RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
TSR1-203ENST00000575049 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
TSR1-203ENST00000575049 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
TSR1-203ENST00000575049 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
TSR1-203ENST00000575049 ZNF330Q9Y3S2 320 aaPredicted RBP8.09□□□□□ -1.11
TSR1-203ENST00000575049 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
TSR1-203ENST00000575049 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
TSR1-203ENST00000575049 ADH1CP00326 375 aa8.08□□□□□ -1.12
TSR1-203ENST00000575049 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
TSR1-203ENST00000575049 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
TSR1-203ENST00000575049 A6NJR5 290 aa8.07□□□□□ -1.12
TSR1-203ENST00000575049 GRM5P41594 1212 aa8.07□□□□□ -1.12
TSR1-203ENST00000575049 PROSER2Q86WR7 435 aaPredicted RBP8.07□□□□□ -1.12
TSR1-203ENST00000575049 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
TSR1-203ENST00000575049 DGAT1O75907 488 aa8.06□□□□□ -1.12
TSR1-203ENST00000575049 FSHRP23945 695 aa8.06□□□□□ -1.12
TSR1-203ENST00000575049 NR5A1Q13285 461 aa8.06□□□□□ -1.12
TSR1-203ENST00000575049 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
TSR1-203ENST00000575049 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
TSR1-203ENST00000575049 MCCD1P59942 119 aaPredicted RBP8.05□□□□□ -1.12
TSR1-203ENST00000575049 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
TSR1-203ENST00000575049 NNTQ13423 1086 aa8.05□□□□□ -1.12
TSR1-203ENST00000575049 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
TSR1-203ENST00000575049 ZNF592Q92610 1267 aa8.05□□□□□ -1.12
TSR1-203ENST00000575049 KCTD15Q96SI1 283 aaPredicted RBP8.05□□□□□ -1.12
TSR1-203ENST00000575049 TRAIPQ9BWF2 469 aa8.05□□□□□ -1.12
TSR1-203ENST00000575049 HPS1Q92902 700 aa8.04□□□□□ -1.12
TSR1-203ENST00000575049 SHROOM4Q9ULL8 1493 aa8.03□□□□□ -1.12
TSR1-203ENST00000575049 AVPP01185 164 aa8.03□□□□□ -1.12
TSR1-203ENST00000575049 NR3C2P08235 984 aa8.03□□□□□ -1.12
TSR1-203ENST00000575049 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
TSR1-203ENST00000575049 Q6ZNB5 142 aa8.03□□□□□ -1.12
TSR1-203ENST00000575049 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
TSR1-203ENST00000575049 ESPNB1AK53 854 aa8.02□□□□□ -1.13
TSR1-203ENST00000575049 TRAK2O60296 914 aa8.02□□□□□ -1.13
TSR1-203ENST00000575049 SOX11P35716 441 aa8.02□□□□□ -1.13
TSR1-203ENST00000575049 RGS22Q8NE09 1264 aa8.02□□□□□ -1.13
TSR1-203ENST00000575049 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
TSR1-203ENST00000575049 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
TSR1-203ENST00000575049 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
TSR1-203ENST00000575049 IGSF3O75054 1194 aa8□□□□□ -1.13
TSR1-203ENST00000575049 RAB15P59190 212 aa8□□□□□ -1.13
TSR1-203ENST00000575049 MYT1Q01538 1121 aa8□□□□□ -1.13
TSR1-203ENST00000575049 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
TSR1-203ENST00000575049 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
TSR1-203ENST00000575049 TIMP2P16035 220 aa7.99□□□□□ -1.13
TSR1-203ENST00000575049 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
TSR1-203ENST00000575049 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
TSR1-203ENST00000575049 CTC1Q2NKJ3 1217 aa7.99□□□□□ -1.13
TSR1-203ENST00000575049 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
TSR1-203ENST00000575049 KLF16Q9BXK1 252 aaPredicted RBP7.99□□□□□ -1.13
TSR1-203ENST00000575049 ALG2Q9H553 416 aa7.99□□□□□ -1.13
TSR1-203ENST00000575049 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
TSR1-203ENST00000575049 SMCPP49901 116 aaPredicted RBP7.98□□□□□ -1.13
TSR1-203ENST00000575049 RNF20Q5VTR2 975 aa7.98□□□□□ -1.13
TSR1-203ENST00000575049 CRIPAKQ8N1N5 446 aa7.98□□□□□ -1.13
TSR1-203ENST00000575049 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
TSR1-203ENST00000575049 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
TSR1-203ENST00000575049 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
TSR1-203ENST00000575049 LCE2BO14633 110 aa7.97□□□□□ -1.13
TSR1-203ENST00000575049 AXIN1O15169 862 aa7.97□□□□□ -1.13
TSR1-203ENST00000575049 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
TSR1-203ENST00000575049 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
TSR1-203ENST00000575049 MTMR7Q9Y216 660 aa7.97□□□□□ -1.13
TSR1-203ENST00000575049 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 CAPN5O15484 640 aaPredicted RBP7.96□□□□□ -1.14
TSR1-203ENST00000575049 TRAF7Q6Q0C0 670 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 AAASQ9NRG9 546 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 TMPRSS4Q9NRS4 437 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 PGPEP1Q9NXJ5 209 aa7.96□□□□□ -1.14
TSR1-203ENST00000575049 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
TSR1-203ENST00000575049 HDGFL1Q5TGJ6 251 aa7.95□□□□□ -1.14
TSR1-203ENST00000575049 RNF135Q8IUD6 432 aa7.95□□□□□ -1.14
TSR1-203ENST00000575049 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
TSR1-203ENST00000575049 GLMNQ92990 594 aa7.95□□□□□ -1.14
TSR1-203ENST00000575049 ZNF784Q8NCA9 323 aaPredicted RBP7.94□□□□□ -1.14
TSR1-203ENST00000575049 CCDC85AQ96PX6 553 aaPredicted RBP7.94□□□□□ -1.14
TSR1-203ENST00000575049 PCDHB11Q9Y5F2 797 aa7.94□□□□□ -1.14
TSR1-203ENST00000575049 ZNF777Q9ULD5 760 aaPredicted RBP7.93□□□□□ -1.14
TSR1-203ENST00000575049 PIK3CDO00329 1044 aa7.92□□□□□ -1.14
TSR1-203ENST00000575049 LILRA1O75019 489 aa7.92□□□□□ -1.14
TSR1-203ENST00000575049 TMCO4Q5TGY1 634 aa7.92□□□□□ -1.14
TSR1-203ENST00000575049 CYLDQ9NQC7 956 aa7.92□□□□□ -1.14
TSR1-203ENST00000575049 CHIC2Q9UKJ5 165 aa7.92□□□□□ -1.14
TSR1-203ENST00000575049 CBLBQ13191 982 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 TSGA10IPQ3SY00 556 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 TRIM52Q96A61 297 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 CALR3Q96L12 384 aaKnown RBP7.91□□□□□ -1.14
TSR1-203ENST00000575049 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 DOLKQ9UPQ8 538 aa7.91□□□□□ -1.14
TSR1-203ENST00000575049 BMP1P13497 986 aa7.9□□□□□ -1.14
TSR1-203ENST00000575049 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.14
TSR1-203ENST00000575049 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
TSR1-203ENST00000575049 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
TSR1-203ENST00000575049 Q6ZVU0 165 aa7.9□□□□□ -1.14
TSR1-203ENST00000575049 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms