RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TOMM22Q9NS69 142 aa15.64■□□□□ 0.09
PCDHGB3-201ENST00000576222 ZNF330Q9Y3S2 320 aaPredicted RBP15.64■□□□□ 0.09
PCDHGB3-201ENST00000576222 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
PCDHGB3-201ENST00000576222 HS1BP3Q53T59 392 aa15.64■□□□□ 0.09
PCDHGB3-201ENST00000576222 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 NESP48681 1621 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 RLBP1P12271 317 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 CCDC70Q6NSX1 233 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 ACBD3Q9H3P7 528 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 UGGT2Q9NYU1 1516 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 CEBPZQ03701 1054 aaKnown RBP15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 GDPD2Q9HCC8 539 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 HOOK1Q9UJC3 728 aaKnown RBP15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 TNNQ9UQP3 1299 aa15.63■□□□□ 0.09
PCDHGB3-201ENST00000576222 CUL7Q14999 1698 aa15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 CCP110O43303 1012 aa15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 ADCY5O95622 1261 aa15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 FILIP1Q7Z7B0 1213 aa15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 TRIM29Q14134 588 aa15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
PCDHGB3-201ENST00000576222 SPATA32Q96LK8 384 aa15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 ZSCAN31Q96LW9 406 aaPredicted RBP15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 ERICH4A6NGS2 130 aa15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 PRIM1P49642 420 aaKnown RBP15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 PDILTQ8N807 584 aa15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 MAP4K4O95819 1239 aaPredicted RBP15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 PRAM1Q96QH2 718 aa15.61■□□□□ 0.09
PCDHGB3-201ENST00000576222 UVSSAQ2YD98 709 aa15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 LRRFIP1Q32MZ4 808 aaKnown RBP15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 CABP1Q9NZU7 370 aa15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 GAS2L2Q8NHY3 880 aa15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 DDX58O95786 925 aaKnown RBP15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
PCDHGB3-201ENST00000576222 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 HIP1O00291 1037 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 SULT6B1Q6IMI4 303 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 OLFM4Q6UX06 510 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 IPO7O95373 1038 aaKnown RBP15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 CSB-PGBD3P0DP91 1061 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 TESK2Q96S53 571 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 IL1RAPL2Q9NP60 686 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 ANKRD1Q15327 319 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 JAKMIP1Q96N16 626 aaKnown RBP15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 CGNQ9P2M7 1197 aaKnown RBP15.59■□□□□ 0.09
PCDHGB3-201ENST00000576222 NOLC1Q14978 699 aaKnown RBP eCLIP15.58■□□□□ 0.09
PCDHGB3-201ENST00000576222 CAMK4Q16566 473 aa15.58■□□□□ 0.09
PCDHGB3-201ENST00000576222 ZNF396Q96N95 335 aaPredicted RBP15.58■□□□□ 0.09
PCDHGB3-201ENST00000576222 SCAF11Q99590 1463 aaKnown RBP15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 STK3Q13188 491 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 DHX8Q14562 1220 aaKnown RBP15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 TNNT1P13805 278 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 PTPN14Q15678 1187 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 ANKRD20A12PQ8NF67 263 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 FERMT3Q86UX7 667 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 AK7Q96M32 723 aa15.58■□□□□ 0.08
PCDHGB3-201ENST00000576222 PDIA4P13667 645 aaKnown RBP15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 MX1P20591 662 aa15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 CWC27Q6UX04 472 aaKnown RBP15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 ZNF830Q96NB3 372 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 C16orf45Q96MC5 204 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 TTC22Q5TAA0 569 aa15.57■□□□□ 0.08
PCDHGB3-201ENST00000576222 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 TRDNQ13061 729 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 KIAA0586Q9BVV6 1533 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 CCDC83Q8IWF9 413 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 CFAP43Q8NDM7 1665 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 CASTP20810 708 aaKnown RBP15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 STK38Q15208 465 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 CEP57L1Q8IYX8 460 aa15.56■□□□□ 0.08
PCDHGB3-201ENST00000576222 ME1P48163 572 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 PRAG1Q86YV5 1406 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 UBXN4Q92575 508 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 TMX3Q96JJ7 454 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 KIF2AO00139 706 aaPredicted RBP15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 KIF18AQ8NI77 898 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 CFAP45Q9UL16 551 aa15.55■□□□□ 0.08
PCDHGB3-201ENST00000576222 NOL7Q9UMY1 257 aaKnown RBP15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 IL16Q14005 1332 aa15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 ATAD2Q6PL18 1390 aa15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB3-201ENST00000576222 ERC1Q8IUD2 1116 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms