395 aa14.46□□□□□ -0.1
SDF2-208ENST00000589788 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.1
SDF2-208ENST00000589788 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
SDF2-208ENST00000589788 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
SDF2-208ENST00000589788 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
SDF2-208ENST00000589788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
SDF2-208ENST00000589788 GJD4Q96KN9 370 aaPredicted RBP14.44□□□□□ -0.1
SDF2-208ENST00000589788 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
SDF2-208ENST00000589788 GCP02774 474 aa14.43□□□□□ -0.1
SDF2-208ENST00000589788 CHRNA2Q15822 529 aa14.43□□□□□ -0.1
SDF2-208ENST00000589788 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
SDF2-208ENST00000589788 VPS72Q15906 364 aa14.42□□□□□ -0.1
SDF2-208ENST00000589788 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
SDF2-208ENST00000589788 RGS12O14924 1447 aa14.42□□□□□ -0.1
SDF2-208ENST00000589788 CPDO75976 1380 aa14.42□□□□□ -0.1
SDF2-208ENST00000589788 SLIT3O75094 1523 aa14.42□□□□□ -0.1
SDF2-208ENST00000589788 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
SDF2-208ENST00000589788 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
SDF2-208ENST00000589788 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
SDF2-208ENST00000589788 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
SDF2-208ENST00000589788 KCNH5Q8NCM2 988 aa14.41□□□□□ -0.1
SDF2-208ENST00000589788 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 SOX12O15370 315 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 MAP3K13O43283 966 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 GLI3P10071 1580 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 PSEN1P49768 467 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 EVA1CP58658 441 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 NME9Q86XW9 330 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
SDF2-208ENST00000589788 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
SDF2-208ENST00000589788 RYDENQ9NUL5 291 aaKnown RBP14.38□□□□□ -0.11
SDF2-208ENST00000589788 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
SDF2-208ENST00000589788 USP31Q70CQ4 1352 aa14.37□□□□□ -0.11
SDF2-208ENST00000589788 A0A0G2JS52 829 aa14.37□□□□□ -0.11
SDF2-208ENST00000589788 MYT1Q01538 1121 aa14.37□□□□□ -0.11
SDF2-208ENST00000589788 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
SDF2-208ENST00000589788 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
SDF2-208ENST00000589788 CAMTA1Q9Y6Y1 1673 aa14.36□□□□□ -0.11
SDF2-208ENST00000589788 ZEB1P37275 1124 aaPredicted RBP14.36□□□□□ -0.11
SDF2-208ENST00000589788 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
SDF2-208ENST00000589788 MYOM1P52179 1685 aa14.36□□□□□ -0.11
SDF2-208ENST00000589788 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
SDF2-208ENST00000589788 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
SDF2-208ENST00000589788 ARHGEF25Q86VW2 580 aa14.35□□□□□ -0.11
SDF2-208ENST00000589788 NFAT5O94916 1531 aa14.34□□□□□ -0.11
SDF2-208ENST00000589788 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
SDF2-208ENST00000589788 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
SDF2-208ENST00000589788 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
SDF2-208ENST00000589788 COG3Q96JB2 828 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms