RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
CDK5RAP3-233ENST00000584186 BAG6P46379 1132 aa19.12■□□□□ 0.65
CDK5RAP3-233ENST00000584186 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-233ENST00000584186 TMF1P82094 1093 aa19.11■□□□□ 0.65
CDK5RAP3-233ENST00000584186 FAM196AQ6ZSG2 479 aa19.11■□□□□ 0.65
CDK5RAP3-233ENST00000584186 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
CDK5RAP3-233ENST00000584186 USP31Q70CQ4 1352 aa19.1■□□□□ 0.65
CDK5RAP3-233ENST00000584186 TRIM37O94972 964 aa19.1■□□□□ 0.65
CDK5RAP3-233ENST00000584186 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
CDK5RAP3-233ENST00000584186 NFAT5O94916 1531 aa19.1■□□□□ 0.65
CDK5RAP3-233ENST00000584186 COL18A1P39060 1754 aa19.09■□□□□ 0.65
CDK5RAP3-233ENST00000584186 WDR17Q8IZU2 1322 aa19.09■□□□□ 0.65
CDK5RAP3-233ENST00000584186 EN1Q05925 392 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-233ENST00000584186 NINLQ9Y2I6 1382 aa19.08■□□□□ 0.65
CDK5RAP3-233ENST00000584186 RGPD1P0DJD0 1748 aa19.06■□□□□ 0.64
CDK5RAP3-233ENST00000584186 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
CDK5RAP3-233ENST00000584186 DDB1Q16531 1140 aa19.05■□□□□ 0.64
CDK5RAP3-233ENST00000584186 APBA3O96018 575 aa19.04■□□□□ 0.64
CDK5RAP3-233ENST00000584186 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-233ENST00000584186 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
CDK5RAP3-233ENST00000584186 COG3Q96JB2 828 aa19.03■□□□□ 0.64
CDK5RAP3-233ENST00000584186 CARD10Q9BWT7 1032 aa19.03■□□□□ 0.64
CDK5RAP3-233ENST00000584186 USP54Q70EL1 1684 aa19.02■□□□□ 0.64
CDK5RAP3-233ENST00000584186 NLRP2Q9NX02 1062 aa19.02■□□□□ 0.64
CDK5RAP3-233ENST00000584186 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CDK5RAP3-233ENST00000584186 OVOS2A0A0J9YW53 1432 aa19.01■□□□□ 0.63
CDK5RAP3-233ENST00000584186 OVOS2Q6IE36 1432 aa19.01■□□□□ 0.63
CDK5RAP3-233ENST00000584186 TNS1Q9HBL0 1735 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-233ENST00000584186 EZH2Q15910 746 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-233ENST00000584186 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-233ENST00000584186 PSDA5PKW4 1024 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-233ENST00000584186 LTN1O94822 1766 aa19■□□□□ 0.63
CDK5RAP3-233ENST00000584186 LRRC37A3O60309 1634 aa19■□□□□ 0.63
CDK5RAP3-233ENST00000584186 ABCC6O95255 1503 aa19■□□□□ 0.63
CDK5RAP3-233ENST00000584186 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
CDK5RAP3-233ENST00000584186 OVOS2A0A0G2JMS6 1433 aa18.99■□□□□ 0.63
CDK5RAP3-233ENST00000584186 DISP2A7MBM2 1401 aa18.99■□□□□ 0.63
CDK5RAP3-233ENST00000584186 ERBB3P21860 1342 aa18.99■□□□□ 0.63
CDK5RAP3-233ENST00000584186 CCDC7Q96M83 1385 aa18.98■□□□□ 0.63
CDK5RAP3-233ENST00000584186 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-233ENST00000584186 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 EXOC5O00471 708 aa18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 FBLN1P23142 703 aa18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 CAMKK2Q96RR4 588 aa18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
CDK5RAP3-233ENST00000584186 WNK3Q9BYP7 1800 aa18.96■□□□□ 0.63
CDK5RAP3-233ENST00000584186 MARCH10Q8NA82 808 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-233ENST00000584186 IP6K1Q92551 441 aa18.96■□□□□ 0.63
CDK5RAP3-233ENST00000584186 FYB1O15117 783 aa18.95■□□□□ 0.62
CDK5RAP3-233ENST00000584186 AMPHP49418 695 aa18.95■□□□□ 0.62
CDK5RAP3-233ENST00000584186 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
CDK5RAP3-233ENST00000584186 R3HDM1Q15032 1099 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-233ENST00000584186 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
CDK5RAP3-233ENST00000584186 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
CDK5RAP3-233ENST00000584186 IL2RBP14784 551 aa18.92■□□□□ 0.62
CDK5RAP3-233ENST00000584186 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDK5RAP3-233ENST00000584186 RRS1Q15050 365 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-233ENST00000584186 HOXC9P31274 260 aa18.91■□□□□ 0.62
CDK5RAP3-233ENST00000584186 PTF1AQ7RTS3 328 aa18.91■□□□□ 0.62
CDK5RAP3-233ENST00000584186 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
CDK5RAP3-233ENST00000584186 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-233ENST00000584186 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-233ENST00000584186 TNS2Q63HR2 1409 aa18.9■□□□□ 0.62
CDK5RAP3-233ENST00000584186 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
CDK5RAP3-233ENST00000584186 MYOM1P52179 1685 aa18.89■□□□□ 0.61
CDK5RAP3-233ENST00000584186 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
CDK5RAP3-233ENST00000584186 SBF2Q86WG5 1849 aa18.86■□□□□ 0.61
CDK5RAP3-233ENST00000584186 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
CDK5RAP3-233ENST00000584186 BCL9O00512 1426 aa18.85■□□□□ 0.61
CDK5RAP3-233ENST00000584186 RTL1A6NKG5 1358 aa18.85■□□□□ 0.61
CDK5RAP3-233ENST00000584186 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
CDK5RAP3-233ENST00000584186 RREB1Q92766 1687 aa18.85■□□□□ 0.61
CDK5RAP3-233ENST00000584186 PLSCR1O15162 318 aa18.84■□□□□ 0.61
CDK5RAP3-233ENST00000584186 KCNQ2O43526 872 aa18.84■□□□□ 0.61
CDK5RAP3-233ENST00000584186 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-233ENST00000584186 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.61
CDK5RAP3-233ENST00000584186 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.6
CDK5RAP3-233ENST00000584186 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-233ENST00000584186 CGNL1Q0VF96 1302 aa18.82■□□□□ 0.6
CDK5RAP3-233ENST00000584186 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-233ENST00000584186 USHBP1Q8N6Y0 703 aa18.82■□□□□ 0.6
CDK5RAP3-233ENST00000584186 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-233ENST00000584186 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
CDK5RAP3-233ENST00000584186 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
CDK5RAP3-233ENST00000584186 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
CDK5RAP3-233ENST00000584186 FLT4P35916 1363 aa18.8■□□□□ 0.6
CDK5RAP3-233ENST00000584186 RGPD2P0DJD1 1756 aa18.79■□□□□ 0.6
CDK5RAP3-233ENST00000584186 PROM2Q8N271 834 aa18.79■□□□□ 0.6
CDK5RAP3-233ENST00000584186 PANK3Q9H999 370 aa18.79■□□□□ 0.6
CDK5RAP3-233ENST00000584186 INSRP06213 1382 aa18.79■□□□□ 0.6
CDK5RAP3-233ENST00000584186 LRP5O75197 1615 aa18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 TXNRD1Q16881 649 aa18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
CDK5RAP3-233ENST00000584186 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
CDK5RAP3-233ENST00000584186 MEGF6O75095 1541 aa18.77■□□□□ 0.6
CDK5RAP3-233ENST00000584186 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms