RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 NHSL1Q5SYE7 1610 aa24.47■■□□□ 1.51
PRKCA-203ENST00000578063 HOXC9P31274 260 aa24.47■■□□□ 1.51
PRKCA-203ENST00000578063 TCP11L2Q8N4U5 519 aa24.47■■□□□ 1.51
PRKCA-203ENST00000578063 RSPH6AQ9H0K4 717 aa24.47■■□□□ 1.51
PRKCA-203ENST00000578063 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
PRKCA-203ENST00000578063 LTN1O94822 1766 aa24.47■■□□□ 1.51
PRKCA-203ENST00000578063 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
PRKCA-203ENST00000578063 NEFMP07197 916 aa24.44■■□□□ 1.5
PRKCA-203ENST00000578063 IP6K1Q92551 441 aa24.44■■□□□ 1.5
PRKCA-203ENST00000578063 PRKAR2BP31323 418 aa24.43■■□□□ 1.5
PRKCA-203ENST00000578063 CCDC27Q2M243 656 aa24.42■■□□□ 1.5
PRKCA-203ENST00000578063 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
PRKCA-203ENST00000578063 HMOX1P09601 288 aa24.41■■□□□ 1.5
PRKCA-203ENST00000578063 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
PRKCA-203ENST00000578063 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
PRKCA-203ENST00000578063 GOLGA2Q08379 1002 aa24.4■■□□□ 1.5
PRKCA-203ENST00000578063 CRYBG1Q9Y4K1 1723 aa24.39■■□□□ 1.5
PRKCA-203ENST00000578063 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
PRKCA-203ENST00000578063 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
PRKCA-203ENST00000578063 RRP7AQ9Y3A4 280 aaKnown RBP24.38■■□□□ 1.49
PRKCA-203ENST00000578063 IGSF1Q8N6C5 1336 aa24.38■■□□□ 1.49
PRKCA-203ENST00000578063 TMPOP42166 694 aaKnown RBP24.38■■□□□ 1.49
PRKCA-203ENST00000578063 AHDC1Q5TGY3 1603 aaPredicted RBP24.37■■□□□ 1.49
PRKCA-203ENST00000578063 NEUROD2Q15784 382 aa24.37■■□□□ 1.49
PRKCA-203ENST00000578063 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
PRKCA-203ENST00000578063 CDCA7LQ96GN5 454 aa24.37■■□□□ 1.49
PRKCA-203ENST00000578063 KDRP35968 1356 aa24.37■■□□□ 1.49
PRKCA-203ENST00000578063 ABCC6O95255 1503 aa24.36■■□□□ 1.49
PRKCA-203ENST00000578063 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
PRKCA-203ENST00000578063 EYA1Q99502 592 aa24.35■■□□□ 1.49
PRKCA-203ENST00000578063 AEBP1Q8IUX7 1158 aa24.34■■□□□ 1.49
PRKCA-203ENST00000578063 WDR63Q8IWG1 891 aa24.34■■□□□ 1.49
PRKCA-203ENST00000578063 CPDO75976 1380 aa24.34■■□□□ 1.49
PRKCA-203ENST00000578063 E9PSI1 815 aa24.33■■□□□ 1.49
PRKCA-203ENST00000578063 TOM1O60784 492 aa24.33■■□□□ 1.49
PRKCA-203ENST00000578063 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
PRKCA-203ENST00000578063 NFE2L2Q16236 605 aa24.32■■□□□ 1.48
PRKCA-203ENST00000578063 SLFN5Q08AF3 891 aa24.32■■□□□ 1.48
PRKCA-203ENST00000578063 PHACTR3Q96KR7 559 aa24.32■■□□□ 1.48
PRKCA-203ENST00000578063 RIPK4P57078 832 aa24.31■■□□□ 1.48
PRKCA-203ENST00000578063 ZC3H6P61129 1189 aaKnown RBP24.31■■□□□ 1.48
PRKCA-203ENST00000578063 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
PRKCA-203ENST00000578063 LTV1Q96GA3 475 aaPredicted RBP24.31■■□□□ 1.48
PRKCA-203ENST00000578063 DUSP27Q5VZP5 1158 aa24.29■■□□□ 1.48
PRKCA-203ENST00000578063 TRMT2AQ8IZ69 625 aaKnown RBP24.29■■□□□ 1.48
PRKCA-203ENST00000578063 LRRC59Q96AG4 307 aaKnown RBP24.29■■□□□ 1.48
PRKCA-203ENST00000578063 TRIM35Q9UPQ4 493 aa24.29■■□□□ 1.48
PRKCA-203ENST00000578063 ABCA3Q99758 1704 aa24.28■■□□□ 1.48
PRKCA-203ENST00000578063 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
PRKCA-203ENST00000578063 KIAA0232Q92628 1395 aa24.27■■□□□ 1.48
PRKCA-203ENST00000578063 ANKRD24Q8TF21 1146 aa24.27■■□□□ 1.48
PRKCA-203ENST00000578063 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
PRKCA-203ENST00000578063 UBAP1LF5GYI3 381 aa24.26■■□□□ 1.47
PRKCA-203ENST00000578063 COL18A1P39060 1754 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
PRKCA-203ENST00000578063 PIP4K2BP78356 416 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 NCAPD2Q15021 1401 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 SPINK5Q9NQ38 1064 aaPredicted RBP24.25■■□□□ 1.47
PRKCA-203ENST00000578063 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 ERBB3P21860 1342 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 IL16Q14005 1332 aa24.25■■□□□ 1.47
PRKCA-203ENST00000578063 NEFLP07196 543 aa24.24■■□□□ 1.47
PRKCA-203ENST00000578063 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
PRKCA-203ENST00000578063 NBPF6Q5VWK0 638 aa24.23■■□□□ 1.47
PRKCA-203ENST00000578063 NBPF4Q96M43 638 aa24.23■■□□□ 1.47
PRKCA-203ENST00000578063 CALD1Q05682 793 aaKnown RBP24.22■■□□□ 1.47
PRKCA-203ENST00000578063 MYH16Q9H6N6 1097 aa24.22■■□□□ 1.47
PRKCA-203ENST00000578063 COL22A1Q8NFW1 1626 aaPredicted RBP24.22■■□□□ 1.47
PRKCA-203ENST00000578063 CERKQ8TCT0 537 aa24.21■■□□□ 1.47
PRKCA-203ENST00000578063 RCAN3Q9UKA8 241 aa24.21■■□□□ 1.47
PRKCA-203ENST00000578063 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
PRKCA-203ENST00000578063 GAS2L2Q8NHY3 880 aa24.21■■□□□ 1.47
PRKCA-203ENST00000578063 PRDM11Q9NQV5 511 aa24.21■■□□□ 1.47
PRKCA-203ENST00000578063 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
PRKCA-203ENST00000578063 LMO7Q8WWI1 1683 aa24.19■■□□□ 1.46
PRKCA-203ENST00000578063 FAM208AQ9UK61 1670 aaKnown RBP24.19■■□□□ 1.46
PRKCA-203ENST00000578063 USHBP1Q8N6Y0 703 aa24.19■■□□□ 1.46
PRKCA-203ENST00000578063 CHRNA2Q15822 529 aa24.18■■□□□ 1.46
PRKCA-203ENST00000578063 RGPD5Q99666 1765 aa24.18■■□□□ 1.46
PRKCA-203ENST00000578063 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
PRKCA-203ENST00000578063 DLG5Q8TDM6 1919 aa24.17■■□□□ 1.46
PRKCA-203ENST00000578063 RGPD2P0DJD1 1756 aa24.16■■□□□ 1.46
PRKCA-203ENST00000578063 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
PRKCA-203ENST00000578063 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
PRKCA-203ENST00000578063 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
PRKCA-203ENST00000578063 PLEKHG2Q9H7P9 1386 aa24.13■■□□□ 1.45
PRKCA-203ENST00000578063 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
PRKCA-203ENST00000578063 IFT57Q9NWB7 429 aa24.12■■□□□ 1.45
PRKCA-203ENST00000578063 NLRP2Q9NX02 1062 aa24.12■■□□□ 1.45
PRKCA-203ENST00000578063 COL5A2P05997 1499 aaPredicted RBP24.11■■□□□ 1.45
PRKCA-203ENST00000578063 FKBP8Q14318 412 aa24.11■■□□□ 1.45
PRKCA-203ENST00000578063 GNAI1P63096 354 aa24.1■■□□□ 1.45
PRKCA-203ENST00000578063 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
PRKCA-203ENST00000578063 RTF1Q92541 710 aaKnown RBP24.1■■□□□ 1.45
PRKCA-203ENST00000578063 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
PRKCA-203ENST00000578063 FAM83GA6ND36 823 aa24.1■■□□□ 1.45
PRKCA-203ENST00000578063 THUMPD2Q9BTF0 503 aaKnown RBP24.1■■□□□ 1.45
PRKCA-203ENST00000578063 MAP3K5Q99683 1374 aa24.09■■□□□ 1.45
PRKCA-203ENST00000578063 PLEKHO1Q53GL0 409 aaPredicted RBP24.09■■□□□ 1.45
PRKCA-203ENST00000578063 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms