RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
TRIM25-204ENST00000570749 LTN1O94822 1766 aa13.66□□□□□ -0.22
TRIM25-204ENST00000570749 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
TRIM25-204ENST00000570749 ARHGEF25Q86VW2 580 aa13.66□□□□□ -0.22
TRIM25-204ENST00000570749 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
TRIM25-204ENST00000570749 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
TRIM25-204ENST00000570749 WDR17Q8IZU2 1322 aa13.65□□□□□ -0.22
TRIM25-204ENST00000570749 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
TRIM25-204ENST00000570749 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
TRIM25-204ENST00000570749 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 DEFB132Q7Z7B7 95 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 LRP5O75197 1615 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 OVOS2A0A0G2JMS6 1433 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
TRIM25-204ENST00000570749 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
TRIM25-204ENST00000570749 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
TRIM25-204ENST00000570749 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
TRIM25-204ENST00000570749 RREB1Q92766 1687 aa13.63□□□□□ -0.23
TRIM25-204ENST00000570749 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
TRIM25-204ENST00000570749 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
TRIM25-204ENST00000570749 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
TRIM25-204ENST00000570749 TESK2Q96S53 571 aa13.62□□□□□ -0.23
TRIM25-204ENST00000570749 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
TRIM25-204ENST00000570749 USP47Q96K76 1375 aa13.61□□□□□ -0.23
TRIM25-204ENST00000570749 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
TRIM25-204ENST00000570749 TMF1P82094 1093 aa13.61□□□□□ -0.23
TRIM25-204ENST00000570749 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
TRIM25-204ENST00000570749 BCL9O00512 1426 aa13.61□□□□□ -0.23
TRIM25-204ENST00000570749 ANKRD36BQ8N2N9 1353 aa13.6□□□□□ -0.23
TRIM25-204ENST00000570749 DDB1Q16531 1140 aa13.6□□□□□ -0.23
TRIM25-204ENST00000570749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM25-204ENST00000570749 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
TRIM25-204ENST00000570749 TRIM37O94972 964 aa13.58□□□□□ -0.24
TRIM25-204ENST00000570749 CSB-PGBD3P0DP91 1061 aa13.58□□□□□ -0.24
TRIM25-204ENST00000570749 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
TRIM25-204ENST00000570749 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
TRIM25-204ENST00000570749 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
TRIM25-204ENST00000570749 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
TRIM25-204ENST00000570749 NME9Q86XW9 330 aa13.57□□□□□ -0.24
TRIM25-204ENST00000570749 ERBB3P21860 1342 aa13.57□□□□□ -0.24
TRIM25-204ENST00000570749 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
TRIM25-204ENST00000570749 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
TRIM25-204ENST00000570749 APBA3O96018 575 aa13.56□□□□□ -0.24
TRIM25-204ENST00000570749 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
TRIM25-204ENST00000570749 SOX12O15370 315 aa13.55□□□□□ -0.24
TRIM25-204ENST00000570749 COG3Q96JB2 828 aa13.55□□□□□ -0.24
TRIM25-204ENST00000570749 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
TRIM25-204ENST00000570749 EXOC5O00471 708 aa13.53□□□□□ -0.24
TRIM25-204ENST00000570749 PLSCR1O15162 318 aa13.53□□□□□ -0.24
TRIM25-204ENST00000570749 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
TRIM25-204ENST00000570749 NBPF14Q5TI25 921 aa13.53□□□□□ -0.24
TRIM25-204ENST00000570749 MYOM1P52179 1685 aa13.53□□□□□ -0.24
TRIM25-204ENST00000570749 NHSQ6T4R5 1651 aa13.53□□□□□ -0.24
TRIM25-204ENST00000570749 IP6K1Q92551 441 aa13.52□□□□□ -0.25
TRIM25-204ENST00000570749 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
TRIM25-204ENST00000570749 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
TRIM25-204ENST00000570749 IL2RBP14784 551 aa13.51□□□□□ -0.25
TRIM25-204ENST00000570749 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
TRIM25-204ENST00000570749 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
TRIM25-204ENST00000570749 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
TRIM25-204ENST00000570749 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
TRIM25-204ENST00000570749 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
TRIM25-204ENST00000570749 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
TRIM25-204ENST00000570749 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
TRIM25-204ENST00000570749 HOXC9P31274 260 aa13.47□□□□□ -0.25
TRIM25-204ENST00000570749 AMPHP49418 695 aa13.47□□□□□ -0.25
TRIM25-204ENST00000570749 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
TRIM25-204ENST00000570749 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
TRIM25-204ENST00000570749 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
TRIM25-204ENST00000570749 FYB1O15117 783 aa13.46□□□□□ -0.25
TRIM25-204ENST00000570749 KAT6BQ8WYB5 2073 aa13.45□□□□□ -0.26
TRIM25-204ENST00000570749 BTAF1O14981 1849 aa13.45□□□□□ -0.26
TRIM25-204ENST00000570749 FLT4P35916 1363 aa13.45□□□□□ -0.26
TRIM25-204ENST00000570749 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
TRIM25-204ENST00000570749 RGPD2P0DJD1 1756 aa13.44□□□□□ -0.26
TRIM25-204ENST00000570749 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
TRIM25-204ENST00000570749 INSRP06213 1382 aa13.44□□□□□ -0.26
TRIM25-204ENST00000570749 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM25-204ENST00000570749 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
TRIM25-204ENST00000570749 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
TRIM25-204ENST00000570749 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
TRIM25-204ENST00000570749 CASZ1Q86V15 1759 aa13.42□□□□□ -0.26
TRIM25-204ENST00000570749 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
TRIM25-204ENST00000570749 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
TRIM25-204ENST00000570749 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
TRIM25-204ENST00000570749 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
TRIM25-204ENST00000570749 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
TRIM25-204ENST00000570749 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
TRIM25-204ENST00000570749 PAPPAQ13219 1627 aa13.39□□□□□ -0.27
TRIM25-204ENST00000570749 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
TRIM25-204ENST00000570749 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
TRIM25-204ENST00000570749 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
TRIM25-204ENST00000570749 NSD2O96028 1365 aa13.39□□□□□ -0.27
TRIM25-204ENST00000570749 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
TRIM25-204ENST00000570749 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
TRIM25-204ENST00000570749 LY75O60449 1722 aa13.38□□□□□ -0.27
TRIM25-204ENST00000570749 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
TRIM25-204ENST00000570749 MEGF6O75095 1541 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms