RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-202ENST00000573710 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-202ENST00000573710 RNF187Q5TA31 235 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-202ENST00000573710 MAP3K9P80192 1104 aa18.68■□□□□ 0.58
CACNA1A-202ENST00000573710 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
CACNA1A-202ENST00000573710 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
CACNA1A-202ENST00000573710 FIBPO43427 364 aa18.68■□□□□ 0.58
CACNA1A-202ENST00000573710 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
CACNA1A-202ENST00000573710 SH3BP5O60239 455 aa18.67■□□□□ 0.58
CACNA1A-202ENST00000573710 ZBTB9Q96C00 473 aa18.67■□□□□ 0.58
CACNA1A-202ENST00000573710 CCDC39Q9UFE4 941 aa18.67■□□□□ 0.58
CACNA1A-202ENST00000573710 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-202ENST00000573710 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 PDE4AP27815 886 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 JAKMIP3Q5VZ66 844 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 MPHOSPH8Q99549 860 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 EPB41L2O43491 1005 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
CACNA1A-202ENST00000573710 CFAP58Q5T655 872 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 PPP4R3AQ6IN85 833 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 PSMC4P43686 418 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 ME1P48163 572 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
CACNA1A-202ENST00000573710 CTNNA2P26232 953 aa18.64■□□□□ 0.57
CACNA1A-202ENST00000573710 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
CACNA1A-202ENST00000573710 APAF1O14727 1248 aa18.64■□□□□ 0.57
CACNA1A-202ENST00000573710 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 TMCO3Q6UWJ1 677 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 FERMT2Q96AC1 680 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 LMAN1P49257 510 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 DDX19BQ9UMR2 479 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 TDO2P48775 406 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 IFFO1Q0D2I5 559 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
CACNA1A-202ENST00000573710 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 MRVI1Q9Y6F6 885 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 FERP16591 822 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 PKNOX2Q96KN3 472 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 SLC4A8Q2Y0W8 1093 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 OTUD6BQ8N6M0 293 aa18.62■□□□□ 0.57
CACNA1A-202ENST00000573710 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 RAB3IL1Q8TBN0 382 aa18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 DNAI2Q9GZS0 605 aa18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 HOOK3Q86VS8 718 aa18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 TRIM22Q8IYM9 498 aa18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 PUF60Q9UHX1 559 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-202ENST00000573710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 RAI14Q9P0K7 980 aa18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 NUCB2P80303 420 aa18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 PAIP2Q9BPZ3 127 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
CACNA1A-202ENST00000573710 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-202ENST00000573710 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-202ENST00000573710 VGFO15240 615 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-202ENST00000573710 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
CACNA1A-202ENST00000573710 TAF4BQ92750 862 aa18.59■□□□□ 0.57
CACNA1A-202ENST00000573710 NLRP13Q86W25 1043 aa18.58■□□□□ 0.57
CACNA1A-202ENST00000573710 ATP2C2O75185 946 aa18.58■□□□□ 0.57
CACNA1A-202ENST00000573710 CCDC150Q8NCX0 1101 aa18.58■□□□□ 0.57
CACNA1A-202ENST00000573710 CABP4P57796 275 aa18.58■□□□□ 0.56
CACNA1A-202ENST00000573710 TNIP1Q15025 636 aa18.58■□□□□ 0.56
CACNA1A-202ENST00000573710 TMOD2Q9NZR1 351 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 CLGNO14967 610 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 ERLIN1O75477 346 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 SPTY2D1Q68D10 685 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 DAAM2Q86T65 1068 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 LRP2BPQ9P2M1 347 aa18.57■□□□□ 0.56
CACNA1A-202ENST00000573710 ANKRD18BA2A2Z9 1011 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 UQCRHLA0A096LP55 91 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 NLRP6P59044 892 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 BANK1Q8NDB2 785 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 NACAP1Q9BZK3 213 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 CUX2O14529 1486 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 API5Q9BZZ5 524 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 C22orf23Q9BZE7 217 aa18.56■□□□□ 0.56
CACNA1A-202ENST00000573710 CCP110O43303 1012 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 PRPF4BQ13523 1007 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 NEK4P51957 841 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 CEP57L1Q8IYX8 460 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms