RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
SRSF1-204ENST00000581979 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
SRSF1-204ENST00000581979 NINLQ9Y2I6 1382 aa17.03■□□□□ 0.32
SRSF1-204ENST00000581979 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
SRSF1-204ENST00000581979 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
SRSF1-204ENST00000581979 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
SRSF1-204ENST00000581979 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
SRSF1-204ENST00000581979 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
SRSF1-204ENST00000581979 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-204ENST00000581979 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
SRSF1-204ENST00000581979 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-204ENST00000581979 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
SRSF1-204ENST00000581979 CCDC184Q52MB2 194 aa17.01■□□□□ 0.31
SRSF1-204ENST00000581979 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
SRSF1-204ENST00000581979 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
SRSF1-204ENST00000581979 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
SRSF1-204ENST00000581979 USP35Q9P2H5 1018 aa17■□□□□ 0.31
SRSF1-204ENST00000581979 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
SRSF1-204ENST00000581979 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
SRSF1-204ENST00000581979 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
SRSF1-204ENST00000581979 COL18A1P39060 1754 aa16.99■□□□□ 0.31
SRSF1-204ENST00000581979 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-204ENST00000581979 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
SRSF1-204ENST00000581979 CARD14Q9BXL6 1004 aa16.99■□□□□ 0.31
SRSF1-204ENST00000581979 FAM182BQ5T319 152 aa16.99■□□□□ 0.31
SRSF1-204ENST00000581979 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
SRSF1-204ENST00000581979 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
SRSF1-204ENST00000581979 ARHGEF25Q86VW2 580 aa16.98■□□□□ 0.31
SRSF1-204ENST00000581979 CRB1P82279 1406 aa16.98■□□□□ 0.31
SRSF1-204ENST00000581979 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
SRSF1-204ENST00000581979 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
SRSF1-204ENST00000581979 BAG6P46379 1132 aa16.96■□□□□ 0.31
SRSF1-204ENST00000581979 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
SRSF1-204ENST00000581979 NFAT5O94916 1531 aa16.96■□□□□ 0.31
SRSF1-204ENST00000581979 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.3
SRSF1-204ENST00000581979 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.3
SRSF1-204ENST00000581979 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.3
SRSF1-204ENST00000581979 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
SRSF1-204ENST00000581979 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
SRSF1-204ENST00000581979 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
SRSF1-204ENST00000581979 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
SRSF1-204ENST00000581979 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-204ENST00000581979 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
SRSF1-204ENST00000581979 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
SRSF1-204ENST00000581979 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
SRSF1-204ENST00000581979 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
SRSF1-204ENST00000581979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
SRSF1-204ENST00000581979 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
SRSF1-204ENST00000581979 ABCC6O95255 1503 aa16.93■□□□□ 0.3
SRSF1-204ENST00000581979 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
SRSF1-204ENST00000581979 SOX12O15370 315 aa16.91■□□□□ 0.3
SRSF1-204ENST00000581979 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
SRSF1-204ENST00000581979 NME9Q86XW9 330 aa16.91■□□□□ 0.3
SRSF1-204ENST00000581979 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
SRSF1-204ENST00000581979 TRIM37O94972 964 aa16.9■□□□□ 0.3
SRSF1-204ENST00000581979 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
SRSF1-204ENST00000581979 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
SRSF1-204ENST00000581979 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
SRSF1-204ENST00000581979 NSD2O96028 1365 aa16.89■□□□□ 0.29
SRSF1-204ENST00000581979 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
SRSF1-204ENST00000581979 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
SRSF1-204ENST00000581979 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
SRSF1-204ENST00000581979 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
SRSF1-204ENST00000581979 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
SRSF1-204ENST00000581979 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
SRSF1-204ENST00000581979 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
SRSF1-204ENST00000581979 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
SRSF1-204ENST00000581979 CAMKK2Q96RR4 588 aa16.87■□□□□ 0.29
SRSF1-204ENST00000581979 DDB1Q16531 1140 aa16.86■□□□□ 0.29
SRSF1-204ENST00000581979 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
SRSF1-204ENST00000581979 PEAK1Q9H792 1746 aa16.86■□□□□ 0.29
SRSF1-204ENST00000581979 APBA3O96018 575 aa16.85■□□□□ 0.29
SRSF1-204ENST00000581979 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
SRSF1-204ENST00000581979 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRSF1-204ENST00000581979 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
SRSF1-204ENST00000581979 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
SRSF1-204ENST00000581979 LTN1O94822 1766 aa16.85■□□□□ 0.29
SRSF1-204ENST00000581979 ERBB3P21860 1342 aa16.84■□□□□ 0.29
SRSF1-204ENST00000581979 BCL9O00512 1426 aa16.82■□□□□ 0.28
SRSF1-204ENST00000581979 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-204ENST00000581979 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
SRSF1-204ENST00000581979 SBF2Q86WG5 1849 aa16.81■□□□□ 0.28
SRSF1-204ENST00000581979 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-204ENST00000581979 FYB1O15117 783 aa16.81■□□□□ 0.28
SRSF1-204ENST00000581979 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-204ENST00000581979 RREB1Q92766 1687 aa16.81■□□□□ 0.28
SRSF1-204ENST00000581979 COG3Q96JB2 828 aa16.8■□□□□ 0.28
SRSF1-204ENST00000581979 LRP5O75197 1615 aa16.79■□□□□ 0.28
SRSF1-204ENST00000581979 IP6K1Q92551 441 aa16.79■□□□□ 0.28
SRSF1-204ENST00000581979 EXOC5O00471 708 aa16.79■□□□□ 0.28
SRSF1-204ENST00000581979 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
SRSF1-204ENST00000581979 R3HDM1Q15032 1099 aaKnown RBP16.78■□□□□ 0.28
SRSF1-204ENST00000581979 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
SRSF1-204ENST00000581979 TNS2Q63HR2 1409 aa16.78■□□□□ 0.28
SRSF1-204ENST00000581979 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
SRSF1-204ENST00000581979 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-204ENST00000581979 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
SRSF1-204ENST00000581979 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.27
SRSF1-204ENST00000581979 PLSCR1O15162 318 aa16.76■□□□□ 0.27
SRSF1-204ENST00000581979 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms