RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SPON1Q9HCB6 807 aa25.5■■□□□ 1.67
MKS1-209ENST00000580127 PPP1R1BQ9UD71 204 aaPredicted RBP25.5■■□□□ 1.67
MKS1-209ENST00000580127 CARD10Q9BWT7 1032 aa25.48■■□□□ 1.67
MKS1-209ENST00000580127 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
MKS1-209ENST00000580127 TRPM1Q7Z4N2 1603 aa25.48■■□□□ 1.67
MKS1-209ENST00000580127 EXOC5O00471 708 aa25.47■■□□□ 1.67
MKS1-209ENST00000580127 SOX12O15370 315 aa25.47■■□□□ 1.67
MKS1-209ENST00000580127 KTN1Q86UP2 1357 aaKnown RBP25.46■■□□□ 1.67
MKS1-209ENST00000580127 RREB1Q92766 1687 aa25.45■■□□□ 1.67
MKS1-209ENST00000580127 KCNQ2O43526 872 aa25.45■■□□□ 1.66
MKS1-209ENST00000580127 CPSF1Q10570 1443 aaKnown RBP25.45■■□□□ 1.66
MKS1-209ENST00000580127 NUP188Q5SRE5 1749 aa25.43■■□□□ 1.66
MKS1-209ENST00000580127 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
MKS1-209ENST00000580127 COL18A1P39060 1754 aa25.41■■□□□ 1.66
MKS1-209ENST00000580127 MARCH10Q8NA82 808 aaPredicted RBP25.41■■□□□ 1.66
MKS1-209ENST00000580127 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
MKS1-209ENST00000580127 CARD11Q9BXL7 1154 aa25.4■■□□□ 1.66
MKS1-209ENST00000580127 CCDC7Q96M83 1385 aa25.4■■□□□ 1.66
MKS1-209ENST00000580127 AKAP12Q02952 1782 aa25.39■■□□□ 1.66
MKS1-209ENST00000580127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.66
MKS1-209ENST00000580127 TMC1Q8TDI8 760 aa25.39■■□□□ 1.66
MKS1-209ENST00000580127 SBF2Q86WG5 1849 aa25.39■■□□□ 1.65
MKS1-209ENST00000580127 BCL9O00512 1426 aa25.37■■□□□ 1.65
MKS1-209ENST00000580127 PEAK1Q9H792 1746 aa25.37■■□□□ 1.65
MKS1-209ENST00000580127 TERF2IPQ9NYB0 399 aa25.36■■□□□ 1.65
MKS1-209ENST00000580127 LRRC37A3O60309 1634 aa25.36■■□□□ 1.65
MKS1-209ENST00000580127 RGPD3A6NKT7 1758 aaPredicted RBP25.36■■□□□ 1.65
MKS1-209ENST00000580127 RGPD4Q7Z3J3 1758 aa25.36■■□□□ 1.65
MKS1-209ENST00000580127 RGPD5Q99666 1765 aa25.36■■□□□ 1.65
MKS1-209ENST00000580127 SBNO2Q9Y2G9 1366 aa25.35■■□□□ 1.65
MKS1-209ENST00000580127 NLRP2Q9NX02 1062 aa25.35■■□□□ 1.65
MKS1-209ENST00000580127 STK32BQ9NY57 414 aa25.34■■□□□ 1.65
MKS1-209ENST00000580127 SLC24A1O60721 1099 aa25.33■■□□□ 1.65
MKS1-209ENST00000580127 USP31Q70CQ4 1352 aa25.32■■□□□ 1.64
MKS1-209ENST00000580127 ABCC6O95255 1503 aa25.32■■□□□ 1.64
MKS1-209ENST00000580127 NINLQ9Y2I6 1382 aa25.31■■□□□ 1.64
MKS1-209ENST00000580127 YY1P25490 414 aa25.31■■□□□ 1.64
MKS1-209ENST00000580127 TXNRD1Q16881 649 aa25.31■■□□□ 1.64
MKS1-209ENST00000580127 PUS7Q96PZ0 661 aaKnown RBP25.31■■□□□ 1.64
MKS1-209ENST00000580127 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
MKS1-209ENST00000580127 PROM2Q8N271 834 aa25.3■■□□□ 1.64
MKS1-209ENST00000580127 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
MKS1-209ENST00000580127 NME9Q86XW9 330 aa25.29■■□□□ 1.64
MKS1-209ENST00000580127 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
MKS1-209ENST00000580127 NFAT5O94916 1531 aa25.28■■□□□ 1.64
MKS1-209ENST00000580127 IL2RBP14784 551 aa25.28■■□□□ 1.64
MKS1-209ENST00000580127 TONSLQ96HA7 1378 aa25.28■■□□□ 1.64
MKS1-209ENST00000580127 KAT6BQ8WYB5 2073 aa25.27■■□□□ 1.64
MKS1-209ENST00000580127 MON2Q7Z3U7 1717 aa25.26■■□□□ 1.63
MKS1-209ENST00000580127 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
MKS1-209ENST00000580127 ERBB3P21860 1342 aa25.26■■□□□ 1.63
MKS1-209ENST00000580127 SLC15A2Q16348 729 aa25.25■■□□□ 1.63
MKS1-209ENST00000580127 ANKRD24Q8TF21 1146 aa25.25■■□□□ 1.63
MKS1-209ENST00000580127 EDC4Q6P2E9 1401 aaKnown RBP25.24■■□□□ 1.63
MKS1-209ENST00000580127 TNS2Q63HR2 1409 aa25.23■■□□□ 1.63
MKS1-209ENST00000580127 ZBTB7AO95365 584 aa25.23■■□□□ 1.63
MKS1-209ENST00000580127 ACSBG1Q96GR2 724 aa25.21■■□□□ 1.63
MKS1-209ENST00000580127 ATF5Q9Y2D1 282 aaPredicted RBP25.21■■□□□ 1.63
MKS1-209ENST00000580127 IP6K1Q92551 441 aa25.2■■□□□ 1.62
MKS1-209ENST00000580127 MTFR1LQ9H019 292 aa25.19■■□□□ 1.62
MKS1-209ENST00000580127 LTN1O94822 1766 aa25.18■■□□□ 1.62
MKS1-209ENST00000580127 COG3Q96JB2 828 aa25.18■■□□□ 1.62
MKS1-209ENST00000580127 USP54Q70EL1 1684 aa25.17■■□□□ 1.62
MKS1-209ENST00000580127 CD163L1Q9NR16 1453 aa25.17■■□□□ 1.62
MKS1-209ENST00000580127 PDGFDQ9GZP0 370 aaPredicted RBP25.17■■□□□ 1.62
MKS1-209ENST00000580127 DDX54Q8TDD1 881 aaKnown RBP25.15■■□□□ 1.62
MKS1-209ENST00000580127 CASZ1Q86V15 1759 aa25.15■■□□□ 1.62
MKS1-209ENST00000580127 A0A1W2PP64 1363 aa25.15■■□□□ 1.62
MKS1-209ENST00000580127 PTGER2P43116 358 aa25.14■■□□□ 1.62
MKS1-209ENST00000580127 AMPHP49418 695 aa25.14■■□□□ 1.62
MKS1-209ENST00000580127 LTV1Q96GA3 475 aaPredicted RBP25.14■■□□□ 1.62
MKS1-209ENST00000580127 NHSQ6T4R5 1651 aa25.13■■□□□ 1.61
MKS1-209ENST00000580127 ST20-MTHFSA0A0A6YYL1 179 aa25.12■■□□□ 1.61
MKS1-209ENST00000580127 SLC27A3Q5K4L6 730 aa25.11■■□□□ 1.61
MKS1-209ENST00000580127 SYT17Q9BSW7 474 aa25.1■■□□□ 1.61
MKS1-209ENST00000580127 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
MKS1-209ENST00000580127 ARXQ96QS3 562 aa25.08■■□□□ 1.61
MKS1-209ENST00000580127 HMGB2P26583 209 aaKnown RBP25.07■■□□□ 1.6
MKS1-209ENST00000580127 SLC16A10Q8TF71 515 aa25.07■■□□□ 1.6
MKS1-209ENST00000580127 SYTL4Q96C24 671 aaPredicted RBP25.07■■□□□ 1.6
MKS1-209ENST00000580127 TESK2Q96S53 571 aa25.07■■□□□ 1.6
MKS1-209ENST00000580127 HOXC9P31274 260 aa25.06■■□□□ 1.6
MKS1-209ENST00000580127 ZCRB1Q8TBF4 217 aaKnown RBP25.06■■□□□ 1.6
MKS1-209ENST00000580127 BTAF1O14981 1849 aa25.05■■□□□ 1.6
MKS1-209ENST00000580127 FAM208AQ9UK61 1670 aaKnown RBP25.05■■□□□ 1.6
MKS1-209ENST00000580127 TMF1P82094 1093 aa25.05■■□□□ 1.6
MKS1-209ENST00000580127 CDCA8Q53HL2 280 aa25.05■■□□□ 1.6
MKS1-209ENST00000580127 MAP3K19Q56UN5 1328 aa25.05■■□□□ 1.6
MKS1-209ENST00000580127 POLD1P28340 1107 aa25.03■■□□□ 1.6
MKS1-209ENST00000580127 PRIM1P49642 420 aaKnown RBP25.03■■□□□ 1.6
MKS1-209ENST00000580127 MYOM1P52179 1685 aa25.02■■□□□ 1.6
MKS1-209ENST00000580127 SGIP1Q9BQI5 828 aa25.02■■□□□ 1.6
MKS1-209ENST00000580127 LRRC4BQ9NT99 713 aa25.02■■□□□ 1.6
MKS1-209ENST00000580127 TFCP2L1Q9NZI6 479 aa25.02■■□□□ 1.6
MKS1-209ENST00000580127 CGNL1Q0VF96 1302 aa25.01■■□□□ 1.59
MKS1-209ENST00000580127 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
MKS1-209ENST00000580127 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
MKS1-209ENST00000580127 ZNF827Q17R98 1081 aa24.99■■□□□ 1.59
MKS1-209ENST00000580127 AKT1S1Q96B36 256 aa24.99■■□□□ 1.59
MKS1-209ENST00000580127 SMG6Q86US8 1419 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms