RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 GGNBP2Q9H3C7 697 aa18.4■□□□□ 0.54
NUP85-215ENST00000580879 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
NUP85-215ENST00000580879 ONECUT3O60422 494 aaPredicted RBP18.39■□□□□ 0.53
NUP85-215ENST00000580879 UPF1Q92900 1129 aaKnown RBP eCLIP18.39■□□□□ 0.53
NUP85-215ENST00000580879 NSD3Q9BZ95 1437 aa18.39■□□□□ 0.53
NUP85-215ENST00000580879 COL18A1P39060 1754 aa18.38■□□□□ 0.53
NUP85-215ENST00000580879 FYB1O15117 783 aa18.38■□□□□ 0.53
NUP85-215ENST00000580879 FBLN1P23142 703 aa18.37■□□□□ 0.53
NUP85-215ENST00000580879 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
NUP85-215ENST00000580879 EP400Q96L91 3159 aa18.34■□□□□ 0.53
NUP85-215ENST00000580879 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
NUP85-215ENST00000580879 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
NUP85-215ENST00000580879 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
NUP85-215ENST00000580879 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
NUP85-215ENST00000580879 CRB1P82279 1406 aa18.33■□□□□ 0.53
NUP85-215ENST00000580879 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.53
NUP85-215ENST00000580879 PANK3Q9H999 370 aa18.33■□□□□ 0.52
NUP85-215ENST00000580879 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
NUP85-215ENST00000580879 WDR17Q8IZU2 1322 aa18.32■□□□□ 0.52
NUP85-215ENST00000580879 LTN1O94822 1766 aa18.32■□□□□ 0.52
NUP85-215ENST00000580879 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
NUP85-215ENST00000580879 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
NUP85-215ENST00000580879 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
NUP85-215ENST00000580879 RRS1Q15050 365 aaKnown RBP18.31■□□□□ 0.52
NUP85-215ENST00000580879 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
NUP85-215ENST00000580879 BARGINQ6ZT62 677 aa18.31■□□□□ 0.52
NUP85-215ENST00000580879 ABCC6O95255 1503 aa18.29■□□□□ 0.52
NUP85-215ENST00000580879 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
NUP85-215ENST00000580879 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
NUP85-215ENST00000580879 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
NUP85-215ENST00000580879 ERBB3P21860 1342 aa18.28■□□□□ 0.52
NUP85-215ENST00000580879 AMPHP49418 695 aa18.28■□□□□ 0.52
NUP85-215ENST00000580879 IP6K1Q92551 441 aa18.28■□□□□ 0.52
NUP85-215ENST00000580879 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
NUP85-215ENST00000580879 HOXC9P31274 260 aa18.27■□□□□ 0.52
NUP85-215ENST00000580879 CARD10Q9BWT7 1032 aa18.27■□□□□ 0.52
NUP85-215ENST00000580879 NLRP2Q9NX02 1062 aa18.27■□□□□ 0.52
NUP85-215ENST00000580879 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
NUP85-215ENST00000580879 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
NUP85-215ENST00000580879 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
NUP85-215ENST00000580879 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
NUP85-215ENST00000580879 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
NUP85-215ENST00000580879 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
NUP85-215ENST00000580879 RTL1A6NKG5 1358 aa18.21■□□□□ 0.51
NUP85-215ENST00000580879 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
NUP85-215ENST00000580879 DDB1Q16531 1140 aa18.21■□□□□ 0.51
NUP85-215ENST00000580879 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
NUP85-215ENST00000580879 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
NUP85-215ENST00000580879 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
NUP85-215ENST00000580879 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
NUP85-215ENST00000580879 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
NUP85-215ENST00000580879 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
NUP85-215ENST00000580879 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
NUP85-215ENST00000580879 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
NUP85-215ENST00000580879 WNK3Q9BYP7 1800 aa18.19■□□□□ 0.5
NUP85-215ENST00000580879 FLT4P35916 1363 aa18.18■□□□□ 0.5
NUP85-215ENST00000580879 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
NUP85-215ENST00000580879 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
NUP85-215ENST00000580879 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
NUP85-215ENST00000580879 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
NUP85-215ENST00000580879 NSD2O96028 1365 aa18.17■□□□□ 0.5
NUP85-215ENST00000580879 INSRP06213 1382 aa18.17■□□□□ 0.5
NUP85-215ENST00000580879 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
NUP85-215ENST00000580879 TRIM37O94972 964 aa18.16■□□□□ 0.5
NUP85-215ENST00000580879 IL2RBP14784 551 aa18.16■□□□□ 0.5
NUP85-215ENST00000580879 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
NUP85-215ENST00000580879 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
NUP85-215ENST00000580879 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
NUP85-215ENST00000580879 EXOC5O00471 708 aa18.15■□□□□ 0.5
NUP85-215ENST00000580879 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
NUP85-215ENST00000580879 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
NUP85-215ENST00000580879 MARCH10Q8NA82 808 aaPredicted RBP18.15■□□□□ 0.5
NUP85-215ENST00000580879 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
NUP85-215ENST00000580879 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
NUP85-215ENST00000580879 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
NUP85-215ENST00000580879 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
NUP85-215ENST00000580879 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.49
NUP85-215ENST00000580879 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
NUP85-215ENST00000580879 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
NUP85-215ENST00000580879 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
NUP85-215ENST00000580879 TNS2Q63HR2 1409 aa18.13■□□□□ 0.49
NUP85-215ENST00000580879 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
NUP85-215ENST00000580879 BAG6P46379 1132 aa18.1■□□□□ 0.49
NUP85-215ENST00000580879 EN1Q05925 392 aaPredicted RBP18.1■□□□□ 0.49
NUP85-215ENST00000580879 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
NUP85-215ENST00000580879 MEGF6O75095 1541 aa18.09■□□□□ 0.49
NUP85-215ENST00000580879 APBA3O96018 575 aa18.08■□□□□ 0.48
NUP85-215ENST00000580879 PTF1AQ7RTS3 328 aa18.08■□□□□ 0.48
NUP85-215ENST00000580879 TNS1Q9HBL0 1735 aaKnown RBP18.08■□□□□ 0.48
NUP85-215ENST00000580879 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
NUP85-215ENST00000580879 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
NUP85-215ENST00000580879 RAPGEF4Q8WZA2 1011 aa18.06■□□□□ 0.48
NUP85-215ENST00000580879 EYA1Q99502 592 aa18.06■□□□□ 0.48
NUP85-215ENST00000580879 EZH2Q15910 746 aaKnown RBP18.05■□□□□ 0.48
NUP85-215ENST00000580879 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
NUP85-215ENST00000580879 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
NUP85-215ENST00000580879 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
NUP85-215ENST00000580879 KCNQ2O43526 872 aa18.03■□□□□ 0.48
NUP85-215ENST00000580879 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
NUP85-215ENST00000580879 BCL9O00512 1426 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms