RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
VPS25-203ENST00000589520 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
VPS25-203ENST00000589520 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
VPS25-203ENST00000589520 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
VPS25-203ENST00000589520 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
VPS25-203ENST00000589520 FLT4P35916 1363 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 FBLN1P23142 703 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
VPS25-203ENST00000589520 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
VPS25-203ENST00000589520 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 FMN2Q9NZ56 1722 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
VPS25-203ENST00000589520 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
VPS25-203ENST00000589520 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
VPS25-203ENST00000589520 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
VPS25-203ENST00000589520 HMOX1P09601 288 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 AMPHP49418 695 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 NLRP6P59044 892 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
VPS25-203ENST00000589520 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
VPS25-203ENST00000589520 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
VPS25-203ENST00000589520 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
VPS25-203ENST00000589520 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
VPS25-203ENST00000589520 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
VPS25-203ENST00000589520 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
VPS25-203ENST00000589520 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
VPS25-203ENST00000589520 PSME1Q06323 249 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
VPS25-203ENST00000589520 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 KIF16BQ96L93 1317 aa13.33□□□□□ -0.28
VPS25-203ENST00000589520 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
VPS25-203ENST00000589520 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
VPS25-203ENST00000589520 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
VPS25-203ENST00000589520 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
VPS25-203ENST00000589520 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
VPS25-203ENST00000589520 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
VPS25-203ENST00000589520 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
VPS25-203ENST00000589520 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
VPS25-203ENST00000589520 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
VPS25-203ENST00000589520 KDRP35968 1356 aa13.31□□□□□ -0.28
VPS25-203ENST00000589520 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
VPS25-203ENST00000589520 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
VPS25-203ENST00000589520 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
VPS25-203ENST00000589520 HOXC9P31274 260 aa13.29□□□□□ -0.28
VPS25-203ENST00000589520 ATF7IPQ6VMQ6 1270 aa13.29□□□□□ -0.28
VPS25-203ENST00000589520 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
VPS25-203ENST00000589520 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
VPS25-203ENST00000589520 DDX19BQ9UMR2 479 aa13.29□□□□□ -0.28
VPS25-203ENST00000589520 DCCP43146 1447 aa13.29□□□□□ -0.28
VPS25-203ENST00000589520 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
VPS25-203ENST00000589520 IP6K1Q92551 441 aa13.28□□□□□ -0.28
VPS25-203ENST00000589520 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
VPS25-203ENST00000589520 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
VPS25-203ENST00000589520 VAMP4O75379 141 aa13.27□□□□□ -0.29
VPS25-203ENST00000589520 ATF3P18847 181 aa13.27□□□□□ -0.29
VPS25-203ENST00000589520 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
VPS25-203ENST00000589520 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
VPS25-203ENST00000589520 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.29
VPS25-203ENST00000589520 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
VPS25-203ENST00000589520 RGPD8O14715 1765 aaPredicted RBP13.27□□□□□ -0.29
VPS25-203ENST00000589520 CHL1O00533 1208 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 MST1RQ04912 1400 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 EYA1Q99502 592 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
VPS25-203ENST00000589520 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
VPS25-203ENST00000589520 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
VPS25-203ENST00000589520 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
VPS25-203ENST00000589520 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
VPS25-203ENST00000589520 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
VPS25-203ENST00000589520 SOX12O15370 315 aa13.24□□□□□ -0.29
VPS25-203ENST00000589520 TRIM27P14373 513 aa13.24□□□□□ -0.29
VPS25-203ENST00000589520 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
VPS25-203ENST00000589520 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
VPS25-203ENST00000589520 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
VPS25-203ENST00000589520 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
VPS25-203ENST00000589520 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
VPS25-203ENST00000589520 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
VPS25-203ENST00000589520 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
VPS25-203ENST00000589520 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
VPS25-203ENST00000589520 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
VPS25-203ENST00000589520 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
VPS25-203ENST00000589520 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
VPS25-203ENST00000589520 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
VPS25-203ENST00000589520 FOXO3O43524 673 aa13.21□□□□□ -0.29
VPS25-203ENST00000589520 GCP02774 474 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 421.4 ms