RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 DCCP43146 1447 aa26.47■■□□□ 1.83
SMG8-203ENST00000578922 PNNQ9H307 717 aaKnown RBP26.46■■□□□ 1.83
SMG8-203ENST00000578922 TMPOP42166 694 aaKnown RBP26.46■■□□□ 1.83
SMG8-203ENST00000578922 XIRP1Q702N8 1843 aaKnown RBP26.45■■□□□ 1.83
SMG8-203ENST00000578922 SBNO1A3KN83 1393 aa26.43■■□□□ 1.82
SMG8-203ENST00000578922 E9PSI1 815 aa26.43■■□□□ 1.82
SMG8-203ENST00000578922 PHACTR3Q96KR7 559 aa26.43■■□□□ 1.82
SMG8-203ENST00000578922 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
SMG8-203ENST00000578922 FLT4P35916 1363 aa26.42■■□□□ 1.82
SMG8-203ENST00000578922 KIF1AQ12756 1690 aa26.42■■□□□ 1.82
SMG8-203ENST00000578922 NEFMP07197 916 aa26.42■■□□□ 1.82
SMG8-203ENST00000578922 RIPK4P57078 832 aa26.41■■□□□ 1.82
SMG8-203ENST00000578922 AEBP1Q8IUX7 1158 aa26.41■■□□□ 1.82
SMG8-203ENST00000578922 TRMT2AQ8IZ69 625 aaKnown RBP26.41■■□□□ 1.82
SMG8-203ENST00000578922 ZBTB7CA1YPR0 619 aa26.41■■□□□ 1.82
SMG8-203ENST00000578922 CCDC27Q2M243 656 aa26.41■■□□□ 1.82
SMG8-203ENST00000578922 B4GALNT3Q6L9W6 998 aa26.41■■□□□ 1.82
SMG8-203ENST00000578922 USP54Q70EL1 1684 aa26.4■■□□□ 1.82
SMG8-203ENST00000578922 SULT6B1Q6IMI4 303 aa26.4■■□□□ 1.82
SMG8-203ENST00000578922 TRIM35Q9UPQ4 493 aa26.39■■□□□ 1.81
SMG8-203ENST00000578922 WDR63Q8IWG1 891 aa26.38■■□□□ 1.81
SMG8-203ENST00000578922 HOXC9P31274 260 aa26.37■■□□□ 1.81
SMG8-203ENST00000578922 RRP1P56182 461 aaKnown RBP26.37■■□□□ 1.81
SMG8-203ENST00000578922 LTV1Q96GA3 475 aaPredicted RBP26.36■■□□□ 1.81
SMG8-203ENST00000578922 TRPM3Q9HCF6 1732 aaPredicted RBP26.36■■□□□ 1.81
SMG8-203ENST00000578922 MSH5O43196 834 aa26.36■■□□□ 1.81
SMG8-203ENST00000578922 NFE2L2Q16236 605 aa26.33■■□□□ 1.81
SMG8-203ENST00000578922 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.81
SMG8-203ENST00000578922 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
SMG8-203ENST00000578922 NFAT5O94916 1531 aa26.33■■□□□ 1.81
SMG8-203ENST00000578922 PLIN1O60240 522 aa26.33■■□□□ 1.81
SMG8-203ENST00000578922 GCP02774 474 aa26.33■■□□□ 1.81
SMG8-203ENST00000578922 BRINP3Q76B58 766 aa26.32■■□□□ 1.8
SMG8-203ENST00000578922 NPHP3Q7Z494 1330 aa26.32■■□□□ 1.8
SMG8-203ENST00000578922 LTN1O94822 1766 aa26.31■■□□□ 1.8
SMG8-203ENST00000578922 EYA1Q99502 592 aa26.31■■□□□ 1.8
SMG8-203ENST00000578922 SLAIN2Q9P270 581 aa26.31■■□□□ 1.8
SMG8-203ENST00000578922 RGPD1P0DJD0 1748 aa26.29■■□□□ 1.8
SMG8-203ENST00000578922 TSR2Q969E8 191 aaKnown RBP26.29■■□□□ 1.8
SMG8-203ENST00000578922 KIF24Q5T7B8 1368 aa26.28■■□□□ 1.8
SMG8-203ENST00000578922 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
SMG8-203ENST00000578922 ARHGEF10O15013 1369 aa26.28■■□□□ 1.8
SMG8-203ENST00000578922 IP6K1Q92551 441 aa26.27■■□□□ 1.8
SMG8-203ENST00000578922 MYH16Q9H6N6 1097 aa26.27■■□□□ 1.8
SMG8-203ENST00000578922 USP19O94966 1318 aa26.26■■□□□ 1.79
SMG8-203ENST00000578922 SLIT3O75094 1523 aa26.26■■□□□ 1.79
SMG8-203ENST00000578922 RTL1A6NKG5 1358 aa26.25■■□□□ 1.79
SMG8-203ENST00000578922 ALS2Q96Q42 1657 aa26.25■■□□□ 1.79
SMG8-203ENST00000578922 IGSF1Q8N6C5 1336 aa26.25■■□□□ 1.79
SMG8-203ENST00000578922 CCDC136Q96JN2 1154 aa26.24■■□□□ 1.79
SMG8-203ENST00000578922 ZC3H6P61129 1189 aaKnown RBP26.24■■□□□ 1.79
SMG8-203ENST00000578922 CABLES1Q8TDN4 633 aa26.24■■□□□ 1.79
SMG8-203ENST00000578922 PXDNQ92626 1479 aa26.23■■□□□ 1.79
SMG8-203ENST00000578922 FAM83GA6ND36 823 aa26.23■■□□□ 1.79
SMG8-203ENST00000578922 ARHGEF25Q86VW2 580 aa26.23■■□□□ 1.79
SMG8-203ENST00000578922 USHBP1Q8N6Y0 703 aa26.23■■□□□ 1.79
SMG8-203ENST00000578922 LAS1LQ9Y4W2 734 aaKnown RBP26.23■■□□□ 1.79
SMG8-203ENST00000578922 BCAR3O75815 825 aa26.22■■□□□ 1.79
SMG8-203ENST00000578922 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
SMG8-203ENST00000578922 ERICH6Q7L0X2 663 aa26.22■■□□□ 1.79
SMG8-203ENST00000578922 TNS3Q68CZ2 1445 aa26.21■■□□□ 1.79
SMG8-203ENST00000578922 MED1Q15648 1581 aaPredicted RBP26.21■■□□□ 1.79
SMG8-203ENST00000578922 DLG5Q8TDM6 1919 aa26.2■■□□□ 1.79
SMG8-203ENST00000578922 IL16Q14005 1332 aa26.2■■□□□ 1.78
SMG8-203ENST00000578922 SPATA31A3Q5VYP0 1347 aa26.2■■□□□ 1.78
SMG8-203ENST00000578922 KDRP35968 1356 aa26.19■■□□□ 1.78
SMG8-203ENST00000578922 EXOSC9Q06265 439 aaKnown RBP26.17■■□□□ 1.78
SMG8-203ENST00000578922 LMOD3Q0VAK6 560 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 C20orf194Q5TEA3 1177 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 EXOC6Q8TAG9 804 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 LRRC59Q96AG4 307 aaKnown RBP26.17■■□□□ 1.78
SMG8-203ENST00000578922 MTHFSDQ2M296 383 aaKnown RBP26.17■■□□□ 1.78
SMG8-203ENST00000578922 NBPF6Q5VWK0 638 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 NBPF4Q96M43 638 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 AXIN2Q9Y2T1 843 aa26.17■■□□□ 1.78
SMG8-203ENST00000578922 MCM10Q7L590 875 aa26.14■■□□□ 1.78
SMG8-203ENST00000578922 BCL2L13Q9BXK5 485 aa26.14■■□□□ 1.78
SMG8-203ENST00000578922 ANKRD24Q8TF21 1146 aa26.13■■□□□ 1.77
SMG8-203ENST00000578922 PHRF1Q9P1Y6 1649 aaKnown RBP26.13■■□□□ 1.77
SMG8-203ENST00000578922 RARSP54136 660 aaKnown RBP26.13■■□□□ 1.77
SMG8-203ENST00000578922 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
SMG8-203ENST00000578922 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.12■■□□□ 1.77
SMG8-203ENST00000578922 SOS2Q07890 1332 aaPredicted RBP26.12■■□□□ 1.77
SMG8-203ENST00000578922 CRBNQ96SW2 442 aa26.12■■□□□ 1.77
SMG8-203ENST00000578922 CHRNA2Q15822 529 aa26.1■■□□□ 1.77
SMG8-203ENST00000578922 RGPD2P0DJD1 1756 aa26.1■■□□□ 1.77
SMG8-203ENST00000578922 GNAI1P63096 354 aa26.09■■□□□ 1.77
SMG8-203ENST00000578922 FRAT1Q92837 279 aaPredicted RBP26.09■■□□□ 1.77
SMG8-203ENST00000578922 IFT57Q9NWB7 429 aa26.09■■□□□ 1.77
SMG8-203ENST00000578922 CANXP27824 592 aaKnown RBP26.08■■□□□ 1.77
SMG8-203ENST00000578922 GAS2L2Q8NHY3 880 aa26.08■■□□□ 1.77
SMG8-203ENST00000578922 MBIPQ9NS73 344 aa26.08■■□□□ 1.77
SMG8-203ENST00000578922 RGPD5Q99666 1765 aa26.07■■□□□ 1.76
SMG8-203ENST00000578922 ZNF853P0CG23 659 aa26.06■■□□□ 1.76
SMG8-203ENST00000578922 RTF1Q92541 710 aaKnown RBP26.06■■□□□ 1.76
SMG8-203ENST00000578922 CFAP44Q96MT7 982 aa26.06■■□□□ 1.76
SMG8-203ENST00000578922 KIAA0232Q92628 1395 aa26.05■■□□□ 1.76
SMG8-203ENST00000578922 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
SMG8-203ENST00000578922 HAP1P54257 671 aaPredicted RBP26.04■■□□□ 1.76
SMG8-203ENST00000578922 ERBB3P21860 1342 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms