RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.93■□□□□ 0.62
PRKCSH-201ENST00000585325 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
PRKCSH-201ENST00000585325 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-201ENST00000585325 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
PRKCSH-201ENST00000585325 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
PRKCSH-201ENST00000585325 PPP1R1BQ9UD71 204 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-201ENST00000585325 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
PRKCSH-201ENST00000585325 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
PRKCSH-201ENST00000585325 AXIN2Q9Y2T1 843 aa18.91■□□□□ 0.62
PRKCSH-201ENST00000585325 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
PRKCSH-201ENST00000585325 SPON1Q9HCB6 807 aa18.9■□□□□ 0.62
PRKCSH-201ENST00000585325 RGPD5Q99666 1765 aa18.9■□□□□ 0.62
PRKCSH-201ENST00000585325 NFAT5O94916 1531 aa18.9■□□□□ 0.62
PRKCSH-201ENST00000585325 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
PRKCSH-201ENST00000585325 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.61
PRKCSH-201ENST00000585325 WDR17Q8IZU2 1322 aa18.89■□□□□ 0.61
PRKCSH-201ENST00000585325 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
PRKCSH-201ENST00000585325 CSB-PGBD3P0DP91 1061 aa18.88■□□□□ 0.61
PRKCSH-201ENST00000585325 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 KCNQ2O43526 872 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 LRRC37A3O60309 1634 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 USP54Q70EL1 1684 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 NME9Q86XW9 330 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 WNK3Q9BYP7 1800 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
PRKCSH-201ENST00000585325 EDC4Q6P2E9 1401 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-201ENST00000585325 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
PRKCSH-201ENST00000585325 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-201ENST00000585325 DDB1Q16531 1140 aa18.85■□□□□ 0.61
PRKCSH-201ENST00000585325 TESK2Q96S53 571 aa18.85■□□□□ 0.61
PRKCSH-201ENST00000585325 ABCC6O95255 1503 aa18.84■□□□□ 0.61
PRKCSH-201ENST00000585325 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.61
PRKCSH-201ENST00000585325 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.61
PRKCSH-201ENST00000585325 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.61
PRKCSH-201ENST00000585325 LTN1O94822 1766 aa18.83■□□□□ 0.61
PRKCSH-201ENST00000585325 C11orf95C9JLR9 678 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-201ENST00000585325 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
PRKCSH-201ENST00000585325 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-201ENST00000585325 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
PRKCSH-201ENST00000585325 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
PRKCSH-201ENST00000585325 USP47Q96K76 1375 aa18.8■□□□□ 0.6
PRKCSH-201ENST00000585325 CCDC7Q96M83 1385 aa18.8■□□□□ 0.6
PRKCSH-201ENST00000585325 SBF2Q86WG5 1849 aa18.78■□□□□ 0.6
PRKCSH-201ENST00000585325 TMF1P82094 1093 aa18.77■□□□□ 0.6
PRKCSH-201ENST00000585325 ZNF784Q8NCA9 323 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-201ENST00000585325 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
PRKCSH-201ENST00000585325 ERBB3P21860 1342 aa18.76■□□□□ 0.59
PRKCSH-201ENST00000585325 MARCH10Q8NA82 808 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-201ENST00000585325 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-201ENST00000585325 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
PRKCSH-201ENST00000585325 EXOC5O00471 708 aa18.75■□□□□ 0.59
PRKCSH-201ENST00000585325 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
PRKCSH-201ENST00000585325 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
PRKCSH-201ENST00000585325 COG3Q96JB2 828 aa18.74■□□□□ 0.59
PRKCSH-201ENST00000585325 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
PRKCSH-201ENST00000585325 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
PRKCSH-201ENST00000585325 RGPD3A6NKT7 1758 aaPredicted RBP18.73■□□□□ 0.59
PRKCSH-201ENST00000585325 RGPD4Q7Z3J3 1758 aa18.73■□□□□ 0.59
PRKCSH-201ENST00000585325 PLSCR1O15162 318 aa18.72■□□□□ 0.59
PRKCSH-201ENST00000585325 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
PRKCSH-201ENST00000585325 PDGFDQ9GZP0 370 aaPredicted RBP18.72■□□□□ 0.59
PRKCSH-201ENST00000585325 SENP3-EIF4A1A0A087X0R7 540 aa18.71■□□□□ 0.59
PRKCSH-201ENST00000585325 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
PRKCSH-201ENST00000585325 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
PRKCSH-201ENST00000585325 BCL9O00512 1426 aa18.71■□□□□ 0.59
PRKCSH-201ENST00000585325 MYOM1P52179 1685 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 IL2RBP14784 551 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 IP6K1Q92551 441 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
PRKCSH-201ENST00000585325 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
PRKCSH-201ENST00000585325 FAM208AQ9UK61 1670 aaKnown RBP18.69■□□□□ 0.58
PRKCSH-201ENST00000585325 PTGER2P43116 358 aa18.68■□□□□ 0.58
PRKCSH-201ENST00000585325 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
PRKCSH-201ENST00000585325 FBLN1P23142 703 aa18.67■□□□□ 0.58
PRKCSH-201ENST00000585325 AMPHP49418 695 aa18.67■□□□□ 0.58
PRKCSH-201ENST00000585325 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
PRKCSH-201ENST00000585325 HOXC9P31274 260 aa18.66■□□□□ 0.58
PRKCSH-201ENST00000585325 ATF5Q9Y2D1 282 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-201ENST00000585325 KIF20BQ96Q89 1820 aa18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 FYB1O15117 783 aa18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 C1QTNF8P60827 252 aa18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 FHDC1Q9C0D6 1143 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 NHSQ6T4R5 1651 aa18.65■□□□□ 0.58
PRKCSH-201ENST00000585325 PROM2Q8N271 834 aa18.64■□□□□ 0.57
PRKCSH-201ENST00000585325 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
PRKCSH-201ENST00000585325 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
PRKCSH-201ENST00000585325 RTL1A6NKG5 1358 aa18.62■□□□□ 0.57
PRKCSH-201ENST00000585325 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
PRKCSH-201ENST00000585325 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
PRKCSH-201ENST00000585325 STK32BQ9NY57 414 aa18.61■□□□□ 0.57
PRKCSH-201ENST00000585325 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
PRKCSH-201ENST00000585325 SLC15A2Q16348 729 aa18.59■□□□□ 0.57
PRKCSH-201ENST00000585325 IFFO2Q5TF58 517 aa18.59■□□□□ 0.57
PRKCSH-201ENST00000585325 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
PRKCSH-201ENST00000585325 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
PRKCSH-201ENST00000585325 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms