RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 MARCH10Q8NA82 808 aaPredicted RBP15.43■□□□□ 0.06
CALCOCO2-228ENST00000576582 AXIN2Q9Y2T1 843 aa15.43■□□□□ 0.06
CALCOCO2-228ENST00000576582 RGPD3A6NKT7 1758 aaPredicted RBP15.43■□□□□ 0.06
CALCOCO2-228ENST00000576582 RGPD4Q7Z3J3 1758 aa15.43■□□□□ 0.06
CALCOCO2-228ENST00000576582 EXOC5O00471 708 aa15.42■□□□□ 0.06
CALCOCO2-228ENST00000576582 ARHGEF25Q86VW2 580 aa15.42■□□□□ 0.06
CALCOCO2-228ENST00000576582 CARD10Q9BWT7 1032 aa15.42■□□□□ 0.06
CALCOCO2-228ENST00000576582 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
CALCOCO2-228ENST00000576582 SLIT3O75094 1523 aa15.42■□□□□ 0.06
CALCOCO2-228ENST00000576582 PTF1AQ7RTS3 328 aa15.41■□□□□ 0.06
CALCOCO2-228ENST00000576582 STK32BQ9NY57 414 aa15.41■□□□□ 0.06
CALCOCO2-228ENST00000576582 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
CALCOCO2-228ENST00000576582 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
CALCOCO2-228ENST00000576582 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
CALCOCO2-228ENST00000576582 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
CALCOCO2-228ENST00000576582 ZBTB7AO95365 584 aa15.39■□□□□ 0.05
CALCOCO2-228ENST00000576582 PTGER2P43116 358 aa15.39■□□□□ 0.05
CALCOCO2-228ENST00000576582 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
CALCOCO2-228ENST00000576582 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 CPSF1Q10570 1443 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 TTC21BQ7Z4L5 1316 aa15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
CALCOCO2-228ENST00000576582 COL18A1P39060 1754 aa15.37■□□□□ 0.05
CALCOCO2-228ENST00000576582 MTFR1LQ9H019 292 aa15.37■□□□□ 0.05
CALCOCO2-228ENST00000576582 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
CALCOCO2-228ENST00000576582 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
CALCOCO2-228ENST00000576582 CCDC7Q96M83 1385 aa15.36■□□□□ 0.05
CALCOCO2-228ENST00000576582 SYT17Q9BSW7 474 aa15.35■□□□□ 0.05
CALCOCO2-228ENST00000576582 ZNF784Q8NCA9 323 aaPredicted RBP15.34■□□□□ 0.05
CALCOCO2-228ENST00000576582 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
CALCOCO2-228ENST00000576582 FHDC1Q9C0D6 1143 aaPredicted RBP15.33■□□□□ 0.04
CALCOCO2-228ENST00000576582 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
CALCOCO2-228ENST00000576582 SOX12O15370 315 aa15.32■□□□□ 0.04
CALCOCO2-228ENST00000576582 L3MBTL2Q969R5 705 aa15.32■□□□□ 0.04
CALCOCO2-228ENST00000576582 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
CALCOCO2-228ENST00000576582 WNK3Q9BYP7 1800 aa15.31■□□□□ 0.04
CALCOCO2-228ENST00000576582 ABCC6O95255 1503 aa15.3■□□□□ 0.04
CALCOCO2-228ENST00000576582 AKAP12Q02952 1782 aa15.3■□□□□ 0.04
CALCOCO2-228ENST00000576582 KTN1Q86UP2 1357 aaKnown RBP15.3■□□□□ 0.04
CALCOCO2-228ENST00000576582 ARXQ96QS3 562 aa15.3■□□□□ 0.04
CALCOCO2-228ENST00000576582 UTRNP46939 3433 aa15.3■□□□□ 0.04
CALCOCO2-228ENST00000576582 TNS2Q63HR2 1409 aa15.29■□□□□ 0.04
CALCOCO2-228ENST00000576582 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
CALCOCO2-228ENST00000576582 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
CALCOCO2-228ENST00000576582 IL2RBP14784 551 aa15.28■□□□□ 0.04
CALCOCO2-228ENST00000576582 MYOM1P52179 1685 aa15.28■□□□□ 0.04
CALCOCO2-228ENST00000576582 NFAT5O94916 1531 aa15.27■□□□□ 0.04
CALCOCO2-228ENST00000576582 USP31Q70CQ4 1352 aa15.27■□□□□ 0.04
CALCOCO2-228ENST00000576582 ERBB3P21860 1342 aa15.27■□□□□ 0.04
CALCOCO2-228ENST00000576582 ACSBG1Q96GR2 724 aa15.27■□□□□ 0.04
CALCOCO2-228ENST00000576582 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
CALCOCO2-228ENST00000576582 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
CALCOCO2-228ENST00000576582 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO2-228ENST00000576582 SLC16A10Q8TF71 515 aa15.26■□□□□ 0.03
CALCOCO2-228ENST00000576582 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
CALCOCO2-228ENST00000576582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
CALCOCO2-228ENST00000576582 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
CALCOCO2-228ENST00000576582 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
CALCOCO2-228ENST00000576582 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
CALCOCO2-228ENST00000576582 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
CALCOCO2-228ENST00000576582 MON2Q7Z3U7 1717 aa15.23■□□□□ 0.03
CALCOCO2-228ENST00000576582 NHSQ6T4R5 1651 aa15.23■□□□□ 0.03
CALCOCO2-228ENST00000576582 GPR162Q16538 588 aa15.23■□□□□ 0.03
CALCOCO2-228ENST00000576582 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
CALCOCO2-228ENST00000576582 POLD1P28340 1107 aa15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 NME9Q86XW9 330 aa15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 SIN3AQ96ST3 1273 aa15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 LRRC4BQ9NT99 713 aa15.22■□□□□ 0.03
CALCOCO2-228ENST00000576582 CHD4Q14839 1912 aa15.21■□□□□ 0.03
CALCOCO2-228ENST00000576582 ZNF827Q17R98 1081 aa15.21■□□□□ 0.03
CALCOCO2-228ENST00000576582 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
CALCOCO2-228ENST00000576582 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CALCOCO2-228ENST00000576582 TERF2IPQ9NYB0 399 aa15.2■□□□□ 0.02
CALCOCO2-228ENST00000576582 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CALCOCO2-228ENST00000576582 PAPPAQ13219 1627 aa15.19■□□□□ 0.02
CALCOCO2-228ENST00000576582 IP6K1Q92551 441 aa15.19■□□□□ 0.02
CALCOCO2-228ENST00000576582 PUS7Q96PZ0 661 aaKnown RBP15.19■□□□□ 0.02
CALCOCO2-228ENST00000576582 KAT6BQ8WYB5 2073 aa15.19■□□□□ 0.02
CALCOCO2-228ENST00000576582 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
CALCOCO2-228ENST00000576582 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
CALCOCO2-228ENST00000576582 SLC12A5Q9H2X9 1139 aa15.18■□□□□ 0.02
CALCOCO2-228ENST00000576582 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
CALCOCO2-228ENST00000576582 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
CALCOCO2-228ENST00000576582 BTAF1O14981 1849 aa15.16■□□□□ 0.02
CALCOCO2-228ENST00000576582 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
CALCOCO2-228ENST00000576582 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
CALCOCO2-228ENST00000576582 PNPLA7Q6ZV29 1317 aa15.16■□□□□ 0.02
CALCOCO2-228ENST00000576582 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
CALCOCO2-228ENST00000576582 LTN1O94822 1766 aa15.14■□□□□ 0.01
CALCOCO2-228ENST00000576582 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
CALCOCO2-228ENST00000576582 GIGYF1O75420 1035 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO2-228ENST00000576582 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
CALCOCO2-228ENST00000576582 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO2-228ENST00000576582 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
CALCOCO2-228ENST00000576582 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
CALCOCO2-228ENST00000576582 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms