RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 OVOS2Q6IE36 1432 aa24.15■■□□□ 1.46
SF3A2-203ENST00000587637 THRAP3Q9Y2W1 955 aaKnown RBP24.14■■□□□ 1.45
SF3A2-203ENST00000587637 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
SF3A2-203ENST00000587637 TOM1L2Q6ZVM7 507 aa24.13■■□□□ 1.45
SF3A2-203ENST00000587637 USP54Q70EL1 1684 aa24.13■■□□□ 1.45
SF3A2-203ENST00000587637 RGPD3A6NKT7 1758 aaPredicted RBP24.13■■□□□ 1.45
SF3A2-203ENST00000587637 LTN1O94822 1766 aa24.13■■□□□ 1.45
SF3A2-203ENST00000587637 RGPD4Q7Z3J3 1758 aa24.13■■□□□ 1.45
SF3A2-203ENST00000587637 CD163L1Q9NR16 1453 aa24.13■■□□□ 1.45
SF3A2-203ENST00000587637 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
SF3A2-203ENST00000587637 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
SF3A2-203ENST00000587637 ARHGEF25Q86VW2 580 aa24.09■■□□□ 1.45
SF3A2-203ENST00000587637 DDB1Q16531 1140 aa24.07■■□□□ 1.44
SF3A2-203ENST00000587637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.06■■□□□ 1.44
SF3A2-203ENST00000587637 MARCH10Q8NA82 808 aaPredicted RBP24.06■■□□□ 1.44
SF3A2-203ENST00000587637 ANO8Q9HCE9 1232 aaPredicted RBP24.06■■□□□ 1.44
SF3A2-203ENST00000587637 TTC21AQ8NDW8 1320 aa24.06■■□□□ 1.44
SF3A2-203ENST00000587637 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
SF3A2-203ENST00000587637 NME9Q86XW9 330 aa24.05■■□□□ 1.44
SF3A2-203ENST00000587637 SBNO2Q9Y2G9 1366 aa24.04■■□□□ 1.44
SF3A2-203ENST00000587637 CSB-PGBD3P0DP91 1061 aa24.04■■□□□ 1.44
SF3A2-203ENST00000587637 ABCC6O95255 1503 aa24.03■■□□□ 1.44
SF3A2-203ENST00000587637 CARD11Q9BXL7 1154 aa24.02■■□□□ 1.44
SF3A2-203ENST00000587637 TNS2Q63HR2 1409 aa24.01■■□□□ 1.43
SF3A2-203ENST00000587637 ZNF692Q9BU19 519 aaPredicted RBP24.01■■□□□ 1.43
SF3A2-203ENST00000587637 NHSQ6T4R5 1651 aa24■■□□□ 1.43
SF3A2-203ENST00000587637 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
SF3A2-203ENST00000587637 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
SF3A2-203ENST00000587637 CARD10Q9BWT7 1032 aa23.99■■□□□ 1.43
SF3A2-203ENST00000587637 A0A1W2PP64 1363 aa23.99■■□□□ 1.43
SF3A2-203ENST00000587637 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
SF3A2-203ENST00000587637 NBPF14Q5TI25 921 aa23.98■■□□□ 1.43
SF3A2-203ENST00000587637 PDGFDQ9GZP0 370 aaPredicted RBP23.98■■□□□ 1.43
SF3A2-203ENST00000587637 TONSLQ96HA7 1378 aa23.97■■□□□ 1.43
SF3A2-203ENST00000587637 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
SF3A2-203ENST00000587637 MYOM1P52179 1685 aa23.96■■□□□ 1.43
SF3A2-203ENST00000587637 BCL9O00512 1426 aa23.94■■□□□ 1.42
SF3A2-203ENST00000587637 EDC4Q6P2E9 1401 aaKnown RBP23.94■■□□□ 1.42
SF3A2-203ENST00000587637 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
SF3A2-203ENST00000587637 ERBB3P21860 1342 aa23.94■■□□□ 1.42
SF3A2-203ENST00000587637 PROM2Q8N271 834 aa23.94■■□□□ 1.42
SF3A2-203ENST00000587637 BCL11BQ9C0K0 894 aaPredicted RBP23.94■■□□□ 1.42
SF3A2-203ENST00000587637 BTAF1O14981 1849 aa23.94■■□□□ 1.42
SF3A2-203ENST00000587637 RGPD2P0DJD1 1756 aa23.93■■□□□ 1.42
SF3A2-203ENST00000587637 KCNQ2O43526 872 aa23.92■■□□□ 1.42
SF3A2-203ENST00000587637 CDCA7Q9BWT1 371 aaPredicted RBP23.91■■□□□ 1.42
SF3A2-203ENST00000587637 PAPPAQ13219 1627 aa23.91■■□□□ 1.42
SF3A2-203ENST00000587637 PLSCR1O15162 318 aa23.9■■□□□ 1.42
SF3A2-203ENST00000587637 ACSBG1Q96GR2 724 aa23.9■■□□□ 1.42
SF3A2-203ENST00000587637 NLRP2Q9NX02 1062 aa23.9■■□□□ 1.42
SF3A2-203ENST00000587637 KAT6BQ8WYB5 2073 aa23.9■■□□□ 1.42
SF3A2-203ENST00000587637 C11orf95C9JLR9 678 aaPredicted RBP23.89■■□□□ 1.41
SF3A2-203ENST00000587637 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
SF3A2-203ENST00000587637 ANKRD24Q8TF21 1146 aa23.88■■□□□ 1.41
SF3A2-203ENST00000587637 SPON1Q9HCB6 807 aa23.88■■□□□ 1.41
SF3A2-203ENST00000587637 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
SF3A2-203ENST00000587637 SHANK3Q9BYB0 1731 aa23.87■■□□□ 1.41
SF3A2-203ENST00000587637 EXOC5O00471 708 aa23.87■■□□□ 1.41
SF3A2-203ENST00000587637 PPP1R1BQ9UD71 204 aaPredicted RBP23.87■■□□□ 1.41
SF3A2-203ENST00000587637 ZBTB7AO95365 584 aa23.86■■□□□ 1.41
SF3A2-203ENST00000587637 TXNRD1Q16881 649 aa23.86■■□□□ 1.41
SF3A2-203ENST00000587637 TESK2Q96S53 571 aa23.86■■□□□ 1.41
SF3A2-203ENST00000587637 FBLN1P23142 703 aa23.85■■□□□ 1.41
SF3A2-203ENST00000587637 DOT1LQ8TEK3 1739 aa23.84■■□□□ 1.41
SF3A2-203ENST00000587637 LTV1Q96GA3 475 aaPredicted RBP23.84■■□□□ 1.41
SF3A2-203ENST00000587637 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
SF3A2-203ENST00000587637 IL2RBP14784 551 aa23.82■■□□□ 1.4
SF3A2-203ENST00000587637 NINLQ9Y2I6 1382 aa23.81■■□□□ 1.4
SF3A2-203ENST00000587637 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
SF3A2-203ENST00000587637 TUBGCP6Q96RT7 1819 aa23.81■■□□□ 1.4
SF3A2-203ENST00000587637 ATF5Q9Y2D1 282 aaPredicted RBP23.79■■□□□ 1.4
SF3A2-203ENST00000587637 KIF20BQ96Q89 1820 aa23.79■■□□□ 1.4
SF3A2-203ENST00000587637 STK32BQ9NY57 414 aa23.78■■□□□ 1.4
SF3A2-203ENST00000587637 MEGF6O75095 1541 aa23.78■■□□□ 1.4
SF3A2-203ENST00000587637 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
SF3A2-203ENST00000587637 PTGER2P43116 358 aa23.77■■□□□ 1.4
SF3A2-203ENST00000587637 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
SF3A2-203ENST00000587637 ZNF827Q17R98 1081 aa23.76■■□□□ 1.39
SF3A2-203ENST00000587637 IP6K1Q92551 441 aa23.75■■□□□ 1.39
SF3A2-203ENST00000587637 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
SF3A2-203ENST00000587637 USP47Q96K76 1375 aa23.74■■□□□ 1.39
SF3A2-203ENST00000587637 YY1P25490 414 aa23.73■■□□□ 1.39
SF3A2-203ENST00000587637 HOXC9P31274 260 aa23.73■■□□□ 1.39
SF3A2-203ENST00000587637 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
SF3A2-203ENST00000587637 COG3Q96JB2 828 aa23.72■■□□□ 1.39
SF3A2-203ENST00000587637 LRRC4BQ9NT99 713 aa23.72■■□□□ 1.39
SF3A2-203ENST00000587637 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
SF3A2-203ENST00000587637 PUS7Q96PZ0 661 aaKnown RBP23.71■■□□□ 1.39
SF3A2-203ENST00000587637 LY75O60449 1722 aa23.7■■□□□ 1.39
SF3A2-203ENST00000587637 NSD2O96028 1365 aa23.7■■□□□ 1.38
SF3A2-203ENST00000587637 KCNQ4P56696 695 aa23.7■■□□□ 1.38
SF3A2-203ENST00000587637 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
SF3A2-203ENST00000587637 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.38
SF3A2-203ENST00000587637 GGNBP2Q9H3C7 697 aa23.69■■□□□ 1.38
SF3A2-203ENST00000587637 UTRNP46939 3433 aa23.69■■□□□ 1.38
SF3A2-203ENST00000587637 AMPHP49418 695 aa23.68■■□□□ 1.38
SF3A2-203ENST00000587637 SGIP1Q9BQI5 828 aa23.68■■□□□ 1.38
SF3A2-203ENST00000587637 FHDC1Q9C0D6 1143 aaPredicted RBP23.67■■□□□ 1.38
SF3A2-203ENST00000587637 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
SF3A2-203ENST00000587637 MTFR1LQ9H019 292 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms