RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
DNMT1-217ENST00000589091 LRP5O75197 1615 aa20.67■□□□□ 0.9
DNMT1-217ENST00000589091 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-217ENST00000589091 ARHGEF25Q86VW2 580 aa20.67■□□□□ 0.9
DNMT1-217ENST00000589091 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
DNMT1-217ENST00000589091 EDC4Q6P2E9 1401 aaKnown RBP20.67■□□□□ 0.9
DNMT1-217ENST00000589091 RGPD3A6NKT7 1758 aaPredicted RBP20.67■□□□□ 0.9
DNMT1-217ENST00000589091 RGPD4Q7Z3J3 1758 aa20.67■□□□□ 0.9
DNMT1-217ENST00000589091 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
DNMT1-217ENST00000589091 WDR17Q8IZU2 1322 aa20.66■□□□□ 0.9
DNMT1-217ENST00000589091 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
DNMT1-217ENST00000589091 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
DNMT1-217ENST00000589091 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
DNMT1-217ENST00000589091 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.9
DNMT1-217ENST00000589091 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.89
DNMT1-217ENST00000589091 EN1Q05925 392 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-217ENST00000589091 FAM208AQ9UK61 1670 aaKnown RBP20.64■□□□□ 0.89
DNMT1-217ENST00000589091 TRIM37O94972 964 aa20.63■□□□□ 0.89
DNMT1-217ENST00000589091 SOX12O15370 315 aa20.62■□□□□ 0.89
DNMT1-217ENST00000589091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
DNMT1-217ENST00000589091 CDCA7Q9BWT1 371 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-217ENST00000589091 AXIN2Q9Y2T1 843 aa20.62■□□□□ 0.89
DNMT1-217ENST00000589091 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 A0A1W2PP64 1363 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
DNMT1-217ENST00000589091 TESK2Q96S53 571 aa20.6■□□□□ 0.89
DNMT1-217ENST00000589091 KAT6BQ8WYB5 2073 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 DDB1Q16531 1140 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 NME9Q86XW9 330 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 KIF20BQ96Q89 1820 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
DNMT1-217ENST00000589091 APBA3O96018 575 aa20.58■□□□□ 0.89
DNMT1-217ENST00000589091 CARD10Q9BWT7 1032 aa20.58■□□□□ 0.89
DNMT1-217ENST00000589091 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
DNMT1-217ENST00000589091 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
DNMT1-217ENST00000589091 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
DNMT1-217ENST00000589091 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
DNMT1-217ENST00000589091 USP47Q96K76 1375 aa20.56■□□□□ 0.88
DNMT1-217ENST00000589091 BCL9O00512 1426 aa20.53■□□□□ 0.88
DNMT1-217ENST00000589091 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-217ENST00000589091 TMF1P82094 1093 aa20.53■□□□□ 0.88
DNMT1-217ENST00000589091 ERBB3P21860 1342 aa20.53■□□□□ 0.88
DNMT1-217ENST00000589091 RGPD2P0DJD1 1756 aa20.52■□□□□ 0.88
DNMT1-217ENST00000589091 ANKRD36BQ8N2N9 1353 aa20.52■□□□□ 0.88
DNMT1-217ENST00000589091 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
DNMT1-217ENST00000589091 MYOM1P52179 1685 aa20.51■□□□□ 0.87
DNMT1-217ENST00000589091 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
DNMT1-217ENST00000589091 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
DNMT1-217ENST00000589091 EXOC5O00471 708 aa20.49■□□□□ 0.87
DNMT1-217ENST00000589091 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
DNMT1-217ENST00000589091 COG3Q96JB2 828 aa20.49■□□□□ 0.87
DNMT1-217ENST00000589091 NBPF14Q5TI25 921 aa20.48■□□□□ 0.87
DNMT1-217ENST00000589091 MARCH10Q8NA82 808 aaPredicted RBP20.47■□□□□ 0.87
DNMT1-217ENST00000589091 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
DNMT1-217ENST00000589091 PLSCR1O15162 318 aa20.46■□□□□ 0.87
DNMT1-217ENST00000589091 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
DNMT1-217ENST00000589091 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
DNMT1-217ENST00000589091 IP6K1Q92551 441 aa20.45■□□□□ 0.86
DNMT1-217ENST00000589091 BTAF1O14981 1849 aa20.45■□□□□ 0.86
DNMT1-217ENST00000589091 IL2RBP14784 551 aa20.44■□□□□ 0.86
DNMT1-217ENST00000589091 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
DNMT1-217ENST00000589091 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
DNMT1-217ENST00000589091 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
DNMT1-217ENST00000589091 MAP2P11137 1827 aaKnown RBP20.41■□□□□ 0.86
DNMT1-217ENST00000589091 MAP3K19Q56UN5 1328 aa20.4■□□□□ 0.86
DNMT1-217ENST00000589091 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
DNMT1-217ENST00000589091 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
DNMT1-217ENST00000589091 SRCAPQ6ZRS2 3230 aa20.4■□□□□ 0.86
DNMT1-217ENST00000589091 AMPHP49418 695 aa20.39■□□□□ 0.85
DNMT1-217ENST00000589091 FYB1O15117 783 aa20.38■□□□□ 0.85
DNMT1-217ENST00000589091 HOXC9P31274 260 aa20.38■□□□□ 0.85
DNMT1-217ENST00000589091 DOT1LQ8TEK3 1739 aa20.37■□□□□ 0.85
DNMT1-217ENST00000589091 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
DNMT1-217ENST00000589091 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
DNMT1-217ENST00000589091 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
DNMT1-217ENST00000589091 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
DNMT1-217ENST00000589091 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
DNMT1-217ENST00000589091 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
DNMT1-217ENST00000589091 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.84
DNMT1-217ENST00000589091 LY75O60449 1722 aa20.32■□□□□ 0.84
DNMT1-217ENST00000589091 FBLN1P23142 703 aa20.31■□□□□ 0.84
DNMT1-217ENST00000589091 RRS1Q15050 365 aaKnown RBP20.31■□□□□ 0.84
DNMT1-217ENST00000589091 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
DNMT1-217ENST00000589091 FLT4P35916 1363 aa20.31■□□□□ 0.84
DNMT1-217ENST00000589091 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
DNMT1-217ENST00000589091 KCNQ2O43526 872 aa20.3■□□□□ 0.84
DNMT1-217ENST00000589091 PROM2Q8N271 834 aa20.3■□□□□ 0.84
DNMT1-217ENST00000589091 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
DNMT1-217ENST00000589091 INSRP06213 1382 aa20.3■□□□□ 0.84
DNMT1-217ENST00000589091 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-217ENST00000589091 SPON1Q9HCB6 807 aa20.29■□□□□ 0.84
DNMT1-217ENST00000589091 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
DNMT1-217ENST00000589091 MEGF6O75095 1541 aa20.28■□□□□ 0.84
DNMT1-217ENST00000589091 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-217ENST00000589091 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
DNMT1-217ENST00000589091 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms