RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
VAPA-209ENST00000585042 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
VAPA-209ENST00000585042 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
VAPA-209ENST00000585042 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
VAPA-209ENST00000585042 PLSCR1O15162 318 aa21.36■■□□□ 1.01
VAPA-209ENST00000585042 CARD10Q9BWT7 1032 aa21.36■■□□□ 1.01
VAPA-209ENST00000585042 RREB1Q92766 1687 aa21.35■■□□□ 1.01
VAPA-209ENST00000585042 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
VAPA-209ENST00000585042 CARD11Q9BXL7 1154 aa21.34■■□□□ 1.01
VAPA-209ENST00000585042 BCL9O00512 1426 aa21.34■■□□□ 1.01
VAPA-209ENST00000585042 BCL11BQ9C0K0 894 aaPredicted RBP21.33■■□□□ 1.01
VAPA-209ENST00000585042 PEAK1Q9H792 1746 aa21.32■■□□□ 1
VAPA-209ENST00000585042 ABCC6O95255 1503 aa21.32■■□□□ 1
VAPA-209ENST00000585042 USP31Q70CQ4 1352 aa21.32■■□□□ 1
VAPA-209ENST00000585042 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
VAPA-209ENST00000585042 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
VAPA-209ENST00000585042 LRRC37A3O60309 1634 aa21.29■■□□□ 1
VAPA-209ENST00000585042 CCDC7Q96M83 1385 aa21.29■■□□□ 1
VAPA-209ENST00000585042 EXOC5O00471 708 aa21.29■■□□□ 1
VAPA-209ENST00000585042 SLC24A1O60721 1099 aa21.29■■□□□ 1
VAPA-209ENST00000585042 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
VAPA-209ENST00000585042 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
VAPA-209ENST00000585042 NFAT5O94916 1531 aa21.29■■□□□ 1
VAPA-209ENST00000585042 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
VAPA-209ENST00000585042 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
VAPA-209ENST00000585042 SBF2Q86WG5 1849 aa21.28■■□□□ 1
VAPA-209ENST00000585042 MON2Q7Z3U7 1717 aa21.28■■□□□ 1
VAPA-209ENST00000585042 SOX12O15370 315 aa21.27■■□□□ 1
VAPA-209ENST00000585042 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
VAPA-209ENST00000585042 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
VAPA-209ENST00000585042 RGPD5Q99666 1765 aa21.26■□□□□ 0.99
VAPA-209ENST00000585042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.26■□□□□ 0.99
VAPA-209ENST00000585042 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
VAPA-209ENST00000585042 WNK3Q9BYP7 1800 aa21.25■□□□□ 0.99
VAPA-209ENST00000585042 TMC1Q8TDI8 760 aa21.25■□□□□ 0.99
VAPA-209ENST00000585042 SPON1Q9HCB6 807 aa21.25■□□□□ 0.99
VAPA-209ENST00000585042 CD163L1Q9NR16 1453 aa21.25■□□□□ 0.99
VAPA-209ENST00000585042 SLC12A5Q9H2X9 1139 aa21.24■□□□□ 0.99
VAPA-209ENST00000585042 EDC4Q6P2E9 1401 aaKnown RBP21.23■□□□□ 0.99
VAPA-209ENST00000585042 KCNQ2O43526 872 aa21.23■□□□□ 0.99
VAPA-209ENST00000585042 NME9Q86XW9 330 aa21.22■□□□□ 0.99
VAPA-209ENST00000585042 ERBB3P21860 1342 aa21.22■□□□□ 0.99
VAPA-209ENST00000585042 ADRA2BP18089 450 aa21.21■□□□□ 0.99
VAPA-209ENST00000585042 NINLQ9Y2I6 1382 aa21.21■□□□□ 0.99
VAPA-209ENST00000585042 PROM2Q8N271 834 aa21.2■□□□□ 0.98
VAPA-209ENST00000585042 PTF1AQ7RTS3 328 aa21.19■□□□□ 0.98
VAPA-209ENST00000585042 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
VAPA-209ENST00000585042 TNS2Q63HR2 1409 aa21.18■□□□□ 0.98
VAPA-209ENST00000585042 IL2RBP14784 551 aa21.17■□□□□ 0.98
VAPA-209ENST00000585042 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
VAPA-209ENST00000585042 TXNRD1Q16881 649 aa21.16■□□□□ 0.98
VAPA-209ENST00000585042 ANKRD24Q8TF21 1146 aa21.16■□□□□ 0.98
VAPA-209ENST00000585042 TESK2Q96S53 571 aa21.16■□□□□ 0.98
VAPA-209ENST00000585042 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
VAPA-209ENST00000585042 IP6K1Q92551 441 aa21.15■□□□□ 0.98
VAPA-209ENST00000585042 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
VAPA-209ENST00000585042 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.97
VAPA-209ENST00000585042 LTN1O94822 1766 aa21.14■□□□□ 0.97
VAPA-209ENST00000585042 STK32BQ9NY57 414 aa21.12■□□□□ 0.97
VAPA-209ENST00000585042 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
VAPA-209ENST00000585042 SLC15A2Q16348 729 aa21.11■□□□□ 0.97
VAPA-209ENST00000585042 COG3Q96JB2 828 aa21.1■□□□□ 0.97
VAPA-209ENST00000585042 CASZ1Q86V15 1759 aa21.09■□□□□ 0.97
VAPA-209ENST00000585042 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
VAPA-209ENST00000585042 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
VAPA-209ENST00000585042 ACSBG1Q96GR2 724 aa21.06■□□□□ 0.96
VAPA-209ENST00000585042 ANKRD36BQ8N2N9 1353 aa21.06■□□□□ 0.96
VAPA-209ENST00000585042 FAM208AQ9UK61 1670 aaKnown RBP21.05■□□□□ 0.96
VAPA-209ENST00000585042 TMF1P82094 1093 aa21.05■□□□□ 0.96
VAPA-209ENST00000585042 HOXC9P31274 260 aa21.04■□□□□ 0.96
VAPA-209ENST00000585042 PTGER2P43116 358 aa21.04■□□□□ 0.96
VAPA-209ENST00000585042 AMPHP49418 695 aa21.04■□□□□ 0.96
VAPA-209ENST00000585042 PDGFDQ9GZP0 370 aaPredicted RBP21.04■□□□□ 0.96
VAPA-209ENST00000585042 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
VAPA-209ENST00000585042 ZBTB7AO95365 584 aa21.03■□□□□ 0.96
VAPA-209ENST00000585042 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
VAPA-209ENST00000585042 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
VAPA-209ENST00000585042 FYB1O15117 783 aa21.01■□□□□ 0.95
VAPA-209ENST00000585042 YY1P25490 414 aa21.01■□□□□ 0.95
VAPA-209ENST00000585042 SLC27A3Q5K4L6 730 aa21.01■□□□□ 0.95
VAPA-209ENST00000585042 DDX54Q8TDD1 881 aaKnown RBP21.01■□□□□ 0.95
VAPA-209ENST00000585042 LTV1Q96GA3 475 aaPredicted RBP21.01■□□□□ 0.95
VAPA-209ENST00000585042 RTL1A6NKG5 1358 aa21■□□□□ 0.95
VAPA-209ENST00000585042 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
VAPA-209ENST00000585042 ATF5Q9Y2D1 282 aaPredicted RBP21■□□□□ 0.95
VAPA-209ENST00000585042 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
VAPA-209ENST00000585042 BTAF1O14981 1849 aa20.99■□□□□ 0.95
VAPA-209ENST00000585042 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
VAPA-209ENST00000585042 USP47Q96K76 1375 aa20.98■□□□□ 0.95
VAPA-209ENST00000585042 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
VAPA-209ENST00000585042 SGIP1Q9BQI5 828 aa20.98■□□□□ 0.95
VAPA-209ENST00000585042 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
VAPA-209ENST00000585042 FBLN1P23142 703 aa20.96■□□□□ 0.95
VAPA-209ENST00000585042 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
VAPA-209ENST00000585042 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
VAPA-209ENST00000585042 KIF24Q5T7B8 1368 aa20.96■□□□□ 0.95
VAPA-209ENST00000585042 SYT17Q9BSW7 474 aa20.95■□□□□ 0.94
VAPA-209ENST00000585042 PRIM1P49642 420 aaKnown RBP20.94■□□□□ 0.94
VAPA-209ENST00000585042 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
VAPA-209ENST00000585042 GGNBP2Q9H3C7 697 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms