RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
CTDNEP1-205ENST00000570828 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
CTDNEP1-205ENST00000570828 CPDO75976 1380 aa17.54■□□□□ 0.4
CTDNEP1-205ENST00000570828 LHX8Q68G74 356 aa17.54■□□□□ 0.4
CTDNEP1-205ENST00000570828 NLRP6P59044 892 aa17.53■□□□□ 0.4
CTDNEP1-205ENST00000570828 GCP02774 474 aa17.52■□□□□ 0.4
CTDNEP1-205ENST00000570828 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
CTDNEP1-205ENST00000570828 EVA1CP58658 441 aa17.51■□□□□ 0.39
CTDNEP1-205ENST00000570828 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
CTDNEP1-205ENST00000570828 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
CTDNEP1-205ENST00000570828 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
CTDNEP1-205ENST00000570828 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
CTDNEP1-205ENST00000570828 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 CPSF1Q10570 1443 aaKnown RBP17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 SLIT3O75094 1523 aa17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
CTDNEP1-205ENST00000570828 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
CTDNEP1-205ENST00000570828 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
CTDNEP1-205ENST00000570828 THSD7AQ9UPZ6 1657 aa17.47■□□□□ 0.39
CTDNEP1-205ENST00000570828 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
CTDNEP1-205ENST00000570828 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
CTDNEP1-205ENST00000570828 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
CTDNEP1-205ENST00000570828 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
CTDNEP1-205ENST00000570828 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
CTDNEP1-205ENST00000570828 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
CTDNEP1-205ENST00000570828 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
CTDNEP1-205ENST00000570828 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
CTDNEP1-205ENST00000570828 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
CTDNEP1-205ENST00000570828 KCNH5Q8NCM2 988 aa17.44■□□□□ 0.38
CTDNEP1-205ENST00000570828 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
CTDNEP1-205ENST00000570828 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
CTDNEP1-205ENST00000570828 SOX12O15370 315 aa17.42■□□□□ 0.38
CTDNEP1-205ENST00000570828 BAG6P46379 1132 aa17.42■□□□□ 0.38
CTDNEP1-205ENST00000570828 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
CTDNEP1-205ENST00000570828 THRAP3Q9Y2W1 955 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-205ENST00000570828 CRB1P82279 1406 aa17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
CTDNEP1-205ENST00000570828 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
CTDNEP1-205ENST00000570828 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
CTDNEP1-205ENST00000570828 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
CTDNEP1-205ENST00000570828 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.38
CTDNEP1-205ENST00000570828 MON2Q7Z3U7 1717 aa17.39■□□□□ 0.37
CTDNEP1-205ENST00000570828 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
CTDNEP1-205ENST00000570828 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
CTDNEP1-205ENST00000570828 TESK2Q96S53 571 aa17.39■□□□□ 0.37
CTDNEP1-205ENST00000570828 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
CTDNEP1-205ENST00000570828 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
CTDNEP1-205ENST00000570828 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
CTDNEP1-205ENST00000570828 USP31Q70CQ4 1352 aa17.38■□□□□ 0.37
CTDNEP1-205ENST00000570828 USP47Q96K76 1375 aa17.38■□□□□ 0.37
CTDNEP1-205ENST00000570828 NFAT5O94916 1531 aa17.37■□□□□ 0.37
CTDNEP1-205ENST00000570828 NME9Q86XW9 330 aa17.37■□□□□ 0.37
CTDNEP1-205ENST00000570828 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
CTDNEP1-205ENST00000570828 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
CTDNEP1-205ENST00000570828 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
CTDNEP1-205ENST00000570828 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
CTDNEP1-205ENST00000570828 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
CTDNEP1-205ENST00000570828 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
CTDNEP1-205ENST00000570828 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
CTDNEP1-205ENST00000570828 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
CTDNEP1-205ENST00000570828 TRIM37O94972 964 aa17.34■□□□□ 0.37
CTDNEP1-205ENST00000570828 ABCC6O95255 1503 aa17.34■□□□□ 0.37
CTDNEP1-205ENST00000570828 COL18A1P39060 1754 aa17.33■□□□□ 0.37
CTDNEP1-205ENST00000570828 TMF1P82094 1093 aa17.33■□□□□ 0.36
CTDNEP1-205ENST00000570828 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
CTDNEP1-205ENST00000570828 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
CTDNEP1-205ENST00000570828 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
CTDNEP1-205ENST00000570828 OVOS2A0A0J9YW53 1432 aa17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 OVOS2Q6IE36 1432 aa17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 PARP4Q9UKK3 1724 aaKnown RBP17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 DDB1Q16531 1140 aa17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 CARD10Q9BWT7 1032 aa17.31■□□□□ 0.36
CTDNEP1-205ENST00000570828 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
CTDNEP1-205ENST00000570828 CLCN6P51797 869 aa17.3■□□□□ 0.36
CTDNEP1-205ENST00000570828 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
CTDNEP1-205ENST00000570828 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
CTDNEP1-205ENST00000570828 APBA3O96018 575 aa17.29■□□□□ 0.36
CTDNEP1-205ENST00000570828 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
CTDNEP1-205ENST00000570828 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
CTDNEP1-205ENST00000570828 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
CTDNEP1-205ENST00000570828 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
CTDNEP1-205ENST00000570828 ERBB3P21860 1342 aa17.27■□□□□ 0.36
CTDNEP1-205ENST00000570828 EZH2Q15910 746 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-205ENST00000570828 COG3Q96JB2 828 aa17.27■□□□□ 0.36
CTDNEP1-205ENST00000570828 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
CTDNEP1-205ENST00000570828 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
CTDNEP1-205ENST00000570828 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
CTDNEP1-205ENST00000570828 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
CTDNEP1-205ENST00000570828 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
CTDNEP1-205ENST00000570828 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
CTDNEP1-205ENST00000570828 TNS2Q63HR2 1409 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms