RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 SBF2Q86WG5 1849 aa17.68■□□□□ 0.42
POLR2A-202ENST00000573603 NFAT5O94916 1531 aa17.67■□□□□ 0.42
POLR2A-202ENST00000573603 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
POLR2A-202ENST00000573603 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
POLR2A-202ENST00000573603 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
POLR2A-202ENST00000573603 DDB1Q16531 1140 aa17.65■□□□□ 0.42
POLR2A-202ENST00000573603 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
POLR2A-202ENST00000573603 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
POLR2A-202ENST00000573603 KCNH5Q8NCM2 988 aa17.64■□□□□ 0.41
POLR2A-202ENST00000573603 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
POLR2A-202ENST00000573603 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
POLR2A-202ENST00000573603 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
POLR2A-202ENST00000573603 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
POLR2A-202ENST00000573603 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
POLR2A-202ENST00000573603 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
POLR2A-202ENST00000573603 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
POLR2A-202ENST00000573603 LTN1O94822 1766 aa17.62■□□□□ 0.41
POLR2A-202ENST00000573603 NBPF14Q5TI25 921 aa17.61■□□□□ 0.41
POLR2A-202ENST00000573603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
POLR2A-202ENST00000573603 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
POLR2A-202ENST00000573603 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
POLR2A-202ENST00000573603 ABCC6O95255 1503 aa17.61■□□□□ 0.41
POLR2A-202ENST00000573603 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
POLR2A-202ENST00000573603 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
POLR2A-202ENST00000573603 PTF1AQ7RTS3 328 aa17.58■□□□□ 0.4
POLR2A-202ENST00000573603 NME9Q86XW9 330 aa17.58■□□□□ 0.4
POLR2A-202ENST00000573603 MARCH10Q8NA82 808 aaPredicted RBP17.58■□□□□ 0.4
POLR2A-202ENST00000573603 CARD10Q9BWT7 1032 aa17.58■□□□□ 0.4
POLR2A-202ENST00000573603 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
POLR2A-202ENST00000573603 TNS2Q63HR2 1409 aa17.56■□□□□ 0.4
POLR2A-202ENST00000573603 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
POLR2A-202ENST00000573603 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
POLR2A-202ENST00000573603 HDGFL2Q7Z4V5 671 aaPredicted RBP17.55■□□□□ 0.4
POLR2A-202ENST00000573603 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
POLR2A-202ENST00000573603 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
POLR2A-202ENST00000573603 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
POLR2A-202ENST00000573603 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
POLR2A-202ENST00000573603 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
POLR2A-202ENST00000573603 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
POLR2A-202ENST00000573603 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
POLR2A-202ENST00000573603 BCL9O00512 1426 aa17.53■□□□□ 0.4
POLR2A-202ENST00000573603 ERBB3P21860 1342 aa17.52■□□□□ 0.4
POLR2A-202ENST00000573603 EXOC5O00471 708 aa17.52■□□□□ 0.4
POLR2A-202ENST00000573603 PLSCR1O15162 318 aa17.52■□□□□ 0.4
POLR2A-202ENST00000573603 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
POLR2A-202ENST00000573603 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
POLR2A-202ENST00000573603 PPP1R1BQ9UD71 204 aaPredicted RBP17.51■□□□□ 0.39
POLR2A-202ENST00000573603 TERF2IPQ9NYB0 399 aa17.5■□□□□ 0.39
POLR2A-202ENST00000573603 KCNQ2O43526 872 aa17.49■□□□□ 0.39
POLR2A-202ENST00000573603 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
POLR2A-202ENST00000573603 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
POLR2A-202ENST00000573603 IL2RBP14784 551 aa17.47■□□□□ 0.39
POLR2A-202ENST00000573603 PROM2Q8N271 834 aa17.47■□□□□ 0.39
POLR2A-202ENST00000573603 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
POLR2A-202ENST00000573603 BTAF1O14981 1849 aa17.47■□□□□ 0.39
POLR2A-202ENST00000573603 TXNRD1Q16881 649 aa17.46■□□□□ 0.39
POLR2A-202ENST00000573603 PDGFDQ9GZP0 370 aaPredicted RBP17.46■□□□□ 0.39
POLR2A-202ENST00000573603 MYOM1P52179 1685 aa17.45■□□□□ 0.38
POLR2A-202ENST00000573603 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
POLR2A-202ENST00000573603 TESK2Q96S53 571 aa17.45■□□□□ 0.38
POLR2A-202ENST00000573603 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
POLR2A-202ENST00000573603 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
POLR2A-202ENST00000573603 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
POLR2A-202ENST00000573603 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
POLR2A-202ENST00000573603 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
POLR2A-202ENST00000573603 PAPPAQ13219 1627 aa17.43■□□□□ 0.38
POLR2A-202ENST00000573603 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
POLR2A-202ENST00000573603 COG3Q96JB2 828 aa17.41■□□□□ 0.38
POLR2A-202ENST00000573603 KAT6BQ8WYB5 2073 aa17.41■□□□□ 0.38
POLR2A-202ENST00000573603 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
POLR2A-202ENST00000573603 IP6K1Q92551 441 aa17.4■□□□□ 0.38
POLR2A-202ENST00000573603 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
POLR2A-202ENST00000573603 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
POLR2A-202ENST00000573603 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
POLR2A-202ENST00000573603 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
POLR2A-202ENST00000573603 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
POLR2A-202ENST00000573603 USP47Q96K76 1375 aa17.39■□□□□ 0.37
POLR2A-202ENST00000573603 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
POLR2A-202ENST00000573603 FBLN1P23142 703 aa17.38■□□□□ 0.37
POLR2A-202ENST00000573603 AMPHP49418 695 aa17.38■□□□□ 0.37
POLR2A-202ENST00000573603 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
POLR2A-202ENST00000573603 YY1P25490 414 aa17.37■□□□□ 0.37
POLR2A-202ENST00000573603 HOXC9P31274 260 aa17.37■□□□□ 0.37
POLR2A-202ENST00000573603 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
POLR2A-202ENST00000573603 PTGER2P43116 358 aa17.35■□□□□ 0.37
POLR2A-202ENST00000573603 TMF1P82094 1093 aa17.35■□□□□ 0.37
POLR2A-202ENST00000573603 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
POLR2A-202ENST00000573603 MEGF6O75095 1541 aa17.35■□□□□ 0.37
POLR2A-202ENST00000573603 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
POLR2A-202ENST00000573603 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
POLR2A-202ENST00000573603 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
POLR2A-202ENST00000573603 ZNF827Q17R98 1081 aa17.34■□□□□ 0.37
POLR2A-202ENST00000573603 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
POLR2A-202ENST00000573603 SYTL4Q96C24 671 aaPredicted RBP17.33■□□□□ 0.36
POLR2A-202ENST00000573603 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
POLR2A-202ENST00000573603 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.36
POLR2A-202ENST00000573603 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
POLR2A-202ENST00000573603 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
POLR2A-202ENST00000573603 QSER1Q2KHR3 1735 aa17.31■□□□□ 0.36
POLR2A-202ENST00000573603 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms