RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
CDK5RAP3-221ENST00000581662 TMEM121BQ9BXQ6 578 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-221ENST00000581662 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
CDK5RAP3-221ENST00000581662 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 ABCC5O15440 1437 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 TRIM37O94972 964 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
CDK5RAP3-221ENST00000581662 ROBO2Q9HCK4 1378 aa12.36□□□□□ -0.43
CDK5RAP3-221ENST00000581662 FOXO3O43524 673 aa12.36□□□□□ -0.43
CDK5RAP3-221ENST00000581662 APBA3O96018 575 aa12.36□□□□□ -0.43
CDK5RAP3-221ENST00000581662 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-221ENST00000581662 PTGER2P43116 358 aa12.36□□□□□ -0.43
CDK5RAP3-221ENST00000581662 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
CDK5RAP3-221ENST00000581662 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
CDK5RAP3-221ENST00000581662 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
CDK5RAP3-221ENST00000581662 IQGAP3Q86VI3 1631 aa12.34□□□□□ -0.43
CDK5RAP3-221ENST00000581662 HSPA6P17066 643 aa12.34□□□□□ -0.43
CDK5RAP3-221ENST00000581662 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
CDK5RAP3-221ENST00000581662 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-221ENST00000581662 ESCO1Q5FWF5 840 aa12.33□□□□□ -0.44
CDK5RAP3-221ENST00000581662 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-221ENST00000581662 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
CDK5RAP3-221ENST00000581662 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
CDK5RAP3-221ENST00000581662 ABCA3Q99758 1704 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 PRELPP51888 382 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 SPATA31A5Q5VU36 1347 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 SPATA31A7Q8IWB4 1347 aa12.31□□□□□ -0.44
CDK5RAP3-221ENST00000581662 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
CDK5RAP3-221ENST00000581662 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-221ENST00000581662 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-221ENST00000581662 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
CDK5RAP3-221ENST00000581662 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
CDK5RAP3-221ENST00000581662 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
CDK5RAP3-221ENST00000581662 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
CDK5RAP3-221ENST00000581662 DAPK1P53355 1430 aa12.28□□□□□ -0.44
CDK5RAP3-221ENST00000581662 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 COL13A1Q5TAT6 717 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 ANKRD30AQ9BXX3 1397 aa12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 RRBP1Q9P2E9 1410 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-221ENST00000581662 VPS8Q8N3P4 1428 aa12.26□□□□□ -0.45
CDK5RAP3-221ENST00000581662 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 EMP3P54852 163 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 E9PCH4 1651 aa12.25□□□□□ -0.45
CDK5RAP3-221ENST00000581662 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-221ENST00000581662 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
CDK5RAP3-221ENST00000581662 KIF1AQ12756 1690 aa12.23□□□□□ -0.45
CDK5RAP3-221ENST00000581662 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-221ENST00000581662 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
CDK5RAP3-221ENST00000581662 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-221ENST00000581662 NAIPQ13075 1403 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 SPATA31A1Q5TZJ5 1347 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
CDK5RAP3-221ENST00000581662 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
CDK5RAP3-221ENST00000581662 GPR162Q16538 588 aa12.19□□□□□ -0.46
CDK5RAP3-221ENST00000581662 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
CDK5RAP3-221ENST00000581662 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
CDK5RAP3-221ENST00000581662 MTFR1LQ9H019 292 aa12.18□□□□□ -0.46
CDK5RAP3-221ENST00000581662 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 PLSCR1O15162 318 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 PPP1R37O75864 691 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 ARXQ96QS3 562 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 ADCY9O60503 1353 aa12.16□□□□□ -0.46
CDK5RAP3-221ENST00000581662 FMN2Q9NZ56 1722 aa12.15□□□□□ -0.46
CDK5RAP3-221ENST00000581662 TECPR2O15040 1411 aa12.15□□□□□ -0.46
CDK5RAP3-221ENST00000581662 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
CDK5RAP3-221ENST00000581662 APLP1P51693 650 aa12.14□□□□□ -0.47
CDK5RAP3-221ENST00000581662 PSME1Q06323 249 aa12.14□□□□□ -0.47
CDK5RAP3-221ENST00000581662 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-221ENST00000581662 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-221ENST00000581662 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-221ENST00000581662 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
CDK5RAP3-221ENST00000581662 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
CDK5RAP3-221ENST00000581662 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
CDK5RAP3-221ENST00000581662 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
CDK5RAP3-221ENST00000581662 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
CDK5RAP3-221ENST00000581662 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
CDK5RAP3-221ENST00000581662 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
CDK5RAP3-221ENST00000581662 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
CDK5RAP3-221ENST00000581662 CRYBG1Q9Y4K1 1723 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms