RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
CDK5RAP3-212ENST00000579175 MARCH10Q8NA82 808 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-212ENST00000579175 L3MBTL2Q969R5 705 aa18.07■□□□□ 0.48
CDK5RAP3-212ENST00000579175 EXOC5O00471 708 aa18.06■□□□□ 0.48
CDK5RAP3-212ENST00000579175 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
CDK5RAP3-212ENST00000579175 SLIT3O75094 1523 aa18.05■□□□□ 0.48
CDK5RAP3-212ENST00000579175 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-212ENST00000579175 ZBTB7AO95365 584 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 ARHGEF25Q86VW2 580 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
CDK5RAP3-212ENST00000579175 SBF2Q86WG5 1849 aa18.03■□□□□ 0.48
CDK5RAP3-212ENST00000579175 CARD10Q9BWT7 1032 aa18.03■□□□□ 0.48
CDK5RAP3-212ENST00000579175 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
CDK5RAP3-212ENST00000579175 PROM2Q8N271 834 aa18.02■□□□□ 0.48
CDK5RAP3-212ENST00000579175 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-212ENST00000579175 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
CDK5RAP3-212ENST00000579175 ROCK2O75116 1388 aaKnown RBP18.02■□□□□ 0.47
CDK5RAP3-212ENST00000579175 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 TXNRD1Q16881 649 aa18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 COL18A1P39060 1754 aa18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 KTN1Q86UP2 1357 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-212ENST00000579175 RGPD5Q99666 1765 aa18■□□□□ 0.47
CDK5RAP3-212ENST00000579175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
CDK5RAP3-212ENST00000579175 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
CDK5RAP3-212ENST00000579175 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
CDK5RAP3-212ENST00000579175 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-212ENST00000579175 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
CDK5RAP3-212ENST00000579175 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
CDK5RAP3-212ENST00000579175 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
CDK5RAP3-212ENST00000579175 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
CDK5RAP3-212ENST00000579175 SLC15A2Q16348 729 aa17.97■□□□□ 0.47
CDK5RAP3-212ENST00000579175 WNK3Q9BYP7 1800 aa17.96■□□□□ 0.47
CDK5RAP3-212ENST00000579175 TMC1Q8TDI8 760 aa17.96■□□□□ 0.47
CDK5RAP3-212ENST00000579175 BCL9O00512 1426 aa17.95■□□□□ 0.46
CDK5RAP3-212ENST00000579175 PTGER2P43116 358 aa17.93■□□□□ 0.46
CDK5RAP3-212ENST00000579175 KAT6BQ8WYB5 2073 aa17.93■□□□□ 0.46
CDK5RAP3-212ENST00000579175 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
CDK5RAP3-212ENST00000579175 IL2RBP14784 551 aa17.92■□□□□ 0.46
CDK5RAP3-212ENST00000579175 HDGFL2Q7Z4V5 671 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-212ENST00000579175 NME9Q86XW9 330 aa17.92■□□□□ 0.46
CDK5RAP3-212ENST00000579175 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-212ENST00000579175 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
CDK5RAP3-212ENST00000579175 TRIM26Q12899 539 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-212ENST00000579175 SYT17Q9BSW7 474 aa17.91■□□□□ 0.46
CDK5RAP3-212ENST00000579175 NFAT5O94916 1531 aa17.91■□□□□ 0.46
CDK5RAP3-212ENST00000579175 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
CDK5RAP3-212ENST00000579175 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
CDK5RAP3-212ENST00000579175 CARD11Q9BXL7 1154 aa17.9■□□□□ 0.46
CDK5RAP3-212ENST00000579175 ERBB3P21860 1342 aa17.9■□□□□ 0.46
CDK5RAP3-212ENST00000579175 MYOM1P52179 1685 aa17.89■□□□□ 0.45
CDK5RAP3-212ENST00000579175 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
CDK5RAP3-212ENST00000579175 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-212ENST00000579175 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-212ENST00000579175 ARXQ96QS3 562 aa17.87■□□□□ 0.45
CDK5RAP3-212ENST00000579175 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
CDK5RAP3-212ENST00000579175 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
CDK5RAP3-212ENST00000579175 USP31Q70CQ4 1352 aa17.86■□□□□ 0.45
CDK5RAP3-212ENST00000579175 ABCC6O95255 1503 aa17.86■□□□□ 0.45
CDK5RAP3-212ENST00000579175 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-212ENST00000579175 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
CDK5RAP3-212ENST00000579175 NHSQ6T4R5 1651 aa17.84■□□□□ 0.45
CDK5RAP3-212ENST00000579175 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-212ENST00000579175 LTN1O94822 1766 aa17.84■□□□□ 0.45
CDK5RAP3-212ENST00000579175 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
CDK5RAP3-212ENST00000579175 GPR162Q16538 588 aa17.83■□□□□ 0.44
CDK5RAP3-212ENST00000579175 ZNF827Q17R98 1081 aa17.82■□□□□ 0.44
CDK5RAP3-212ENST00000579175 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
CDK5RAP3-212ENST00000579175 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-212ENST00000579175 LRRC4BQ9NT99 713 aa17.81■□□□□ 0.44
CDK5RAP3-212ENST00000579175 BTAF1O14981 1849 aa17.81■□□□□ 0.44
CDK5RAP3-212ENST00000579175 EDC4Q6P2E9 1401 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-212ENST00000579175 POLD1P28340 1107 aa17.8■□□□□ 0.44
CDK5RAP3-212ENST00000579175 IP6K1Q92551 441 aa17.8■□□□□ 0.44
CDK5RAP3-212ENST00000579175 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
CDK5RAP3-212ENST00000579175 TFCP2L1Q9NZI6 479 aa17.8■□□□□ 0.44
CDK5RAP3-212ENST00000579175 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
CDK5RAP3-212ENST00000579175 AMPHP49418 695 aa17.79■□□□□ 0.44
CDK5RAP3-212ENST00000579175 SLC27A3Q5K4L6 730 aa17.79■□□□□ 0.44
CDK5RAP3-212ENST00000579175 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-212ENST00000579175 KCNQ4P56696 695 aa17.78■□□□□ 0.44
CDK5RAP3-212ENST00000579175 COG3Q96JB2 828 aa17.78■□□□□ 0.44
CDK5RAP3-212ENST00000579175 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
CDK5RAP3-212ENST00000579175 MSH5O43196 834 aa17.77■□□□□ 0.44
CDK5RAP3-212ENST00000579175 SLC16A10Q8TF71 515 aa17.77■□□□□ 0.44
CDK5RAP3-212ENST00000579175 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
CDK5RAP3-212ENST00000579175 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
CDK5RAP3-212ENST00000579175 CHD4Q14839 1912 aa17.76■□□□□ 0.43
CDK5RAP3-212ENST00000579175 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
CDK5RAP3-212ENST00000579175 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
CDK5RAP3-212ENST00000579175 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-212ENST00000579175 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
CDK5RAP3-212ENST00000579175 FBLN1P23142 703 aa17.74■□□□□ 0.43
CDK5RAP3-212ENST00000579175 PUS7Q96PZ0 661 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-212ENST00000579175 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms