RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 FAM98CQ17RN3 349 aaKnown RBP28.54■■■□□ 2.16
PPP4R1-221ENST00000582240 USP54Q70EL1 1684 aa28.53■■■□□ 2.16
PPP4R1-221ENST00000582240 WASHC2AQ641Q2 1341 aa28.52■■■□□ 2.16
PPP4R1-221ENST00000582240 CCDC7Q96M83 1385 aa28.51■■■□□ 2.16
PPP4R1-221ENST00000582240 SEPT12Q8IYM1 358 aa28.51■■■□□ 2.15
PPP4R1-221ENST00000582240 COL18A1P39060 1754 aa28.5■■■□□ 2.15
PPP4R1-221ENST00000582240 SPATA31A1Q5TZJ5 1347 aa28.5■■■□□ 2.15
PPP4R1-221ENST00000582240 A0A0G2JS52 829 aa28.5■■■□□ 2.15
PPP4R1-221ENST00000582240 MYT1Q01538 1121 aa28.5■■■□□ 2.15
PPP4R1-221ENST00000582240 COL5A2P05997 1499 aaPredicted RBP28.5■■■□□ 2.15
PPP4R1-221ENST00000582240 RRS1Q15050 365 aaKnown RBP28.49■■■□□ 2.15
PPP4R1-221ENST00000582240 CGNL1Q0VF96 1302 aa28.48■■■□□ 2.15
PPP4R1-221ENST00000582240 CSB-PGBD3P0DP91 1061 aa28.47■■■□□ 2.15
PPP4R1-221ENST00000582240 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
PPP4R1-221ENST00000582240 ONECUT3O60422 494 aaPredicted RBP28.45■■■□□ 2.14
PPP4R1-221ENST00000582240 TOM1L2Q6ZVM7 507 aa28.45■■■□□ 2.14
PPP4R1-221ENST00000582240 KIF20BQ96Q89 1820 aa28.44■■■□□ 2.14
PPP4R1-221ENST00000582240 LTV1Q96GA3 475 aaPredicted RBP28.44■■■□□ 2.14
PPP4R1-221ENST00000582240 AMPHP49418 695 aa28.43■■■□□ 2.14
PPP4R1-221ENST00000582240 RGPD5Q99666 1765 aa28.42■■■□□ 2.14
PPP4R1-221ENST00000582240 TNNT2P45379 298 aaPredicted RBP28.42■■■□□ 2.14
PPP4R1-221ENST00000582240 IP6K1Q92551 441 aa28.42■■■□□ 2.14
PPP4R1-221ENST00000582240 KNSTRNQ9Y448 316 aa28.42■■■□□ 2.14
PPP4R1-221ENST00000582240 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
PPP4R1-221ENST00000582240 TCP11L2Q8N4U5 519 aa28.41■■■□□ 2.14
PPP4R1-221ENST00000582240 ANKRD24Q8TF21 1146 aa28.41■■■□□ 2.14
PPP4R1-221ENST00000582240 LTN1O94822 1766 aa28.4■■■□□ 2.14
PPP4R1-221ENST00000582240 CRB1P82279 1406 aa28.4■■■□□ 2.14
PPP4R1-221ENST00000582240 HOXC9P31274 260 aa28.39■■■□□ 2.14
PPP4R1-221ENST00000582240 CNGB1Q14028 1251 aaPredicted RBP28.38■■■□□ 2.13
PPP4R1-221ENST00000582240 EMILIN1Q9Y6C2 1016 aa28.38■■■□□ 2.13
PPP4R1-221ENST00000582240 ZEB1P37275 1124 aaPredicted RBP28.37■■■□□ 2.13
PPP4R1-221ENST00000582240 NLRP2Q9NX02 1062 aa28.37■■■□□ 2.13
PPP4R1-221ENST00000582240 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
PPP4R1-221ENST00000582240 BARGINQ6ZT62 677 aa28.36■■■□□ 2.13
PPP4R1-221ENST00000582240 KRT27Q7Z3Y8 459 aa28.36■■■□□ 2.13
PPP4R1-221ENST00000582240 UPF1Q92900 1129 aaKnown RBP eCLIP28.36■■■□□ 2.13
PPP4R1-221ENST00000582240 PPM1GO15355 546 aaPredicted RBP28.35■■■□□ 2.13
PPP4R1-221ENST00000582240 PER1O15534 1290 aaPredicted RBP28.35■■■□□ 2.13
PPP4R1-221ENST00000582240 ERBB3P21860 1342 aa28.35■■■□□ 2.13
PPP4R1-221ENST00000582240 AMER1Q5JTC6 1135 aaPredicted RBP28.34■■■□□ 2.13
PPP4R1-221ENST00000582240 CARD10Q9BWT7 1032 aa28.34■■■□□ 2.13
PPP4R1-221ENST00000582240 HSP90AB2PQ58FF8 381 aa28.33■■■□□ 2.13
PPP4R1-221ENST00000582240 MORC1Q86VD1 984 aa28.33■■■□□ 2.13
PPP4R1-221ENST00000582240 THRAP3Q9Y2W1 955 aaKnown RBP28.33■■■□□ 2.13
PPP4R1-221ENST00000582240 BRWD3Q6RI45 1802 aa28.33■■■□□ 2.13
PPP4R1-221ENST00000582240 ABCC6O95255 1503 aa28.32■■■□□ 2.12
PPP4R1-221ENST00000582240 CC2D1BQ5T0F9 858 aaKnown RBP28.31■■■□□ 2.12
PPP4R1-221ENST00000582240 BLMP54132 1417 aaPredicted RBP28.3■■■□□ 2.12
PPP4R1-221ENST00000582240 POLKQ9UBT6 870 aa28.3■■■□□ 2.12
PPP4R1-221ENST00000582240 THSD7AQ9UPZ6 1657 aa28.29■■■□□ 2.12
PPP4R1-221ENST00000582240 PEAK1Q9H792 1746 aa28.29■■■□□ 2.12
PPP4R1-221ENST00000582240 NSD2O96028 1365 aa28.27■■■□□ 2.12
PPP4R1-221ENST00000582240 RTL1A6NKG5 1358 aa28.26■■■□□ 2.12
PPP4R1-221ENST00000582240 PDE3BQ13370 1112 aa28.25■■■□□ 2.11
PPP4R1-221ENST00000582240 FLT4P35916 1363 aa28.24■■■□□ 2.11
PPP4R1-221ENST00000582240 USHBP1Q8N6Y0 703 aa28.24■■■□□ 2.11
PPP4R1-221ENST00000582240 ANKRD26Q9UPS8 1709 aa28.23■■■□□ 2.11
PPP4R1-221ENST00000582240 NBPF6Q5VWK0 638 aa28.23■■■□□ 2.11
PPP4R1-221ENST00000582240 NBPF4Q96M43 638 aa28.23■■■□□ 2.11
PPP4R1-221ENST00000582240 INSRP06213 1382 aa28.23■■■□□ 2.11
PPP4R1-221ENST00000582240 DDB1Q16531 1140 aa28.21■■■□□ 2.11
PPP4R1-221ENST00000582240 DISP2A7MBM2 1401 aa28.2■■■□□ 2.11
PPP4R1-221ENST00000582240 MAP2P11137 1827 aaKnown RBP28.18■■■□□ 2.1
PPP4R1-221ENST00000582240 IL2RBP14784 551 aa28.18■■■□□ 2.1
PPP4R1-221ENST00000582240 KIF24Q5T7B8 1368 aa28.18■■■□□ 2.1
PPP4R1-221ENST00000582240 CDCA7Q9BWT1 371 aaPredicted RBP28.17■■■□□ 2.1
PPP4R1-221ENST00000582240 RGPD2P0DJD1 1756 aa28.16■■■□□ 2.1
PPP4R1-221ENST00000582240 EXOC5O00471 708 aa28.16■■■□□ 2.1
PPP4R1-221ENST00000582240 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
PPP4R1-221ENST00000582240 SMG6Q86US8 1419 aaKnown RBP28.15■■■□□ 2.1
PPP4R1-221ENST00000582240 DDX10Q13206 875 aaKnown RBP28.14■■■□□ 2.1
PPP4R1-221ENST00000582240 EIF4A2Q14240 407 aaKnown RBP28.14■■■□□ 2.1
PPP4R1-221ENST00000582240 PARP4Q9UKK3 1724 aaKnown RBP28.14■■■□□ 2.1
PPP4R1-221ENST00000582240 LRRC37A3O60309 1634 aa28.12■■■□□ 2.09
PPP4R1-221ENST00000582240 FAM196AQ6ZSG2 479 aa28.12■■■□□ 2.09
PPP4R1-221ENST00000582240 WNK3Q9BYP7 1800 aa28.12■■■□□ 2.09
PPP4R1-221ENST00000582240 MTHFSP49914 203 aa28.11■■■□□ 2.09
PPP4R1-221ENST00000582240 EYA1Q99502 592 aa28.11■■■□□ 2.09
PPP4R1-221ENST00000582240 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
PPP4R1-221ENST00000582240 TRIM37O94972 964 aa28.1■■■□□ 2.09
PPP4R1-221ENST00000582240 DEFB132Q7Z7B7 95 aa28.09■■■□□ 2.09
PPP4R1-221ENST00000582240 FAM208AQ9UK61 1670 aaKnown RBP28.08■■■□□ 2.09
PPP4R1-221ENST00000582240 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
PPP4R1-221ENST00000582240 MEGF6O75095 1541 aa28.07■■■□□ 2.08
PPP4R1-221ENST00000582240 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
PPP4R1-221ENST00000582240 CCDC125Q86Z20 511 aa28.06■■■□□ 2.08
PPP4R1-221ENST00000582240 TNS2Q63HR2 1409 aa28.05■■■□□ 2.08
PPP4R1-221ENST00000582240 RAPGEF4Q8WZA2 1011 aa28.05■■■□□ 2.08
PPP4R1-221ENST00000582240 TATP17735 454 aaPredicted RBP28.04■■■□□ 2.08
PPP4R1-221ENST00000582240 PTF1AQ7RTS3 328 aa28.04■■■□□ 2.08
PPP4R1-221ENST00000582240 ZCRB1Q8TBF4 217 aaKnown RBP28.03■■■□□ 2.08
PPP4R1-221ENST00000582240 OVOS2A0A0G2JMS6 1433 aa28.02■■■□□ 2.08
PPP4R1-221ENST00000582240 IL13P35225 146 aa28■■■□□ 2.07
PPP4R1-221ENST00000582240 ACSBG1Q96GR2 724 aa28■■■□□ 2.07
PPP4R1-221ENST00000582240 EP400Q96L91 3159 aa27.99■■■□□ 2.07
PPP4R1-221ENST00000582240 EN1Q05925 392 aaPredicted RBP27.99■■■□□ 2.07
PPP4R1-221ENST00000582240 APBA3O96018 575 aa27.98■■■□□ 2.07
PPP4R1-221ENST00000582240 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
PPP4R1-221ENST00000582240 AEBP1Q8IUX7 1158 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms