RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PROM2Q8N271 834 aa20.73■□□□□ 0.91
SDF2-202ENST00000585428 CARD10Q9BWT7 1032 aa20.73■□□□□ 0.91
SDF2-202ENST00000585428 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
SDF2-202ENST00000585428 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
SDF2-202ENST00000585428 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
SDF2-202ENST00000585428 KCNQ2O43526 872 aa20.71■□□□□ 0.91
SDF2-202ENST00000585428 SPON1Q9HCB6 807 aa20.71■□□□□ 0.91
SDF2-202ENST00000585428 COL18A1P39060 1754 aa20.71■□□□□ 0.91
SDF2-202ENST00000585428 RREB1Q92766 1687 aa20.7■□□□□ 0.91
SDF2-202ENST00000585428 BCL9O00512 1426 aa20.7■□□□□ 0.9
SDF2-202ENST00000585428 PEAK1Q9H792 1746 aa20.69■□□□□ 0.9
SDF2-202ENST00000585428 PIK3C2AO00443 1686 aa20.68■□□□□ 0.9
SDF2-202ENST00000585428 EXOC5O00471 708 aa20.68■□□□□ 0.9
SDF2-202ENST00000585428 SOX12O15370 315 aa20.68■□□□□ 0.9
SDF2-202ENST00000585428 NUP188Q5SRE5 1749 aa20.67■□□□□ 0.9
SDF2-202ENST00000585428 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
SDF2-202ENST00000585428 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
SDF2-202ENST00000585428 CSB-PGBD3P0DP91 1061 aa20.66■□□□□ 0.9
SDF2-202ENST00000585428 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
SDF2-202ENST00000585428 USP31Q70CQ4 1352 aa20.64■□□□□ 0.89
SDF2-202ENST00000585428 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.89
SDF2-202ENST00000585428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
SDF2-202ENST00000585428 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
SDF2-202ENST00000585428 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
SDF2-202ENST00000585428 PPP1R1BQ9UD71 204 aaPredicted RBP20.62■□□□□ 0.89
SDF2-202ENST00000585428 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
SDF2-202ENST00000585428 TXNRD1Q16881 649 aa20.61■□□□□ 0.89
SDF2-202ENST00000585428 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
SDF2-202ENST00000585428 NFAT5O94916 1531 aa20.61■□□□□ 0.89
SDF2-202ENST00000585428 NME9Q86XW9 330 aa20.6■□□□□ 0.89
SDF2-202ENST00000585428 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
SDF2-202ENST00000585428 CD163L1Q9NR16 1453 aa20.59■□□□□ 0.89
SDF2-202ENST00000585428 PUS7Q96PZ0 661 aaKnown RBP20.59■□□□□ 0.89
SDF2-202ENST00000585428 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
SDF2-202ENST00000585428 ERBB3P21860 1342 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 YY1P25490 414 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 SLC15A2Q16348 729 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 NLRP2Q9NX02 1062 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
SDF2-202ENST00000585428 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
SDF2-202ENST00000585428 PTGER2P43116 358 aa20.56■□□□□ 0.88
SDF2-202ENST00000585428 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
SDF2-202ENST00000585428 ABCC6O95255 1503 aa20.55■□□□□ 0.88
SDF2-202ENST00000585428 ZBTB7AO95365 584 aa20.55■□□□□ 0.88
SDF2-202ENST00000585428 IL2RBP14784 551 aa20.55■□□□□ 0.88
SDF2-202ENST00000585428 RGPD5Q99666 1765 aa20.54■□□□□ 0.88
SDF2-202ENST00000585428 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
SDF2-202ENST00000585428 ANKRD24Q8TF21 1146 aa20.54■□□□□ 0.88
SDF2-202ENST00000585428 STK32BQ9NY57 414 aa20.54■□□□□ 0.88
SDF2-202ENST00000585428 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
SDF2-202ENST00000585428 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
SDF2-202ENST00000585428 ACSBG1Q96GR2 724 aa20.52■□□□□ 0.88
SDF2-202ENST00000585428 ATF5Q9Y2D1 282 aaPredicted RBP20.52■□□□□ 0.88
SDF2-202ENST00000585428 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
SDF2-202ENST00000585428 IP6K1Q92551 441 aa20.51■□□□□ 0.87
SDF2-202ENST00000585428 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
SDF2-202ENST00000585428 WNK3Q9BYP7 1800 aa20.49■□□□□ 0.87
SDF2-202ENST00000585428 TESK2Q96S53 571 aa20.49■□□□□ 0.87
SDF2-202ENST00000585428 SGIP1Q9BQI5 828 aa20.49■□□□□ 0.87
SDF2-202ENST00000585428 MON2Q7Z3U7 1717 aa20.49■□□□□ 0.87
SDF2-202ENST00000585428 CASZ1Q86V15 1759 aa20.49■□□□□ 0.87
SDF2-202ENST00000585428 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
SDF2-202ENST00000585428 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
SDF2-202ENST00000585428 USP54Q70EL1 1684 aa20.46■□□□□ 0.87
SDF2-202ENST00000585428 SYT17Q9BSW7 474 aa20.46■□□□□ 0.87
SDF2-202ENST00000585428 LRRC4BQ9NT99 713 aa20.46■□□□□ 0.87
SDF2-202ENST00000585428 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SDF2-202ENST00000585428 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
SDF2-202ENST00000585428 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
SDF2-202ENST00000585428 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
SDF2-202ENST00000585428 FBLN1P23142 703 aa20.43■□□□□ 0.86
SDF2-202ENST00000585428 DDX54Q8TDD1 881 aaKnown RBP20.43■□□□□ 0.86
SDF2-202ENST00000585428 HOXC9P31274 260 aa20.41■□□□□ 0.86
SDF2-202ENST00000585428 ZNF827Q17R98 1081 aa20.41■□□□□ 0.86
SDF2-202ENST00000585428 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
SDF2-202ENST00000585428 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
SDF2-202ENST00000585428 COG3Q96JB2 828 aa20.41■□□□□ 0.86
SDF2-202ENST00000585428 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
SDF2-202ENST00000585428 NHSQ6T4R5 1651 aa20.4■□□□□ 0.86
SDF2-202ENST00000585428 SLC27A3Q5K4L6 730 aa20.39■□□□□ 0.85
SDF2-202ENST00000585428 ARXQ96QS3 562 aa20.39■□□□□ 0.85
SDF2-202ENST00000585428 AMPHP49418 695 aa20.37■□□□□ 0.85
SDF2-202ENST00000585428 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
SDF2-202ENST00000585428 LTN1O94822 1766 aa20.36■□□□□ 0.85
SDF2-202ENST00000585428 FYB1O15117 783 aa20.36■□□□□ 0.85
SDF2-202ENST00000585428 ZCRB1Q8TBF4 217 aaKnown RBP20.36■□□□□ 0.85
SDF2-202ENST00000585428 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
SDF2-202ENST00000585428 MYOM1P52179 1685 aa20.35■□□□□ 0.85
SDF2-202ENST00000585428 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
SDF2-202ENST00000585428 NBPF6Q5VWK0 638 aa20.34■□□□□ 0.85
SDF2-202ENST00000585428 NBPF4Q96M43 638 aa20.34■□□□□ 0.85
SDF2-202ENST00000585428 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
SDF2-202ENST00000585428 KCNQ4P56696 695 aa20.33■□□□□ 0.85
SDF2-202ENST00000585428 UTRNP46939 3433 aa20.33■□□□□ 0.84
SDF2-202ENST00000585428 ANKRD36BQ8N2N9 1353 aa20.33■□□□□ 0.84
SDF2-202ENST00000585428 ZNF784Q8NCA9 323 aaPredicted RBP20.32■□□□□ 0.84
SDF2-202ENST00000585428 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms