RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 HDGFL2Q7Z4V5 671 aaPredicted RBP32.25■■■□□ 2.75
CDKN2A-212ENST00000578845 TMC1Q8TDI8 760 aa32.25■■■□□ 2.75
CDKN2A-212ENST00000578845 SLC12A5Q9H2X9 1139 aa32.25■■■□□ 2.75
CDKN2A-212ENST00000578845 NINLQ9Y2I6 1382 aa32.24■■■□□ 2.75
CDKN2A-212ENST00000578845 ST20-MTHFSA0A0A6YYL1 179 aa32.24■■■□□ 2.75
CDKN2A-212ENST00000578845 SLC24A1O60721 1099 aa32.24■■■□□ 2.75
CDKN2A-212ENST00000578845 A0A1W2PP64 1363 aa32.23■■■□□ 2.75
CDKN2A-212ENST00000578845 TRIM37O94972 964 aa32.23■■■□□ 2.75
CDKN2A-212ENST00000578845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.23■■■□□ 2.75
CDKN2A-212ENST00000578845 TOM1L2Q6ZVM7 507 aa32.22■■■□□ 2.75
CDKN2A-212ENST00000578845 TERF2IPQ9NYB0 399 aa32.22■■■□□ 2.75
CDKN2A-212ENST00000578845 LRRC37A3O60309 1634 aa32.22■■■□□ 2.75
CDKN2A-212ENST00000578845 WNK3Q9BYP7 1800 aa32.21■■■□□ 2.75
CDKN2A-212ENST00000578845 PARD3Q8TEW0 1356 aa32.2■■■□□ 2.75
CDKN2A-212ENST00000578845 C11orf95C9JLR9 678 aaPredicted RBP32.2■■■□□ 2.75
CDKN2A-212ENST00000578845 SOX12O15370 315 aa32.2■■■□□ 2.75
CDKN2A-212ENST00000578845 NME9Q86XW9 330 aa32.2■■■□□ 2.75
CDKN2A-212ENST00000578845 CAMKK2Q96RR4 588 aa32.19■■■□□ 2.74
CDKN2A-212ENST00000578845 PEAK1Q9H792 1746 aa32.19■■■□□ 2.74
CDKN2A-212ENST00000578845 RGPD5Q99666 1765 aa32.19■■■□□ 2.74
CDKN2A-212ENST00000578845 CDCA7Q9BWT1 371 aaPredicted RBP32.17■■■□□ 2.74
CDKN2A-212ENST00000578845 CARD10Q9BWT7 1032 aa32.17■■■□□ 2.74
CDKN2A-212ENST00000578845 OVOS2A0A0G2JMS6 1433 aa32.17■■■□□ 2.74
CDKN2A-212ENST00000578845 OVOS2A0A0J9YW53 1432 aa32.17■■■□□ 2.74
CDKN2A-212ENST00000578845 OVOS2Q6IE36 1432 aa32.17■■■□□ 2.74
CDKN2A-212ENST00000578845 EZH2Q15910 746 aaKnown RBP32.15■■■□□ 2.74
CDKN2A-212ENST00000578845 APBA3O96018 575 aa32.14■■■□□ 2.74
CDKN2A-212ENST00000578845 DDB1Q16531 1140 aa32.14■■■□□ 2.74
CDKN2A-212ENST00000578845 LRP5O75197 1615 aa32.13■■■□□ 2.73
CDKN2A-212ENST00000578845 USP47Q96K76 1375 aa32.13■■■□□ 2.73
CDKN2A-212ENST00000578845 CLSPNQ9HAW4 1339 aa32.12■■■□□ 2.73
CDKN2A-212ENST00000578845 TIMELESSQ9UNS1 1208 aa32.12■■■□□ 2.73
CDKN2A-212ENST00000578845 RREB1Q92766 1687 aa32.11■■■□□ 2.73
CDKN2A-212ENST00000578845 CCDC7Q96M83 1385 aa32.11■■■□□ 2.73
CDKN2A-212ENST00000578845 CSB-PGBD3P0DP91 1061 aa32.11■■■□□ 2.73
CDKN2A-212ENST00000578845 BCL9O00512 1426 aa32.1■■■□□ 2.73
CDKN2A-212ENST00000578845 LTN1O94822 1766 aa32.09■■■□□ 2.73
CDKN2A-212ENST00000578845 ERBB3P21860 1342 aa32.09■■■□□ 2.73
CDKN2A-212ENST00000578845 PSDA5PKW4 1024 aaPredicted RBP32.09■■■□□ 2.73
CDKN2A-212ENST00000578845 ANKRD36BQ8N2N9 1353 aa32.07■■■□□ 2.72
CDKN2A-212ENST00000578845 TMF1P82094 1093 aa32.05■■■□□ 2.72
CDKN2A-212ENST00000578845 SBF2Q86WG5 1849 aa32.05■■■□□ 2.72
CDKN2A-212ENST00000578845 MARCH10Q8NA82 808 aaPredicted RBP32.04■■■□□ 2.72
CDKN2A-212ENST00000578845 NUP188Q5SRE5 1749 aa32.03■■■□□ 2.72
CDKN2A-212ENST00000578845 RGPD3A6NKT7 1758 aaPredicted RBP32.03■■■□□ 2.72
CDKN2A-212ENST00000578845 RGPD4Q7Z3J3 1758 aa32.03■■■□□ 2.72
CDKN2A-212ENST00000578845 TNS2Q63HR2 1409 aa32.02■■■□□ 2.72
CDKN2A-212ENST00000578845 R3HDM1Q15032 1099 aaKnown RBP32.02■■■□□ 2.72
CDKN2A-212ENST00000578845 EXOC5O00471 708 aa31.98■■■□□ 2.71
CDKN2A-212ENST00000578845 ANKRD24Q8TF21 1146 aa31.98■■■□□ 2.71
CDKN2A-212ENST00000578845 BCL11BQ9C0K0 894 aaPredicted RBP31.98■■■□□ 2.71
CDKN2A-212ENST00000578845 PLSCR1O15162 318 aa31.97■■■□□ 2.71
CDKN2A-212ENST00000578845 COG3Q96JB2 828 aa31.97■■■□□ 2.71
CDKN2A-212ENST00000578845 CDCA8Q53HL2 280 aa31.96■■■□□ 2.71
CDKN2A-212ENST00000578845 IP6K1Q92551 441 aa31.96■■■□□ 2.71
CDKN2A-212ENST00000578845 NLRP2Q9NX02 1062 aa31.96■■■□□ 2.71
CDKN2A-212ENST00000578845 FAM208AQ9UK61 1670 aaKnown RBP31.93■■■□□ 2.7
CDKN2A-212ENST00000578845 PCGF6Q9BYE7 350 aa31.93■■■□□ 2.7
CDKN2A-212ENST00000578845 IL2RBP14784 551 aa31.91■■■□□ 2.7
CDKN2A-212ENST00000578845 NBPF14Q5TI25 921 aa31.91■■■□□ 2.7
CDKN2A-212ENST00000578845 PTF1AQ7RTS3 328 aa31.91■■■□□ 2.7
CDKN2A-212ENST00000578845 MAP3K19Q56UN5 1328 aa31.91■■■□□ 2.7
CDKN2A-212ENST00000578845 FYB1O15117 783 aa31.89■■■□□ 2.7
CDKN2A-212ENST00000578845 MYOM1P52179 1685 aa31.88■■■□□ 2.69
CDKN2A-212ENST00000578845 RTL1A6NKG5 1358 aa31.87■■■□□ 2.69
CDKN2A-212ENST00000578845 HOXC9P31274 260 aa31.87■■■□□ 2.69
CDKN2A-212ENST00000578845 NHSQ6T4R5 1651 aa31.85■■■□□ 2.69
CDKN2A-212ENST00000578845 GGNBP2Q9H3C7 697 aa31.83■■■□□ 2.69
CDKN2A-212ENST00000578845 FBLN1P23142 703 aa31.82■■■□□ 2.68
CDKN2A-212ENST00000578845 KIF20BQ96Q89 1820 aa31.82■■■□□ 2.68
CDKN2A-212ENST00000578845 AMPHP49418 695 aa31.81■■■□□ 2.68
CDKN2A-212ENST00000578845 PROM2Q8N271 834 aa31.81■■■□□ 2.68
CDKN2A-212ENST00000578845 LTV1Q96GA3 475 aaPredicted RBP31.79■■■□□ 2.68
CDKN2A-212ENST00000578845 KCNQ2O43526 872 aa31.78■■■□□ 2.68
CDKN2A-212ENST00000578845 CARD14Q9BXL6 1004 aa31.77■■■□□ 2.68
CDKN2A-212ENST00000578845 RRS1Q15050 365 aaKnown RBP31.76■■■□□ 2.67
CDKN2A-212ENST00000578845 ANO8Q9HCE9 1232 aaPredicted RBP31.76■■■□□ 2.67
CDKN2A-212ENST00000578845 KIF24Q5T7B8 1368 aa31.76■■■□□ 2.67
CDKN2A-212ENST00000578845 NSD3Q9BZ95 1437 aa31.75■■■□□ 2.67
CDKN2A-212ENST00000578845 TXNRD1Q16881 649 aa31.74■■■□□ 2.67
CDKN2A-212ENST00000578845 ACSBG1Q96GR2 724 aa31.72■■■□□ 2.67
CDKN2A-212ENST00000578845 RGPD2P0DJD1 1756 aa31.71■■■□□ 2.67
CDKN2A-212ENST00000578845 INSRP06213 1382 aa31.7■■■□□ 2.67
CDKN2A-212ENST00000578845 FLT4P35916 1363 aa31.7■■■□□ 2.67
CDKN2A-212ENST00000578845 SMG6Q86US8 1419 aaKnown RBP31.7■■■□□ 2.67
CDKN2A-212ENST00000578845 CASZ1Q86V15 1759 aa31.7■■■□□ 2.67
CDKN2A-212ENST00000578845 MEGF6O75095 1541 aa31.7■■■□□ 2.66
CDKN2A-212ENST00000578845 BTAF1O14981 1849 aa31.68■■■□□ 2.66
CDKN2A-212ENST00000578845 CCER1Q8TC90 406 aaPredicted RBP31.68■■■□□ 2.66
CDKN2A-212ENST00000578845 SHANK3Q9BYB0 1731 aa31.67■■■□□ 2.66
CDKN2A-212ENST00000578845 NBPF6Q5VWK0 638 aa31.67■■■□□ 2.66
CDKN2A-212ENST00000578845 NBPF4Q96M43 638 aa31.67■■■□□ 2.66
CDKN2A-212ENST00000578845 SPON1Q9HCB6 807 aa31.66■■■□□ 2.66
CDKN2A-212ENST00000578845 EIF4G2P78344 907 aaKnown RBP eCLIP31.65■■■□□ 2.66
CDKN2A-212ENST00000578845 DDX54Q8TDD1 881 aaKnown RBP31.65■■■□□ 2.66
CDKN2A-212ENST00000578845 CGNL1Q0VF96 1302 aa31.65■■■□□ 2.66
CDKN2A-212ENST00000578845 PAPPAQ13219 1627 aa31.64■■■□□ 2.66
CDKN2A-212ENST00000578845 HSP90AB2PQ58FF8 381 aa31.64■■■□□ 2.66
CDKN2A-212ENST00000578845 ANKRD26Q9UPS8 1709 aa31.63■■■□□ 2.65
CDKN2A-212ENST00000578845 ZCRB1Q8TBF4 217 aaKnown RBP31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms