RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 CPSF1Q10570 1443 aaKnown RBP19.53■□□□□ 0.72
RDH13-209ENST00000587721 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
RDH13-209ENST00000587721 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
RDH13-209ENST00000587721 PIK3C2AO00443 1686 aa19.52■□□□□ 0.71
RDH13-209ENST00000587721 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
RDH13-209ENST00000587721 SBNO2Q9Y2G9 1366 aa19.51■□□□□ 0.71
RDH13-209ENST00000587721 PLSCR1O15162 318 aa19.5■□□□□ 0.71
RDH13-209ENST00000587721 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
RDH13-209ENST00000587721 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
RDH13-209ENST00000587721 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
RDH13-209ENST00000587721 EXOC5O00471 708 aa19.48■□□□□ 0.71
RDH13-209ENST00000587721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.48■□□□□ 0.71
RDH13-209ENST00000587721 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
RDH13-209ENST00000587721 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
RDH13-209ENST00000587721 RREB1Q92766 1687 aa19.46■□□□□ 0.71
RDH13-209ENST00000587721 SPON1Q9HCB6 807 aa19.46■□□□□ 0.71
RDH13-209ENST00000587721 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
RDH13-209ENST00000587721 COL18A1P39060 1754 aa19.46■□□□□ 0.71
RDH13-209ENST00000587721 AKAP12Q02952 1782 aa19.46■□□□□ 0.71
RDH13-209ENST00000587721 LRRC37A3O60309 1634 aa19.45■□□□□ 0.7
RDH13-209ENST00000587721 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
RDH13-209ENST00000587721 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
RDH13-209ENST00000587721 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
RDH13-209ENST00000587721 BCL9O00512 1426 aa19.44■□□□□ 0.7
RDH13-209ENST00000587721 ABCC6O95255 1503 aa19.44■□□□□ 0.7
RDH13-209ENST00000587721 NUP188Q5SRE5 1749 aa19.43■□□□□ 0.7
RDH13-209ENST00000587721 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
RDH13-209ENST00000587721 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
RDH13-209ENST00000587721 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
RDH13-209ENST00000587721 NFAT5O94916 1531 aa19.42■□□□□ 0.7
RDH13-209ENST00000587721 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
RDH13-209ENST00000587721 KCNQ2O43526 872 aa19.42■□□□□ 0.7
RDH13-209ENST00000587721 NME9Q86XW9 330 aa19.42■□□□□ 0.7
RDH13-209ENST00000587721 SLC12A5Q9H2X9 1139 aa19.41■□□□□ 0.7
RDH13-209ENST00000587721 NLRP2Q9NX02 1062 aa19.41■□□□□ 0.7
RDH13-209ENST00000587721 ERBB3P21860 1342 aa19.4■□□□□ 0.7
RDH13-209ENST00000587721 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.7
RDH13-209ENST00000587721 RGPD3A6NKT7 1758 aaPredicted RBP19.39■□□□□ 0.7
RDH13-209ENST00000587721 RGPD4Q7Z3J3 1758 aa19.39■□□□□ 0.7
RDH13-209ENST00000587721 EDC4Q6P2E9 1401 aaKnown RBP19.39■□□□□ 0.69
RDH13-209ENST00000587721 IL2RBP14784 551 aa19.38■□□□□ 0.69
RDH13-209ENST00000587721 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
RDH13-209ENST00000587721 PTF1AQ7RTS3 328 aa19.37■□□□□ 0.69
RDH13-209ENST00000587721 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
RDH13-209ENST00000587721 WNK3Q9BYP7 1800 aa19.37■□□□□ 0.69
RDH13-209ENST00000587721 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
RDH13-209ENST00000587721 TNS2Q63HR2 1409 aa19.36■□□□□ 0.69
RDH13-209ENST00000587721 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
RDH13-209ENST00000587721 ANKRD24Q8TF21 1146 aa19.36■□□□□ 0.69
RDH13-209ENST00000587721 SBF2Q86WG5 1849 aa19.35■□□□□ 0.69
RDH13-209ENST00000587721 RGPD5Q99666 1765 aa19.35■□□□□ 0.69
RDH13-209ENST00000587721 PROM2Q8N271 834 aa19.35■□□□□ 0.69
RDH13-209ENST00000587721 A0A1W2PP64 1363 aa19.34■□□□□ 0.69
RDH13-209ENST00000587721 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
RDH13-209ENST00000587721 USP54Q70EL1 1684 aa19.33■□□□□ 0.68
RDH13-209ENST00000587721 ST20-MTHFSA0A0A6YYL1 179 aa19.32■□□□□ 0.68
RDH13-209ENST00000587721 COG3Q96JB2 828 aa19.32■□□□□ 0.68
RDH13-209ENST00000587721 SLC15A2Q16348 729 aa19.31■□□□□ 0.68
RDH13-209ENST00000587721 IP6K1Q92551 441 aa19.31■□□□□ 0.68
RDH13-209ENST00000587721 ACSBG1Q96GR2 724 aa19.31■□□□□ 0.68
RDH13-209ENST00000587721 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
RDH13-209ENST00000587721 TESK2Q96S53 571 aa19.29■□□□□ 0.68
RDH13-209ENST00000587721 YY1P25490 414 aa19.28■□□□□ 0.68
RDH13-209ENST00000587721 AMPHP49418 695 aa19.28■□□□□ 0.68
RDH13-209ENST00000587721 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
RDH13-209ENST00000587721 LTN1O94822 1766 aa19.28■□□□□ 0.68
RDH13-209ENST00000587721 TMF1P82094 1093 aa19.26■□□□□ 0.67
RDH13-209ENST00000587721 DDX54Q8TDD1 881 aaKnown RBP19.26■□□□□ 0.67
RDH13-209ENST00000587721 MTFR1LQ9H019 292 aa19.26■□□□□ 0.67
RDH13-209ENST00000587721 PDGFDQ9GZP0 370 aaPredicted RBP19.25■□□□□ 0.67
RDH13-209ENST00000587721 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
RDH13-209ENST00000587721 NHSQ6T4R5 1651 aa19.24■□□□□ 0.67
RDH13-209ENST00000587721 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
RDH13-209ENST00000587721 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
RDH13-209ENST00000587721 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
RDH13-209ENST00000587721 HOXC9P31274 260 aa19.23■□□□□ 0.67
RDH13-209ENST00000587721 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
RDH13-209ENST00000587721 CASZ1Q86V15 1759 aa19.23■□□□□ 0.67
RDH13-209ENST00000587721 PTGER2P43116 358 aa19.22■□□□□ 0.67
RDH13-209ENST00000587721 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
RDH13-209ENST00000587721 SYTL4Q96C24 671 aaPredicted RBP19.2■□□□□ 0.66
RDH13-209ENST00000587721 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
RDH13-209ENST00000587721 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
RDH13-209ENST00000587721 ZCRB1Q8TBF4 217 aaKnown RBP19.19■□□□□ 0.66
RDH13-209ENST00000587721 USP47Q96K76 1375 aa19.19■□□□□ 0.66
RDH13-209ENST00000587721 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
RDH13-209ENST00000587721 FYB1O15117 783 aa19.17■□□□□ 0.66
RDH13-209ENST00000587721 SYT17Q9BSW7 474 aa19.17■□□□□ 0.66
RDH13-209ENST00000587721 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
RDH13-209ENST00000587721 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
RDH13-209ENST00000587721 CGNL1Q0VF96 1302 aa19.17■□□□□ 0.66
RDH13-209ENST00000587721 FBLN1P23142 703 aa19.16■□□□□ 0.66
RDH13-209ENST00000587721 PRIM1P49642 420 aaKnown RBP19.16■□□□□ 0.66
RDH13-209ENST00000587721 SLC16A10Q8TF71 515 aa19.16■□□□□ 0.66
RDH13-209ENST00000587721 RAPGEF4Q8WZA2 1011 aa19.16■□□□□ 0.66
RDH13-209ENST00000587721 ARXQ96QS3 562 aa19.16■□□□□ 0.66
RDH13-209ENST00000587721 RRS1Q15050 365 aaKnown RBP19.15■□□□□ 0.66
RDH13-209ENST00000587721 LRRC4BQ9NT99 713 aa19.15■□□□□ 0.66
RDH13-209ENST00000587721 BTAF1O14981 1849 aa19.15■□□□□ 0.66
RDH13-209ENST00000587721 HMGB2P26583 209 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms