RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 SLIT3O75094 1523 aa23.13■■□□□ 1.29
TMEM88-202ENST00000574668 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
TMEM88-202ENST00000574668 TMC1Q8TDI8 760 aa23.12■■□□□ 1.29
TMEM88-202ENST00000574668 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
TMEM88-202ENST00000574668 PIK3C2AO00443 1686 aa23.11■■□□□ 1.29
TMEM88-202ENST00000574668 AATKQ6ZMQ8 1374 aa23.11■■□□□ 1.29
TMEM88-202ENST00000574668 AXIN2Q9Y2T1 843 aa23.1■■□□□ 1.29
TMEM88-202ENST00000574668 NBPF14Q5TI25 921 aa23.09■■□□□ 1.29
TMEM88-202ENST00000574668 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
TMEM88-202ENST00000574668 LRRC37A3O60309 1634 aa23.08■■□□□ 1.29
TMEM88-202ENST00000574668 PEAK1Q9H792 1746 aa23.08■■□□□ 1.29
TMEM88-202ENST00000574668 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.28
TMEM88-202ENST00000574668 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.28
TMEM88-202ENST00000574668 OVOS2Q6IE36 1432 aa23.08■■□□□ 1.28
TMEM88-202ENST00000574668 COL18A1P39060 1754 aa23.07■■□□□ 1.28
TMEM88-202ENST00000574668 SOX12O15370 315 aa23.07■■□□□ 1.28
TMEM88-202ENST00000574668 PTF1AQ7RTS3 328 aa23.07■■□□□ 1.28
TMEM88-202ENST00000574668 DDB1Q16531 1140 aa23.06■■□□□ 1.28
TMEM88-202ENST00000574668 TTC21BQ7Z4L5 1316 aa23.05■■□□□ 1.28
TMEM88-202ENST00000574668 HDGFL2Q7Z4V5 671 aaPredicted RBP23.04■■□□□ 1.28
TMEM88-202ENST00000574668 SLC12A5Q9H2X9 1139 aa23.04■■□□□ 1.28
TMEM88-202ENST00000574668 CPSF1Q10570 1443 aaKnown RBP23.04■■□□□ 1.28
TMEM88-202ENST00000574668 WDR17Q8IZU2 1322 aa23.04■■□□□ 1.28
TMEM88-202ENST00000574668 NINLQ9Y2I6 1382 aa23.03■■□□□ 1.28
TMEM88-202ENST00000574668 ARHGEF25Q86VW2 580 aa23.03■■□□□ 1.28
TMEM88-202ENST00000574668 MARCH10Q8NA82 808 aaPredicted RBP23.02■■□□□ 1.28
TMEM88-202ENST00000574668 ZNF692Q9BU19 519 aaPredicted RBP23.02■■□□□ 1.28
TMEM88-202ENST00000574668 TERF2IPQ9NYB0 399 aa23.02■■□□□ 1.28
TMEM88-202ENST00000574668 C11orf95C9JLR9 678 aaPredicted RBP23.01■■□□□ 1.27
TMEM88-202ENST00000574668 WNK3Q9BYP7 1800 aa23■■□□□ 1.27
TMEM88-202ENST00000574668 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
TMEM88-202ENST00000574668 PLSCR1O15162 318 aa22.99■■□□□ 1.27
TMEM88-202ENST00000574668 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
TMEM88-202ENST00000574668 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
TMEM88-202ENST00000574668 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
TMEM88-202ENST00000574668 KCNQ2O43526 872 aa22.98■■□□□ 1.27
TMEM88-202ENST00000574668 CSB-PGBD3P0DP91 1061 aa22.98■■□□□ 1.27
TMEM88-202ENST00000574668 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
TMEM88-202ENST00000574668 SPON1Q9HCB6 807 aa22.98■■□□□ 1.27
TMEM88-202ENST00000574668 KIF7Q2M1P5 1343 aa22.98■■□□□ 1.27
TMEM88-202ENST00000574668 RGPD5Q99666 1765 aa22.98■■□□□ 1.27
TMEM88-202ENST00000574668 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
TMEM88-202ENST00000574668 NFAT5O94916 1531 aa22.97■■□□□ 1.27
TMEM88-202ENST00000574668 PROM2Q8N271 834 aa22.96■■□□□ 1.27
TMEM88-202ENST00000574668 CARD10Q9BWT7 1032 aa22.96■■□□□ 1.27
TMEM88-202ENST00000574668 PPP1R1BQ9UD71 204 aaPredicted RBP22.96■■□□□ 1.27
TMEM88-202ENST00000574668 TTC21AQ8NDW8 1320 aa22.96■■□□□ 1.27
TMEM88-202ENST00000574668 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
TMEM88-202ENST00000574668 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
TMEM88-202ENST00000574668 CDCA7Q9BWT1 371 aaPredicted RBP22.95■■□□□ 1.26
TMEM88-202ENST00000574668 PDGFDQ9GZP0 370 aaPredicted RBP22.95■■□□□ 1.26
TMEM88-202ENST00000574668 A0A1W2PP64 1363 aa22.93■■□□□ 1.26
TMEM88-202ENST00000574668 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
TMEM88-202ENST00000574668 CCDC7Q96M83 1385 aa22.93■■□□□ 1.26
TMEM88-202ENST00000574668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.93■■□□□ 1.26
TMEM88-202ENST00000574668 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
TMEM88-202ENST00000574668 BCL9O00512 1426 aa22.91■■□□□ 1.26
TMEM88-202ENST00000574668 WASHC2AQ641Q2 1341 aa22.9■■□□□ 1.26
TMEM88-202ENST00000574668 EXOC5O00471 708 aa22.9■■□□□ 1.26
TMEM88-202ENST00000574668 CASZ1Q86V15 1759 aa22.89■■□□□ 1.26
TMEM88-202ENST00000574668 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.26
TMEM88-202ENST00000574668 YY1P25490 414 aa22.89■■□□□ 1.25
TMEM88-202ENST00000574668 NME9Q86XW9 330 aa22.89■■□□□ 1.25
TMEM88-202ENST00000574668 ZBTB7AO95365 584 aa22.88■■□□□ 1.25
TMEM88-202ENST00000574668 EDC4Q6P2E9 1401 aaKnown RBP22.88■■□□□ 1.25
TMEM88-202ENST00000574668 TXNRD1Q16881 649 aa22.87■■□□□ 1.25
TMEM88-202ENST00000574668 PANK3Q9H999 370 aa22.87■■□□□ 1.25
TMEM88-202ENST00000574668 TNS2Q63HR2 1409 aa22.86■■□□□ 1.25
TMEM88-202ENST00000574668 MYOM1P52179 1685 aa22.86■■□□□ 1.25
TMEM88-202ENST00000574668 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
TMEM88-202ENST00000574668 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
TMEM88-202ENST00000574668 ABCC6O95255 1503 aa22.85■■□□□ 1.25
TMEM88-202ENST00000574668 NLRP2Q9NX02 1062 aa22.84■■□□□ 1.25
TMEM88-202ENST00000574668 ERBB3P21860 1342 aa22.83■■□□□ 1.25
TMEM88-202ENST00000574668 STK32BQ9NY57 414 aa22.83■■□□□ 1.25
TMEM88-202ENST00000574668 ATF5Q9Y2D1 282 aaPredicted RBP22.83■■□□□ 1.25
TMEM88-202ENST00000574668 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
TMEM88-202ENST00000574668 PTGER2P43116 358 aa22.82■■□□□ 1.24
TMEM88-202ENST00000574668 SLC15A2Q16348 729 aa22.82■■□□□ 1.24
TMEM88-202ENST00000574668 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
TMEM88-202ENST00000574668 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
TMEM88-202ENST00000574668 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
TMEM88-202ENST00000574668 LTN1O94822 1766 aa22.8■■□□□ 1.24
TMEM88-202ENST00000574668 NHSQ6T4R5 1651 aa22.8■■□□□ 1.24
TMEM88-202ENST00000574668 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
TMEM88-202ENST00000574668 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
TMEM88-202ENST00000574668 IL2RBP14784 551 aa22.79■■□□□ 1.24
TMEM88-202ENST00000574668 KNSTRNQ9Y448 316 aa22.79■■□□□ 1.24
TMEM88-202ENST00000574668 CGNL1Q0VF96 1302 aa22.78■■□□□ 1.24
TMEM88-202ENST00000574668 COG3Q96JB2 828 aa22.77■■□□□ 1.24
TMEM88-202ENST00000574668 FYB1O15117 783 aa22.75■■□□□ 1.23
TMEM88-202ENST00000574668 GGNBP2Q9H3C7 697 aa22.75■■□□□ 1.23
TMEM88-202ENST00000574668 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
TMEM88-202ENST00000574668 PAPPAQ13219 1627 aa22.72■■□□□ 1.23
TMEM88-202ENST00000574668 LTV1Q96GA3 475 aaPredicted RBP22.72■■□□□ 1.23
TMEM88-202ENST00000574668 MTFR1LQ9H019 292 aa22.72■■□□□ 1.23
TMEM88-202ENST00000574668 BTAF1O14981 1849 aa22.71■■□□□ 1.23
TMEM88-202ENST00000574668 DDX10Q13206 875 aaKnown RBP22.71■■□□□ 1.23
TMEM88-202ENST00000574668 ZNF827Q17R98 1081 aa22.71■■□□□ 1.23
TMEM88-202ENST00000574668 SGIP1Q9BQI5 828 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms