RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 SOX12O15370 315 aa23.12■■□□□ 1.29
HCFC1R1-203ENST00000572355 SPON1Q9HCB6 807 aa23.12■■□□□ 1.29
HCFC1R1-203ENST00000572355 WDR17Q8IZU2 1322 aa23.11■■□□□ 1.29
HCFC1R1-203ENST00000572355 L3MBTL2Q969R5 705 aa23.11■■□□□ 1.29
HCFC1R1-203ENST00000572355 CASZ1Q86V15 1759 aa23.1■■□□□ 1.29
HCFC1R1-203ENST00000572355 KCNQ2O43526 872 aa23.1■■□□□ 1.29
HCFC1R1-203ENST00000572355 AXIN2Q9Y2T1 843 aa23.1■■□□□ 1.29
HCFC1R1-203ENST00000572355 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
HCFC1R1-203ENST00000572355 ANO8Q9HCE9 1232 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-203ENST00000572355 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.29
HCFC1R1-203ENST00000572355 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.28
HCFC1R1-203ENST00000572355 PLSCR1O15162 318 aa23.07■■□□□ 1.28
HCFC1R1-203ENST00000572355 CSB-PGBD3P0DP91 1061 aa23.07■■□□□ 1.28
HCFC1R1-203ENST00000572355 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 YY1P25490 414 aa23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 NFAT5O94916 1531 aa23.06■■□□□ 1.28
HCFC1R1-203ENST00000572355 MON2Q7Z3U7 1717 aa23.05■■□□□ 1.28
HCFC1R1-203ENST00000572355 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
HCFC1R1-203ENST00000572355 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
HCFC1R1-203ENST00000572355 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
HCFC1R1-203ENST00000572355 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
HCFC1R1-203ENST00000572355 ZNF692Q9BU19 519 aaPredicted RBP23.03■■□□□ 1.28
HCFC1R1-203ENST00000572355 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
HCFC1R1-203ENST00000572355 CARD10Q9BWT7 1032 aa23.02■■□□□ 1.28
HCFC1R1-203ENST00000572355 BCL9O00512 1426 aa23.01■■□□□ 1.27
HCFC1R1-203ENST00000572355 MYOM1P52179 1685 aa23.01■■□□□ 1.27
HCFC1R1-203ENST00000572355 ABCC6O95255 1503 aa23.01■■□□□ 1.27
HCFC1R1-203ENST00000572355 TNS2Q63HR2 1409 aa23■■□□□ 1.27
HCFC1R1-203ENST00000572355 DCAF8L1A6NGE4 600 aa23■■□□□ 1.27
HCFC1R1-203ENST00000572355 NEUROD1Q13562 356 aa23■■□□□ 1.27
HCFC1R1-203ENST00000572355 PDGFDQ9GZP0 370 aaPredicted RBP23■■□□□ 1.27
HCFC1R1-203ENST00000572355 PROM2Q8N271 834 aa22.99■■□□□ 1.27
HCFC1R1-203ENST00000572355 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
HCFC1R1-203ENST00000572355 CCDC7Q96M83 1385 aa22.99■■□□□ 1.27
HCFC1R1-203ENST00000572355 LTN1O94822 1766 aa22.99■■□□□ 1.27
HCFC1R1-203ENST00000572355 ZBTB7AO95365 584 aa22.98■■□□□ 1.27
HCFC1R1-203ENST00000572355 USP54Q70EL1 1684 aa22.97■■□□□ 1.27
HCFC1R1-203ENST00000572355 EXOC5O00471 708 aa22.97■■□□□ 1.27
HCFC1R1-203ENST00000572355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
HCFC1R1-203ENST00000572355 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
HCFC1R1-203ENST00000572355 STK32BQ9NY57 414 aa22.95■■□□□ 1.26
HCFC1R1-203ENST00000572355 ATF5Q9Y2D1 282 aaPredicted RBP22.92■■□□□ 1.26
HCFC1R1-203ENST00000572355 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
HCFC1R1-203ENST00000572355 ERBB3P21860 1342 aa22.91■■□□□ 1.26
HCFC1R1-203ENST00000572355 NME9Q86XW9 330 aa22.91■■□□□ 1.26
HCFC1R1-203ENST00000572355 ACSBG1Q96GR2 724 aa22.91■■□□□ 1.26
HCFC1R1-203ENST00000572355 USP31Q70CQ4 1352 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 SBNO2Q9Y2G9 1366 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 BTAF1O14981 1849 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 PTGER2P43116 358 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 NLRP2Q9NX02 1062 aa22.9■■□□□ 1.26
HCFC1R1-203ENST00000572355 PAPPAQ13219 1627 aa22.89■■□□□ 1.25
HCFC1R1-203ENST00000572355 TMC1Q8TDI8 760 aa22.88■■□□□ 1.25
HCFC1R1-203ENST00000572355 IL2RBP14784 551 aa22.86■■□□□ 1.25
HCFC1R1-203ENST00000572355 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
HCFC1R1-203ENST00000572355 ANKRD24Q8TF21 1146 aa22.85■■□□□ 1.25
HCFC1R1-203ENST00000572355 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
HCFC1R1-203ENST00000572355 EDC4Q6P2E9 1401 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-203ENST00000572355 FHDC1Q9C0D6 1143 aaPredicted RBP22.84■■□□□ 1.25
HCFC1R1-203ENST00000572355 MTFR1LQ9H019 292 aa22.84■■□□□ 1.25
HCFC1R1-203ENST00000572355 KAT6BQ8WYB5 2073 aa22.82■■□□□ 1.24
HCFC1R1-203ENST00000572355 FAM208AQ9UK61 1670 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-203ENST00000572355 A0A1W2PP64 1363 aa22.82■■□□□ 1.24
HCFC1R1-203ENST00000572355 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
HCFC1R1-203ENST00000572355 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
HCFC1R1-203ENST00000572355 SGIP1Q9BQI5 828 aa22.78■■□□□ 1.24
HCFC1R1-203ENST00000572355 TERF2IPQ9NYB0 399 aa22.78■■□□□ 1.24
HCFC1R1-203ENST00000572355 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
HCFC1R1-203ENST00000572355 DOT1LQ8TEK3 1739 aa22.77■■□□□ 1.23
HCFC1R1-203ENST00000572355 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
HCFC1R1-203ENST00000572355 CHD4Q14839 1912 aa22.75■■□□□ 1.23
HCFC1R1-203ENST00000572355 QSER1Q2KHR3 1735 aa22.75■■□□□ 1.23
HCFC1R1-203ENST00000572355 ARXQ96QS3 562 aa22.75■■□□□ 1.23
HCFC1R1-203ENST00000572355 LRRC4BQ9NT99 713 aa22.75■■□□□ 1.23
HCFC1R1-203ENST00000572355 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
HCFC1R1-203ENST00000572355 RGPD2P0DJD1 1756 aa22.74■■□□□ 1.23
HCFC1R1-203ENST00000572355 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
HCFC1R1-203ENST00000572355 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
HCFC1R1-203ENST00000572355 ZNF784Q8NCA9 323 aaPredicted RBP22.73■■□□□ 1.23
HCFC1R1-203ENST00000572355 IP6K1Q92551 441 aa22.73■■□□□ 1.23
HCFC1R1-203ENST00000572355 SHANK3Q9BYB0 1731 aa22.72■■□□□ 1.23
HCFC1R1-203ENST00000572355 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
HCFC1R1-203ENST00000572355 KLHL34Q8N239 644 aa22.7■■□□□ 1.22
HCFC1R1-203ENST00000572355 MAP3K5Q99683 1374 aa22.69■■□□□ 1.22
HCFC1R1-203ENST00000572355 LY75O60449 1722 aa22.68■■□□□ 1.22
HCFC1R1-203ENST00000572355 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
HCFC1R1-203ENST00000572355 AKT1S1Q96B36 256 aa22.68■■□□□ 1.22
HCFC1R1-203ENST00000572355 COG3Q96JB2 828 aa22.68■■□□□ 1.22
HCFC1R1-203ENST00000572355 AMPHP49418 695 aa22.67■■□□□ 1.22
HCFC1R1-203ENST00000572355 KCNQ4P56696 695 aa22.67■■□□□ 1.22
HCFC1R1-203ENST00000572355 SLC27A3Q5K4L6 730 aa22.67■■□□□ 1.22
HCFC1R1-203ENST00000572355 PUS7Q96PZ0 661 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-203ENST00000572355 MEGF6O75095 1541 aa22.67■■□□□ 1.22
HCFC1R1-203ENST00000572355 UTRNP46939 3433 aa22.66■■□□□ 1.22
HCFC1R1-203ENST00000572355 ANKRD36BQ8N2N9 1353 aa22.66■■□□□ 1.22
HCFC1R1-203ENST00000572355 COL24A1Q17RW2 1714 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms