RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-219ENST00000576713 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
NPLOC4-219ENST00000576713 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-219ENST00000576713 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
NPLOC4-219ENST00000576713 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
NPLOC4-219ENST00000576713 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
NPLOC4-219ENST00000576713 PHLPP1O60346 1717 aa13.5□□□□□ -0.25
NPLOC4-219ENST00000576713 CENPJQ9HC77 1338 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-219ENST00000576713 E2F4Q16254 413 aa13.49□□□□□ -0.25
NPLOC4-219ENST00000576713 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
NPLOC4-219ENST00000576713 ATP7BP35670 1465 aa13.48□□□□□ -0.25
NPLOC4-219ENST00000576713 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-219ENST00000576713 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
NPLOC4-219ENST00000576713 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
NPLOC4-219ENST00000576713 KIF3CO14782 793 aa13.46□□□□□ -0.25
NPLOC4-219ENST00000576713 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
NPLOC4-219ENST00000576713 PXDNQ92626 1479 aa13.46□□□□□ -0.25
NPLOC4-219ENST00000576713 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
NPLOC4-219ENST00000576713 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
NPLOC4-219ENST00000576713 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
NPLOC4-219ENST00000576713 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
NPLOC4-219ENST00000576713 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
NPLOC4-219ENST00000576713 ANKARQ7Z5J8 1434 aa13.45□□□□□ -0.26
NPLOC4-219ENST00000576713 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
NPLOC4-219ENST00000576713 DSG2Q14126 1118 aa13.44□□□□□ -0.26
NPLOC4-219ENST00000576713 NBR1Q14596 966 aa13.44□□□□□ -0.26
NPLOC4-219ENST00000576713 FOXO3O43524 673 aa13.43□□□□□ -0.26
NPLOC4-219ENST00000576713 FOXK1P85037 733 aa13.43□□□□□ -0.26
NPLOC4-219ENST00000576713 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
NPLOC4-219ENST00000576713 TESK2Q96S53 571 aa13.43□□□□□ -0.26
NPLOC4-219ENST00000576713 CAMK2BQ13554 666 aa13.42□□□□□ -0.26
NPLOC4-219ENST00000576713 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-219ENST00000576713 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
NPLOC4-219ENST00000576713 USP47Q96K76 1375 aa13.42□□□□□ -0.26
NPLOC4-219ENST00000576713 SOS2Q07890 1332 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-219ENST00000576713 ST20-MTHFSA0A0A6YYL1 179 aa13.41□□□□□ -0.26
NPLOC4-219ENST00000576713 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
NPLOC4-219ENST00000576713 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-219ENST00000576713 LRP6O75581 1613 aa13.4□□□□□ -0.26
NPLOC4-219ENST00000576713 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-219ENST00000576713 JCADQ9P266 1359 aa13.4□□□□□ -0.26
NPLOC4-219ENST00000576713 SBNO2Q9Y2G9 1366 aa13.4□□□□□ -0.26
NPLOC4-219ENST00000576713 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
NPLOC4-219ENST00000576713 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-219ENST00000576713 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 RGS17Q9UGC6 210 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
NPLOC4-219ENST00000576713 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
NPLOC4-219ENST00000576713 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
NPLOC4-219ENST00000576713 EVC2Q86UK5 1308 aa13.37□□□□□ -0.27
NPLOC4-219ENST00000576713 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
NPLOC4-219ENST00000576713 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 SOCS7O14512 581 aa13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 ACEP12821 1306 aa13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
NPLOC4-219ENST00000576713 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 CD163L1Q9NR16 1453 aa13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
NPLOC4-219ENST00000576713 HSPA5P11021 654 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-219ENST00000576713 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
NPLOC4-219ENST00000576713 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-219ENST00000576713 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
NPLOC4-219ENST00000576713 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
NPLOC4-219ENST00000576713 ABCA3Q99758 1704 aa13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 PSME1Q06323 249 aa13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
NPLOC4-219ENST00000576713 SSH2Q76I76 1423 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 MYOM1P52179 1685 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 USP6P35125 1406 aa13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-219ENST00000576713 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-219ENST00000576713 SLC12A5Q9H2X9 1139 aa13.29□□□□□ -0.28
NPLOC4-219ENST00000576713 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
NPLOC4-219ENST00000576713 EIF4G2P78344 907 aaKnown RBP eCLIP13.28□□□□□ -0.282e-15■■■■□ 23.9
NPLOC4-219ENST00000576713 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
NPLOC4-219ENST00000576713 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
NPLOC4-219ENST00000576713 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
NPLOC4-219ENST00000576713 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.29
NPLOC4-219ENST00000576713 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
NPLOC4-219ENST00000576713 TMF1P82094 1093 aa13.26□□□□□ -0.29
NPLOC4-219ENST00000576713 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
NPLOC4-219ENST00000576713 MARF1Q9Y4F3 1742 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-219ENST00000576713 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-219ENST00000576713 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms