RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 TBX22Q9Y458 520 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 HMOX1P09601 288 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
BPTF-211ENST00000578307 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 ACEP12821 1306 aa12.32□□□□□ -0.44
BPTF-211ENST00000578307 IGHDP01880 384 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
BPTF-211ENST00000578307 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 FTSJ3Q8IY81 847 aaKnown RBP12.31□□□□□ -0.44
BPTF-211ENST00000578307 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 RLBP1P12271 317 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
BPTF-211ENST00000578307 RGS3P49796 1198 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 RRS1Q15050 365 aaKnown RBP12.31□□□□□ -0.44
BPTF-211ENST00000578307 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
BPTF-211ENST00000578307 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
BPTF-211ENST00000578307 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
BPTF-211ENST00000578307 DZIP1LQ8IYY4 767 aaKnown RBP12.3□□□□□ -0.44
BPTF-211ENST00000578307 TNNQ9UQP3 1299 aa12.3□□□□□ -0.44
BPTF-211ENST00000578307 USP6P35125 1406 aa12.3□□□□□ -0.44
BPTF-211ENST00000578307 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
BPTF-211ENST00000578307 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
BPTF-211ENST00000578307 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
BPTF-211ENST00000578307 NALCNQ8IZF0 1738 aa12.29□□□□□ -0.44
BPTF-211ENST00000578307 FGD1P98174 961 aa12.29□□□□□ -0.44
BPTF-211ENST00000578307 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
BPTF-211ENST00000578307 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
BPTF-211ENST00000578307 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
BPTF-211ENST00000578307 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
BPTF-211ENST00000578307 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
BPTF-211ENST00000578307 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
BPTF-211ENST00000578307 RIMS1Q86UR5 1692 aaKnown RBP12.28□□□□□ -0.44
BPTF-211ENST00000578307 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
BPTF-211ENST00000578307 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
BPTF-211ENST00000578307 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
BPTF-211ENST00000578307 KIF16BQ96L93 1317 aa12.27□□□□□ -0.44
BPTF-211ENST00000578307 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
BPTF-211ENST00000578307 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
BPTF-211ENST00000578307 LAS1LQ9Y4W2 734 aaKnown RBP12.27□□□□□ -0.45
BPTF-211ENST00000578307 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
BPTF-211ENST00000578307 IPO8O15397 1037 aaKnown RBP12.26□□□□□ -0.45
BPTF-211ENST00000578307 GNAI1P63096 354 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 PDE4CQ08493 712 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
BPTF-211ENST00000578307 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 TRIM27P14373 513 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
BPTF-211ENST00000578307 DDX19BQ9UMR2 479 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
BPTF-211ENST00000578307 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
BPTF-211ENST00000578307 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
BPTF-211ENST00000578307 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
BPTF-211ENST00000578307 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
BPTF-211ENST00000578307 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
BPTF-211ENST00000578307 ITPRIPQ8IWB1 547 aa12.24□□□□□ -0.45
BPTF-211ENST00000578307 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
BPTF-211ENST00000578307 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
BPTF-211ENST00000578307 PEAK1Q9H792 1746 aa12.24□□□□□ -0.45
BPTF-211ENST00000578307 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
BPTF-211ENST00000578307 ANKARQ7Z5J8 1434 aa12.22□□□□□ -0.45
BPTF-211ENST00000578307 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
BPTF-211ENST00000578307 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
BPTF-211ENST00000578307 BRPF1P55201 1214 aaPredicted RBP12.22□□□□□ -0.45
BPTF-211ENST00000578307 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
BPTF-211ENST00000578307 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
BPTF-211ENST00000578307 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
BPTF-211ENST00000578307 TMEM57Q8N5G2 664 aa12.21□□□□□ -0.45
BPTF-211ENST00000578307 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
BPTF-211ENST00000578307 VAMP4O75379 141 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 KCNA6P17658 529 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 PIK3C2AO00443 1686 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
BPTF-211ENST00000578307 CHD2O14647 1828 aaKnown RBP12.2□□□□□ -0.46
BPTF-211ENST00000578307 SOX12O15370 315 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
BPTF-211ENST00000578307 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
BPTF-211ENST00000578307 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
BPTF-211ENST00000578307 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 SBNO1A3KN83 1393 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 FLT4P35916 1363 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 GSE1Q14687 1217 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
BPTF-211ENST00000578307 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
BPTF-211ENST00000578307 CHMP4BQ9H444 224 aaKnown RBP12.19□□□□□ -0.46
BPTF-211ENST00000578307 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
BPTF-211ENST00000578307 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
BPTF-211ENST00000578307 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
BPTF-211ENST00000578307 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
BPTF-211ENST00000578307 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms