RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
SKA2-207ENST00000583380 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
SKA2-207ENST00000583380 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
SKA2-207ENST00000583380 EGFL6Q8IUX8 553 aa11.28□□□□□ -0.6
SKA2-207ENST00000583380 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SKA2-207ENST00000583380 JRKLQ9Y4A0 524 aa11.28□□□□□ -0.6
SKA2-207ENST00000583380 CCDC141Q6ZP82 1450 aa11.27□□□□□ -0.6
SKA2-207ENST00000583380 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.6
SKA2-207ENST00000583380 KDM4AO75164 1064 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 ERCC3P19447 782 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 SSFA2P28290 1259 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 MAGEA9P43362 315 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
SKA2-207ENST00000583380 TUBB4BP68371 445 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 TMF1P82094 1093 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.61
SKA2-207ENST00000583380 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.27□□□□□ -0.61
SKA2-207ENST00000583380 MKRN1Q9UHC7 482 aaKnown RBP11.27□□□□□ -0.61
SKA2-207ENST00000583380 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
SKA2-207ENST00000583380 PTPRGP23470 1445 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
SKA2-207ENST00000583380 GSCP56915 257 aaPredicted RBP11.26□□□□□ -0.61
SKA2-207ENST00000583380 CCDC183Q5T5S1 534 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 ATP6V1DQ9Y5K8 247 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 CUL7Q14999 1698 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 NUP160Q12769 1436 aa11.26□□□□□ -0.61
SKA2-207ENST00000583380 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 ATP2B1P20020 1258 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 TDO2P48775 406 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 MVPQ14764 893 aaKnown RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 ZKSCAN8Q15776 578 aaPredicted RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 FILIP1Q7Z7B0 1213 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
SKA2-207ENST00000583380 KCND1Q9NSA2 647 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
SKA2-207ENST00000583380 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
SKA2-207ENST00000583380 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 SYCE3A1L190 88 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 TTC36A6NLP5 189 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 CCP110O43303 1012 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 ADCY5O95622 1261 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
SKA2-207ENST00000583380 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
SKA2-207ENST00000583380 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 MYO1CO00159 1063 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 ZBTB22O15209 634 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 MSL3Q8N5Y2 521 aaKnown RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
SKA2-207ENST00000583380 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
SKA2-207ENST00000583380 EPB41L2O43491 1005 aaKnown RBP11.22□□□□□ -0.61
SKA2-207ENST00000583380 NRDCO43847 1150 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 CDC45O75419 566 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 JAKMIP3Q5VZ66 844 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 MCTP2Q6DN12 878 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 LEKR1Q6ZMV7 388 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 STAG1Q8WVM7 1258 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
SKA2-207ENST00000583380 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
SKA2-207ENST00000583380 DAPK1P53355 1430 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.61
SKA2-207ENST00000583380 CPP00450 1065 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 NUCB1Q02818 461 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 GPT2Q8TD30 523 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.61
SKA2-207ENST00000583380 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 ADGRL2O95490 1459 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 PLB1Q6P1J6 1458 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 PTPRCP08575 1304 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 TMCO5BA8MYB1 307 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 GOLIM4O00461 696 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
SKA2-207ENST00000583380 TNNT1P13805 278 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 MX1P20591 662 aa11.2□□□□□ -0.62
SKA2-207ENST00000583380 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms