RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
ERCC1-205ENST00000587888 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
ERCC1-205ENST00000587888 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
ERCC1-205ENST00000587888 OVOS2A0A0J9YW53 1432 aa20.14■□□□□ 0.81
ERCC1-205ENST00000587888 OVOS2Q6IE36 1432 aa20.14■□□□□ 0.81
ERCC1-205ENST00000587888 PTF1AQ7RTS3 328 aa20.14■□□□□ 0.81
ERCC1-205ENST00000587888 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
ERCC1-205ENST00000587888 TMC1Q8TDI8 760 aa20.14■□□□□ 0.81
ERCC1-205ENST00000587888 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
ERCC1-205ENST00000587888 CARD10Q9BWT7 1032 aa20.13■□□□□ 0.81
ERCC1-205ENST00000587888 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
ERCC1-205ENST00000587888 RREB1Q92766 1687 aa20.13■□□□□ 0.81
ERCC1-205ENST00000587888 CDCA7Q9BWT1 371 aaPredicted RBP20.12■□□□□ 0.81
ERCC1-205ENST00000587888 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
ERCC1-205ENST00000587888 EXOC5O00471 708 aa20.11■□□□□ 0.81
ERCC1-205ENST00000587888 PLSCR1O15162 318 aa20.11■□□□□ 0.81
ERCC1-205ENST00000587888 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
ERCC1-205ENST00000587888 LRRC37A3O60309 1634 aa20.1■□□□□ 0.81
ERCC1-205ENST00000587888 NME9Q86XW9 330 aa20.1■□□□□ 0.81
ERCC1-205ENST00000587888 SLC12A5Q9H2X9 1139 aa20.1■□□□□ 0.81
ERCC1-205ENST00000587888 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
ERCC1-205ENST00000587888 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.81
ERCC1-205ENST00000587888 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
ERCC1-205ENST00000587888 SPON1Q9HCB6 807 aa20.07■□□□□ 0.8
ERCC1-205ENST00000587888 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
ERCC1-205ENST00000587888 KCNQ2O43526 872 aa20.06■□□□□ 0.8
ERCC1-205ENST00000587888 NLRP2Q9NX02 1062 aa20.06■□□□□ 0.8
ERCC1-205ENST00000587888 NFAT5O94916 1531 aa20.06■□□□□ 0.8
ERCC1-205ENST00000587888 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
ERCC1-205ENST00000587888 PROM2Q8N271 834 aa20.05■□□□□ 0.8
ERCC1-205ENST00000587888 SBNO2Q9Y2G9 1366 aa20.05■□□□□ 0.8
ERCC1-205ENST00000587888 USP31Q70CQ4 1352 aa20.04■□□□□ 0.8
ERCC1-205ENST00000587888 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
ERCC1-205ENST00000587888 MON2Q7Z3U7 1717 aa20.03■□□□□ 0.8
ERCC1-205ENST00000587888 ANO8Q9HCE9 1232 aaPredicted RBP20.03■□□□□ 0.8
ERCC1-205ENST00000587888 TERF2IPQ9NYB0 399 aa20.03■□□□□ 0.8
ERCC1-205ENST00000587888 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
ERCC1-205ENST00000587888 CD163L1Q9NR16 1453 aa20.03■□□□□ 0.8
ERCC1-205ENST00000587888 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
ERCC1-205ENST00000587888 ACSBG1Q96GR2 724 aa20.01■□□□□ 0.79
ERCC1-205ENST00000587888 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
ERCC1-205ENST00000587888 TXNRD1Q16881 649 aa20■□□□□ 0.79
ERCC1-205ENST00000587888 BCL9O00512 1426 aa20■□□□□ 0.79
ERCC1-205ENST00000587888 ERBB3P21860 1342 aa20■□□□□ 0.79
ERCC1-205ENST00000587888 IL2RBP14784 551 aa19.99■□□□□ 0.79
ERCC1-205ENST00000587888 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
ERCC1-205ENST00000587888 STK32BQ9NY57 414 aa19.98■□□□□ 0.79
ERCC1-205ENST00000587888 EDC4Q6P2E9 1401 aaKnown RBP19.98■□□□□ 0.79
ERCC1-205ENST00000587888 RGPD3A6NKT7 1758 aaPredicted RBP19.98■□□□□ 0.79
ERCC1-205ENST00000587888 RGPD4Q7Z3J3 1758 aa19.98■□□□□ 0.79
ERCC1-205ENST00000587888 A0A1W2PP64 1363 aa19.97■□□□□ 0.79
ERCC1-205ENST00000587888 ZBTB7AO95365 584 aa19.97■□□□□ 0.79
ERCC1-205ENST00000587888 LTV1Q96GA3 475 aaPredicted RBP19.97■□□□□ 0.79
ERCC1-205ENST00000587888 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
ERCC1-205ENST00000587888 LTN1O94822 1766 aa19.96■□□□□ 0.79
ERCC1-205ENST00000587888 ATF5Q9Y2D1 282 aaPredicted RBP19.96■□□□□ 0.79
ERCC1-205ENST00000587888 ABCC6O95255 1503 aa19.96■□□□□ 0.79
ERCC1-205ENST00000587888 TNS2Q63HR2 1409 aa19.95■□□□□ 0.78
ERCC1-205ENST00000587888 DCAF8L1A6NGE4 600 aa19.95■□□□□ 0.78
ERCC1-205ENST00000587888 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
ERCC1-205ENST00000587888 IP6K1Q92551 441 aa19.94■□□□□ 0.78
ERCC1-205ENST00000587888 TESK2Q96S53 571 aa19.94■□□□□ 0.78
ERCC1-205ENST00000587888 FBLN1P23142 703 aa19.93■□□□□ 0.78
ERCC1-205ENST00000587888 USP54Q70EL1 1684 aa19.93■□□□□ 0.78
ERCC1-205ENST00000587888 YY1P25490 414 aa19.92■□□□□ 0.78
ERCC1-205ENST00000587888 DDX54Q8TDD1 881 aaKnown RBP19.92■□□□□ 0.78
ERCC1-205ENST00000587888 COG3Q96JB2 828 aa19.92■□□□□ 0.78
ERCC1-205ENST00000587888 AMPHP49418 695 aa19.9■□□□□ 0.78
ERCC1-205ENST00000587888 NINLQ9Y2I6 1382 aa19.9■□□□□ 0.78
ERCC1-205ENST00000587888 CASZ1Q86V15 1759 aa19.9■□□□□ 0.78
ERCC1-205ENST00000587888 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
ERCC1-205ENST00000587888 PTGER2P43116 358 aa19.89■□□□□ 0.77
ERCC1-205ENST00000587888 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
ERCC1-205ENST00000587888 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
ERCC1-205ENST00000587888 NHSQ6T4R5 1651 aa19.87■□□□□ 0.77
ERCC1-205ENST00000587888 HOXC9P31274 260 aa19.87■□□□□ 0.77
ERCC1-205ENST00000587888 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
ERCC1-205ENST00000587888 TMF1P82094 1093 aa19.84■□□□□ 0.77
ERCC1-205ENST00000587888 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
ERCC1-205ENST00000587888 GGNBP2Q9H3C7 697 aa19.84■□□□□ 0.77
ERCC1-205ENST00000587888 LRRC4BQ9NT99 713 aa19.84■□□□□ 0.77
ERCC1-205ENST00000587888 BTAF1O14981 1849 aa19.83■□□□□ 0.77
ERCC1-205ENST00000587888 TRIM26Q12899 539 aaPredicted RBP19.83■□□□□ 0.77
ERCC1-205ENST00000587888 RRS1Q15050 365 aaKnown RBP19.83■□□□□ 0.77
ERCC1-205ENST00000587888 FYB1O15117 783 aa19.82■□□□□ 0.76
ERCC1-205ENST00000587888 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
ERCC1-205ENST00000587888 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
ERCC1-205ENST00000587888 FHDC1Q9C0D6 1143 aaPredicted RBP19.82■□□□□ 0.76
ERCC1-205ENST00000587888 MYOM1P52179 1685 aa19.81■□□□□ 0.76
ERCC1-205ENST00000587888 KCNQ4P56696 695 aa19.81■□□□□ 0.76
ERCC1-205ENST00000587888 ZCRB1Q8TBF4 217 aaKnown RBP19.81■□□□□ 0.76
ERCC1-205ENST00000587888 SYT17Q9BSW7 474 aa19.81■□□□□ 0.76
ERCC1-205ENST00000587888 ANKRD36BQ8N2N9 1353 aa19.81■□□□□ 0.76
ERCC1-205ENST00000587888 NBPF6Q5VWK0 638 aa19.79■□□□□ 0.76
ERCC1-205ENST00000587888 USHBP1Q8N6Y0 703 aa19.79■□□□□ 0.76
ERCC1-205ENST00000587888 NBPF4Q96M43 638 aa19.79■□□□□ 0.76
ERCC1-205ENST00000587888 SGIP1Q9BQI5 828 aa19.79■□□□□ 0.76
ERCC1-205ENST00000587888 USP47Q96K76 1375 aa19.79■□□□□ 0.76
ERCC1-205ENST00000587888 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
ERCC1-205ENST00000587888 SLC27A3Q5K4L6 730 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms