RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 CARD10Q9BWT7 1032 aa9.24□□□□□ -0.93
TRIM25-209ENST00000574997 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
TRIM25-209ENST00000574997 SLIT3O75094 1523 aa9.23□□□□□ -0.93
TRIM25-209ENST00000574997 EXOC5O00471 708 aa9.23□□□□□ -0.93
TRIM25-209ENST00000574997 TTC21BQ7Z4L5 1316 aa9.23□□□□□ -0.93
TRIM25-209ENST00000574997 ROCK2O75116 1388 aaKnown RBP9.23□□□□□ -0.93
TRIM25-209ENST00000574997 KCNQ2O43526 872 aa9.22□□□□□ -0.93
TRIM25-209ENST00000574997 TRPM1Q7Z4N2 1603 aa9.22□□□□□ -0.93
TRIM25-209ENST00000574997 CCDC7Q96M83 1385 aa9.22□□□□□ -0.93
TRIM25-209ENST00000574997 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
TRIM25-209ENST00000574997 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
TRIM25-209ENST00000574997 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
TRIM25-209ENST00000574997 ABCC6O95255 1503 aa9.21□□□□□ -0.93
TRIM25-209ENST00000574997 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
TRIM25-209ENST00000574997 PPP1R1BQ9UD71 204 aaPredicted RBP9.21□□□□□ -0.94
TRIM25-209ENST00000574997 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
TRIM25-209ENST00000574997 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.94
TRIM25-209ENST00000574997 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
TRIM25-209ENST00000574997 HMGB2P26583 209 aaKnown RBP9.2□□□□□ -0.94
TRIM25-209ENST00000574997 KTN1Q86UP2 1357 aaKnown RBP9.2□□□□□ -0.94
TRIM25-209ENST00000574997 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
TRIM25-209ENST00000574997 UTRNP46939 3433 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 COL18A1P39060 1754 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 HDGFL2Q7Z4V5 671 aaPredicted RBP9.19□□□□□ -0.94
TRIM25-209ENST00000574997 TERF2IPQ9NYB0 399 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 SBF2Q86WG5 1849 aa9.19□□□□□ -0.94
TRIM25-209ENST00000574997 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
TRIM25-209ENST00000574997 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
TRIM25-209ENST00000574997 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
TRIM25-209ENST00000574997 MARCH10Q8NA82 808 aaPredicted RBP9.18□□□□□ -0.94
TRIM25-209ENST00000574997 SIN3AQ96ST3 1273 aa9.18□□□□□ -0.94
TRIM25-209ENST00000574997 CASZ1Q86V15 1759 aa9.17□□□□□ -0.94
TRIM25-209ENST00000574997 CARD11Q9BXL7 1154 aa9.17□□□□□ -0.94
TRIM25-209ENST00000574997 STK32BQ9NY57 414 aa9.17□□□□□ -0.94
TRIM25-209ENST00000574997 MYOM1P52179 1685 aa9.16□□□□□ -0.94
TRIM25-209ENST00000574997 LRRC37A3O60309 1634 aa9.16□□□□□ -0.94
TRIM25-209ENST00000574997 TXNRD1Q16881 649 aa9.16□□□□□ -0.94
TRIM25-209ENST00000574997 PROM2Q8N271 834 aa9.16□□□□□ -0.94
TRIM25-209ENST00000574997 IL2RBP14784 551 aa9.15□□□□□ -0.94
TRIM25-209ENST00000574997 SLC15A2Q16348 729 aa9.15□□□□□ -0.94
TRIM25-209ENST00000574997 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
TRIM25-209ENST00000574997 ERBB3P21860 1342 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM25-209ENST00000574997 MTFR1LQ9H019 292 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
TRIM25-209ENST00000574997 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 NFAT5O94916 1531 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 WNK3Q9BYP7 1800 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 RGPD5Q99666 1765 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
TRIM25-209ENST00000574997 EDC4Q6P2E9 1401 aaKnown RBP9.14□□□□□ -0.95
TRIM25-209ENST00000574997 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
TRIM25-209ENST00000574997 SOX12O15370 315 aa9.13□□□□□ -0.95
TRIM25-209ENST00000574997 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
TRIM25-209ENST00000574997 IP6K1Q92551 441 aa9.13□□□□□ -0.95
TRIM25-209ENST00000574997 TNS2Q63HR2 1409 aa9.13□□□□□ -0.95
TRIM25-209ENST00000574997 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
TRIM25-209ENST00000574997 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
TRIM25-209ENST00000574997 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
TRIM25-209ENST00000574997 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
TRIM25-209ENST00000574997 NME9Q86XW9 330 aa9.11□□□□□ -0.95
TRIM25-209ENST00000574997 COG3Q96JB2 828 aa9.11□□□□□ -0.95
TRIM25-209ENST00000574997 PDGFDQ9GZP0 370 aaPredicted RBP9.11□□□□□ -0.95
TRIM25-209ENST00000574997 CGNL1Q0VF96 1302 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 CD163L1Q9NR16 1453 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 ZBTB7AO95365 584 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 PTGER2P43116 358 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 CDCA8Q53HL2 280 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 PTF1AQ7RTS3 328 aa9.1□□□□□ -0.95
TRIM25-209ENST00000574997 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
TRIM25-209ENST00000574997 CEP350Q5VT06 3117 aa9.09□□□□□ -0.95
TRIM25-209ENST00000574997 SYT17Q9BSW7 474 aa9.09□□□□□ -0.95
TRIM25-209ENST00000574997 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
TRIM25-209ENST00000574997 NHSQ6T4R5 1651 aa9.09□□□□□ -0.95
TRIM25-209ENST00000574997 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
TRIM25-209ENST00000574997 MAP3K5Q99683 1374 aa9.09□□□□□ -0.95
TRIM25-209ENST00000574997 LTN1O94822 1766 aa9.09□□□□□ -0.95
TRIM25-209ENST00000574997 SENP3-EIF4A1A0A087X0R7 540 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 AMPHP49418 695 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 ARXQ96QS3 562 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 SGIP1Q9BQI5 828 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
TRIM25-209ENST00000574997 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
TRIM25-209ENST00000574997 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 KCNA4P22459 653 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 POLD1P28340 1107 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 TMF1P82094 1093 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 ZCRB1Q8TBF4 217 aaKnown RBP9.07□□□□□ -0.96
TRIM25-209ENST00000574997 DDX54Q8TDD1 881 aaKnown RBP9.07□□□□□ -0.96
TRIM25-209ENST00000574997 ACSBG1Q96GR2 724 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 TESK2Q96S53 571 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 FHDC1Q9C0D6 1143 aaPredicted RBP9.07□□□□□ -0.96
TRIM25-209ENST00000574997 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
TRIM25-209ENST00000574997 HOXC9P31274 260 aa9.06□□□□□ -0.96
TRIM25-209ENST00000574997 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
TRIM25-209ENST00000574997 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
TRIM25-209ENST00000574997 RTL1A6NKG5 1358 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms