RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
NUP85-221ENST00000583548 PRR36Q9H6K5 1346 aa9.56□□□□□ -0.88
NUP85-221ENST00000583548 SPATA31E1Q6ZUB1 1445 aa9.56□□□□□ -0.88
NUP85-221ENST00000583548 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
NUP85-221ENST00000583548 ADCY9O60503 1353 aa9.56□□□□□ -0.88
NUP85-221ENST00000583548 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
NUP85-221ENST00000583548 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
NUP85-221ENST00000583548 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
NUP85-221ENST00000583548 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
NUP85-221ENST00000583548 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
NUP85-221ENST00000583548 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
NUP85-221ENST00000583548 ITSN1Q15811 1721 aa9.55□□□□□ -0.88
NUP85-221ENST00000583548 USP19O94966 1318 aa9.55□□□□□ -0.88
NUP85-221ENST00000583548 BRD4O60885 1362 aaPredicted RBP9.54□□□□□ -0.88
NUP85-221ENST00000583548 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 NLGN2Q8NFZ4 835 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 ZNF526Q8TF50 670 aaPredicted RBP9.54□□□□□ -0.88
NUP85-221ENST00000583548 HIRIP3Q9BW71 556 aaPredicted RBP9.54□□□□□ -0.88
NUP85-221ENST00000583548 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
NUP85-221ENST00000583548 GCP02774 474 aa9.53□□□□□ -0.88
NUP85-221ENST00000583548 CFAP70Q5T0N1 1121 aa9.53□□□□□ -0.88
NUP85-221ENST00000583548 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
NUP85-221ENST00000583548 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 EXOC5O00471 708 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 KIF3CO14782 793 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 TOMM70O94826 608 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 COL24A1Q17RW2 1714 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 JMYQ8N9B5 988 aa9.52□□□□□ -0.89
NUP85-221ENST00000583548 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
NUP85-221ENST00000583548 WDR17Q8IZU2 1322 aa9.51□□□□□ -0.89
NUP85-221ENST00000583548 QSER1Q2KHR3 1735 aa9.51□□□□□ -0.89
NUP85-221ENST00000583548 ZNF827Q17R98 1081 aa9.5□□□□□ -0.89
NUP85-221ENST00000583548 SLC27A3Q5K4L6 730 aa9.5□□□□□ -0.89
NUP85-221ENST00000583548 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
NUP85-221ENST00000583548 KLRG1Q96E93 195 aa9.5□□□□□ -0.89
NUP85-221ENST00000583548 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
NUP85-221ENST00000583548 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
NUP85-221ENST00000583548 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
NUP85-221ENST00000583548 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
NUP85-221ENST00000583548 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
NUP85-221ENST00000583548 ACEP12821 1306 aa9.49□□□□□ -0.89
NUP85-221ENST00000583548 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 PNPLA7Q6ZV29 1317 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 CCDC7Q96M83 1385 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 USP6P35125 1406 aa9.48□□□□□ -0.89
NUP85-221ENST00000583548 WDR90Q96KV7 1748 aa9.47□□□□□ -0.89
NUP85-221ENST00000583548 ADGRB1O14514 1584 aa9.46□□□□□ -0.89
NUP85-221ENST00000583548 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
NUP85-221ENST00000583548 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.9
NUP85-221ENST00000583548 LRRC4BQ9NT99 713 aa9.46□□□□□ -0.9
NUP85-221ENST00000583548 ARHGEF28Q8N1W1 1705 aaKnown RBP9.45□□□□□ -0.9
NUP85-221ENST00000583548 CSB-PGBD3P0DP91 1061 aa9.45□□□□□ -0.9
NUP85-221ENST00000583548 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
NUP85-221ENST00000583548 ABCC6O95255 1503 aa9.45□□□□□ -0.9
NUP85-221ENST00000583548 TRPM1Q7Z4N2 1603 aa9.45□□□□□ -0.9
NUP85-221ENST00000583548 FSTL1Q12841 308 aa9.44□□□□□ -0.9
NUP85-221ENST00000583548 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
NUP85-221ENST00000583548 SLIT3O75094 1523 aa9.44□□□□□ -0.9
NUP85-221ENST00000583548 NLRP6P59044 892 aa9.43□□□□□ -0.9
NUP85-221ENST00000583548 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
NUP85-221ENST00000583548 CDK19Q9BWU1 502 aa9.43□□□□□ -0.9
NUP85-221ENST00000583548 BTAF1O14981 1849 aa9.42□□□□□ -0.9
NUP85-221ENST00000583548 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
NUP85-221ENST00000583548 PPIP5K1Q6PFW1 1433 aa9.42□□□□□ -0.9
NUP85-221ENST00000583548 KCNH5Q8NCM2 988 aa9.42□□□□□ -0.9
NUP85-221ENST00000583548 GOLGB1Q14789 3259 aaKnown RBP9.41□□□□□ -0.9
NUP85-221ENST00000583548 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
NUP85-221ENST00000583548 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
NUP85-221ENST00000583548 COL18A1P39060 1754 aa9.4□□□□□ -0.9
NUP85-221ENST00000583548 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
NUP85-221ENST00000583548 CICQ96RK0 1608 aaPredicted RBP9.39□□□□□ -0.91
NUP85-221ENST00000583548 IGSF1Q8N6C5 1336 aa9.39□□□□□ -0.91
NUP85-221ENST00000583548 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
NUP85-221ENST00000583548 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
NUP85-221ENST00000583548 IL2RBP14784 551 aa9.39□□□□□ -0.91
NUP85-221ENST00000583548 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
NUP85-221ENST00000583548 MPHOSPH9Q99550 1183 aa9.39□□□□□ -0.91
NUP85-221ENST00000583548 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
NUP85-221ENST00000583548 PIK3C2AO00443 1686 aa9.38□□□□□ -0.91
NUP85-221ENST00000583548 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
NUP85-221ENST00000583548 MSL1Q68DK7 614 aa9.37□□□□□ -0.91
NUP85-221ENST00000583548 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
NUP85-221ENST00000583548 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
NUP85-221ENST00000583548 HTRA3P83110 453 aa9.36□□□□□ -0.91
NUP85-221ENST00000583548 CCNL1Q9UK58 526 aaPredicted RBP9.36□□□□□ -0.91
NUP85-221ENST00000583548 C10orf71Q711Q0 1435 aa9.36□□□□□ -0.91
NUP85-221ENST00000583548 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
NUP85-221ENST00000583548 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
NUP85-221ENST00000583548 SMC1BQ8NDV3 1235 aa9.35□□□□□ -0.91
NUP85-221ENST00000583548 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
NUP85-221ENST00000583548 ANKRD36BQ8N2N9 1353 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms