RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 NGEFQ8N5V2 710 aa11.53□□□□□ -0.56
SMAD4-206ENST00000588860 COG3Q96JB2 828 aa11.53□□□□□ -0.56
SMAD4-206ENST00000588860 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
SMAD4-206ENST00000588860 DLG5Q8TDM6 1919 aa11.52□□□□□ -0.56
SMAD4-206ENST00000588860 USP54Q70EL1 1684 aa11.52□□□□□ -0.56
SMAD4-206ENST00000588860 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.57
SMAD4-206ENST00000588860 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
SMAD4-206ENST00000588860 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
SMAD4-206ENST00000588860 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
SMAD4-206ENST00000588860 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 SRCAPQ6ZRS2 3230 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
SMAD4-206ENST00000588860 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
SMAD4-206ENST00000588860 PEAK1Q9H792 1746 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 AATKQ6ZMQ8 1374 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 OVOS2A0A0J9YW53 1432 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 OVOS2Q6IE36 1432 aa11.51□□□□□ -0.57
SMAD4-206ENST00000588860 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
SMAD4-206ENST00000588860 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
SMAD4-206ENST00000588860 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
SMAD4-206ENST00000588860 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
SMAD4-206ENST00000588860 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
SMAD4-206ENST00000588860 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
SMAD4-206ENST00000588860 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
SMAD4-206ENST00000588860 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
SMAD4-206ENST00000588860 FBLN1P23142 703 aa11.49□□□□□ -0.57
SMAD4-206ENST00000588860 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
SMAD4-206ENST00000588860 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
SMAD4-206ENST00000588860 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
SMAD4-206ENST00000588860 E9PSI1 815 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 TTC21AQ8NDW8 1320 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 MAPK8IP3Q9UPT6 1336 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 LTN1O94822 1766 aa11.48□□□□□ -0.57
SMAD4-206ENST00000588860 WWC1Q8IX03 1113 aa11.47□□□□□ -0.57
SMAD4-206ENST00000588860 TRMT2AQ8IZ69 625 aaKnown RBP11.47□□□□□ -0.57
SMAD4-206ENST00000588860 PNNQ9H307 717 aaKnown RBP11.47□□□□□ -0.57
SMAD4-206ENST00000588860 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
SMAD4-206ENST00000588860 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.57
SMAD4-206ENST00000588860 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
SMAD4-206ENST00000588860 KIF1AQ12756 1690 aa11.46□□□□□ -0.58
SMAD4-206ENST00000588860 CCDC27Q2M243 656 aa11.45□□□□□ -0.58
SMAD4-206ENST00000588860 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
SMAD4-206ENST00000588860 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
SMAD4-206ENST00000588860 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
SMAD4-206ENST00000588860 B4GALNT3Q6L9W6 998 aa11.44□□□□□ -0.58
SMAD4-206ENST00000588860 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
SMAD4-206ENST00000588860 IL13P35225 146 aa11.43□□□□□ -0.58
SMAD4-206ENST00000588860 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
SMAD4-206ENST00000588860 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
SMAD4-206ENST00000588860 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
SMAD4-206ENST00000588860 SOX12O15370 315 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 PLIN1O60240 522 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 FCHSD2O94868 740 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 NEFMP07197 916 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 PRKAR2BP31323 418 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
SMAD4-206ENST00000588860 TRPM3Q9HCF6 1732 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-206ENST00000588860 HMOX1P09601 288 aa11.41□□□□□ -0.58
SMAD4-206ENST00000588860 ZNF772Q68DY9 489 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-206ENST00000588860 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-206ENST00000588860 EXOC6Q8TAG9 804 aa11.41□□□□□ -0.58
SMAD4-206ENST00000588860 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-206ENST00000588860 RIPK4P57078 832 aa11.4□□□□□ -0.58
SMAD4-206ENST00000588860 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-206ENST00000588860 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
SMAD4-206ENST00000588860 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
SMAD4-206ENST00000588860 RXRBP28702 533 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 NLRP6P59044 892 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 EIF4A2Q14240 407 aaKnown RBP11.39□□□□□ -0.59
SMAD4-206ENST00000588860 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 CRBNQ96SW2 442 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 SBNO1A3KN83 1393 aa11.39□□□□□ -0.59
SMAD4-206ENST00000588860 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
SMAD4-206ENST00000588860 NFE2L2Q16236 605 aa11.38□□□□□ -0.59
SMAD4-206ENST00000588860 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
SMAD4-206ENST00000588860 RGPD2P0DJD1 1756 aa11.38□□□□□ -0.59
SMAD4-206ENST00000588860 FLT4P35916 1363 aa11.38□□□□□ -0.59
SMAD4-206ENST00000588860 NFAT5O94916 1531 aa11.37□□□□□ -0.59
SMAD4-206ENST00000588860 PSME1Q06323 249 aa11.37□□□□□ -0.59
SMAD4-206ENST00000588860 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
SMAD4-206ENST00000588860 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
SMAD4-206ENST00000588860 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
SMAD4-206ENST00000588860 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
SMAD4-206ENST00000588860 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 IL16Q14005 1332 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 BCAR3O75815 825 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 AMPHP49418 695 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 C20orf194Q5TEA3 1177 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 ARHGEF10O15013 1369 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 JCADQ9P266 1359 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
SMAD4-206ENST00000588860 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms