RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-222ENST00000584377 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
CSNK1D-222ENST00000584377 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
CSNK1D-222ENST00000584377 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
CSNK1D-222ENST00000584377 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-222ENST00000584377 CPS1P31327 1500 aa16.74■□□□□ 0.27
CSNK1D-222ENST00000584377 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-222ENST00000584377 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-222ENST00000584377 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-222ENST00000584377 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
CSNK1D-222ENST00000584377 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
CSNK1D-222ENST00000584377 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
CSNK1D-222ENST00000584377 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
CSNK1D-222ENST00000584377 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
CSNK1D-222ENST00000584377 GNAI1P63096 354 aa16.72■□□□□ 0.27
CSNK1D-222ENST00000584377 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
CSNK1D-222ENST00000584377 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-222ENST00000584377 VAMP4O75379 141 aa16.7■□□□□ 0.26
CSNK1D-222ENST00000584377 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
CSNK1D-222ENST00000584377 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
CSNK1D-222ENST00000584377 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
CSNK1D-222ENST00000584377 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
CSNK1D-222ENST00000584377 BECN1Q14457 450 aa16.69■□□□□ 0.26
CSNK1D-222ENST00000584377 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
CSNK1D-222ENST00000584377 C3P01024 1663 aa16.69■□□□□ 0.26
CSNK1D-222ENST00000584377 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
CSNK1D-222ENST00000584377 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
CSNK1D-222ENST00000584377 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
CSNK1D-222ENST00000584377 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
CSNK1D-222ENST00000584377 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
CSNK1D-222ENST00000584377 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-222ENST00000584377 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
CSNK1D-222ENST00000584377 LTKP29376 864 aa16.67■□□□□ 0.26
CSNK1D-222ENST00000584377 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
CSNK1D-222ENST00000584377 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
CSNK1D-222ENST00000584377 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
CSNK1D-222ENST00000584377 TTC21BQ7Z4L5 1316 aa16.66■□□□□ 0.26
CSNK1D-222ENST00000584377 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
CSNK1D-222ENST00000584377 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
CSNK1D-222ENST00000584377 ACEP12821 1306 aa16.66■□□□□ 0.26
CSNK1D-222ENST00000584377 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
CSNK1D-222ENST00000584377 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-222ENST00000584377 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
CSNK1D-222ENST00000584377 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-222ENST00000584377 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
CSNK1D-222ENST00000584377 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-222ENST00000584377 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 ZBTB7BO15156 539 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 NUCB1Q02818 461 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 DCTN1Q14203 1278 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 CEBPAP49715 358 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
CSNK1D-222ENST00000584377 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
CSNK1D-222ENST00000584377 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
CSNK1D-222ENST00000584377 USP6P35125 1406 aa16.62■□□□□ 0.25
CSNK1D-222ENST00000584377 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
CSNK1D-222ENST00000584377 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
CSNK1D-222ENST00000584377 ABCC4O15439 1325 aa16.61■□□□□ 0.25
CSNK1D-222ENST00000584377 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
CSNK1D-222ENST00000584377 LNPKQ9C0E8 428 aa16.61■□□□□ 0.25
CSNK1D-222ENST00000584377 MFAP1P55081 439 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-222ENST00000584377 CHD1LQ86WJ1 897 aa16.6■□□□□ 0.25
CSNK1D-222ENST00000584377 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
CSNK1D-222ENST00000584377 TOPAZ1Q8N9V7 1692 aa16.6■□□□□ 0.25
CSNK1D-222ENST00000584377 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
CSNK1D-222ENST00000584377 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-222ENST00000584377 GCC1Q96CN9 775 aa16.58■□□□□ 0.25
CSNK1D-222ENST00000584377 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.25
CSNK1D-222ENST00000584377 SOX12O15370 315 aa16.58■□□□□ 0.24
CSNK1D-222ENST00000584377 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
CSNK1D-222ENST00000584377 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
CSNK1D-222ENST00000584377 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
CSNK1D-222ENST00000584377 MCM10Q7L590 875 aa16.56■□□□□ 0.24
CSNK1D-222ENST00000584377 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
CSNK1D-222ENST00000584377 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-222ENST00000584377 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
CSNK1D-222ENST00000584377 ANTXR1Q9H6X2 564 aa16.55■□□□□ 0.24
CSNK1D-222ENST00000584377 TBX22Q9Y458 520 aa16.55■□□□□ 0.24
CSNK1D-222ENST00000584377 CHL1O00533 1208 aa16.54■□□□□ 0.24
CSNK1D-222ENST00000584377 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
CSNK1D-222ENST00000584377 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
CSNK1D-222ENST00000584377 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
CSNK1D-222ENST00000584377 SLIT1O75093 1534 aa16.53■□□□□ 0.24
CSNK1D-222ENST00000584377 KRT24Q2M2I5 525 aa16.53■□□□□ 0.24
CSNK1D-222ENST00000584377 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
CSNK1D-222ENST00000584377 ARHGAP23Q9P227 1491 aa16.53■□□□□ 0.24
CSNK1D-222ENST00000584377 MAP3K19Q56UN5 1328 aa16.53■□□□□ 0.24
CSNK1D-222ENST00000584377 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-222ENST00000584377 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms