RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 POLKQ9UBT6 870 aa11.46□□□□□ -0.57
PPP4R1-213ENST00000579609 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-213ENST00000579609 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
PPP4R1-213ENST00000579609 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
PPP4R1-213ENST00000579609 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-213ENST00000579609 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
PPP4R1-213ENST00000579609 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
PPP4R1-213ENST00000579609 NWD1Q149M9 1564 aa11.43□□□□□ -0.58
PPP4R1-213ENST00000579609 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-213ENST00000579609 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 ALDH1L2Q3SY69 923 aa11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
PPP4R1-213ENST00000579609 DLG5Q8TDM6 1919 aa11.41□□□□□ -0.58
PPP4R1-213ENST00000579609 U2SURPO15042 1029 aaKnown RBP11.41□□□□□ -0.58
PPP4R1-213ENST00000579609 IL13P35225 146 aa11.41□□□□□ -0.58
PPP4R1-213ENST00000579609 KIF16BQ96L93 1317 aa11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 PLIN1O60240 522 aa11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
PPP4R1-213ENST00000579609 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
PPP4R1-213ENST00000579609 ACEP12821 1306 aa11.39□□□□□ -0.59
PPP4R1-213ENST00000579609 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
PPP4R1-213ENST00000579609 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
PPP4R1-213ENST00000579609 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-213ENST00000579609 ARHGEF10O15013 1369 aa11.39□□□□□ -0.59
PPP4R1-213ENST00000579609 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 CANXP27824 592 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 RIPK4P57078 832 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 GNAI1P63096 354 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 ANKLE2Q86XL3 938 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 NME9Q86XW9 330 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 IFT57Q9NWB7 429 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 RGPD8O14715 1765 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 RTL1A6NKG5 1358 aa11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-213ENST00000579609 ADGRL3Q9HAR2 1447 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 BCAR3O75815 825 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 ZKSCAN2Q63HK3 967 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 FLT4P35916 1363 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
PPP4R1-213ENST00000579609 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
PPP4R1-213ENST00000579609 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
PPP4R1-213ENST00000579609 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-213ENST00000579609 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-213ENST00000579609 KDRP35968 1356 aa11.36□□□□□ -0.59
PPP4R1-213ENST00000579609 ZNF853P0CG23 659 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 SLC26A8Q96RN1 970 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 BACH2Q9BYV9 841 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 EMILIN1Q9Y6C2 1016 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
PPP4R1-213ENST00000579609 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 NPHP4O75161 1426 aaPredicted RBP11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 MST1RQ04912 1400 aa11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
PPP4R1-213ENST00000579609 KIAA0232Q92628 1395 aa11.33□□□□□ -0.6
PPP4R1-213ENST00000579609 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
PPP4R1-213ENST00000579609 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
PPP4R1-213ENST00000579609 RGL2O15211 777 aa11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 PDE4AP27815 886 aa11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
PPP4R1-213ENST00000579609 PLEKHG2Q9H7P9 1386 aa11.31□□□□□ -0.6
PPP4R1-213ENST00000579609 ATF7IPQ6VMQ6 1270 aa11.31□□□□□ -0.6
PPP4R1-213ENST00000579609 ANP32EQ9BTT0 268 aa11.31□□□□□ -0.6
PPP4R1-213ENST00000579609 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
PPP4R1-213ENST00000579609 DCCP43146 1447 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 KCNA6P17658 529 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 FTSJ3Q8IY81 847 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 NGDNQ8NEJ9 315 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 BABAM1Q9NWV8 329 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
PPP4R1-213ENST00000579609 LTN1O94822 1766 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms